A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\P{PTT-GC}zipCC01626 Insertion

General Information
Symbol Dmel\P{PTT-GC}zipCC01626 Species D. melanogaster
Name FlyBase ID FBti0099952
Feature type transposable_element_insertion_site
Description
Inserted element P{PTT-GC} Expression data
Affected gene(s) Avic\GFP, zip Viability / fertility
Causes allele(s) Avic\GFPzip-CC01626, zipCC01626 Stock availability none publicly available
LINE ID
Genomic Location
Chromosomal location 2R ( 60E12 ) Sequence location 2R:20,896,845..20,896,845 [-]
Map ( GBrowse ) GBrowse View Help detailed view FBti0143534 FBti0143064 FBti0143667 FBti0053564 FBti0099952 FBti0005226 FBti0102340 FBti0108492 FBti0110963 FBti0026313 FBti0007719 FBti0055898 FBti0125437_2 FBti0125437_1 FBti0067115 FBti0007775 FBti0104033 FBti0110106 FBti0036965 FBti0125438_1 FBti0125438_2 FBti0067691 FBti0046700 FBti0067694 FBti0051114 FBti0043207 FBti0066644 FBti0036247 FBti0125439 FBti0147303
Member of Large Scale Dataset(s)
Dataset
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
2R:20,896,845..20,896,845 [-]
(Buszczak et al., 2007)
Orientation
-
(Buszczak et al., 2007)
Cytological location
(computed by FlyBase)
60E12 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
Comments concerning
location
hide Sequence Data
Flanking sequence
hide Inserted Element
Construct P{PTT-GC}
Location-dependent
role
GFP gene trap
(Morin et al., 2001)
Size 5.956Kb
Associated alleles
Avic\GFPGC.T:Zzzz\His6
w+*
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
Avic\GFP
(Buszczak et al., 2007)
zip
(Buszczak et al., 2007)
hide Alleles and Phenotypes
Causes alleles
Avic\GFPzip-CC01626
(Buszczak et al., 2007)
zipCC01626
(Buszczak et al., 2007)
Lethality
References
lethal
(Buszczak et al., 2007)
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 0 )
hide Linkouts
hide Comments
Protein trap line.
(Buszczak et al., 2007)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
CC01626
(Buszczak et al., 2007)
P{PTT-GC}zipCC01626
(FlyBase, 1992-)
Secondary FlyBase IDs
hide References ( 3 )
Research paper
Buszczak et al., 2007, Genetics 175(3): 1505--1531
The Carnegie protein trap library: A versatile tool for Drosophila developmental studies. [FBrf0200345]
Morin et al., 2001, Proc. Natl. Acad. Sci. U.S.A. 98(26): 15050--15055
A protein trap strategy to detect GFP-tagged proteins expressed from their endogenous loci in Drosophila. [FBrf0141725]
FlyBase analysis
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]