A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{EPg}CG3097HP10141 Insertion

General Information
Symbol Dmel\P{EPg}CG3097HP10141 Species D. melanogaster
Name FlyBase ID FBti0075199
Feature type transposable_element_insertion_site
Description
Inserted element P{EPg} Expression data
Affected gene(s) CG3097 Viability / fertility
Causes allele(s) CG3097HP10141 Stock availability 1 publicly available
LINE ID HP10141
Genomic Location
Chromosomal location X ( 5C2 ) Sequence location X:5,664,770..5,664,770 [-]
Map ( GBrowse ) detailed view FBti0131873 FBti0057664 FBti0007303 FBti0042976 FBti0070152 FBti0075199 FBti0054045 FBti0100366 FBti0068753 FBti0100881
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Description
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FB2012_01
FB2011_10
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Chromosome (arm)
Sequence Location
X:5,664,770..5,664,770 [-]
Orientation
Cytological location
(computed by FlyBase)
5C2 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
Comments concerning
location
The location specified is that of the genomic sequence nucleotide that aligns with the 5' end of the flanking sequence deposited by Staudt et al. (2005) in GenBank. The GenBank records do not specify the position of the insertion within the flanking sequence so there is ambiguity in the insertion position.
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Flanking sequence
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Construct P{EPg}
Location-dependent
role
mobile activating element (UASG)
Size 8.057Kb
Associated alleles
Molecular map
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Insertion may
affect gene
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Causes alleles
Lethality
References
Sterility
References
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Statement
Reference
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Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
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FlyView (LinkOut)
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Line ID
HP10141
Origin as a multiple insertion line
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Aberration
Balancer
hide Stocks ( 1 )
Bloomington
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Reported As
Symbol Synonym
HP10141
P{EPg}CG3097HP10141
P{EPg}HP10141
Secondary FlyBase IDs
hide References ( 6 )
Research paper
Staudt et al., 2005, PLoS Gen. 1(4): 499--506
Gain-of-function screen for genes that affect Drosophila muscle pattern formation. [FBrf0191391]
Mata et al., 2000, Cell 101(5): 511--522
Tribbles coordinates mitosis and morphogenesis in Drosophila by regulating string/CDC25 proteolysis. [FBrf0128569]
Supplementary material
Staudt et al., 2005, PLoS Genet. 1(4):
Table S2. [FBrf0208297]
Personal communication to FlyBase
Levis, 2009.8.13, Release 5 sequence localizations for HP and DP lines.
Release 5 sequence localizations for HP and DP lines. [FBrf0208533]
Matthews, 2008.4.15, DP and HP P-element insertions submitted to the Bloomington Drosophila Stock Center.
DP and HP P-element insertions submitted to the Bloomington Drosophila Stock Center. [FBrf0204789]
FlyBase analysis
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]