A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\P{CaryP}attP16 Insertion

General Information
Symbol Dmel\P{CaryP}attP16 Species D. melanogaster
Name FlyBase ID FBti0114369
Feature type transposable_element_insertion_site
Description
Inserted element P{CaryP} Expression data
Affected gene(s) Viability / fertility
Causes allele(s) Stock availability none publicly available
LINE ID
Genomic Location
Chromosomal location 2R ( 53C4 ) Sequence location 2R:12,273,993..12,273,993
Map ( GBrowse ) GBrowse View Help detailed view FBti0062564 FBti0146292 FBti0104512 FBti0034762 FBti0116248 FBti0109191 FBti0104910 FBti0110987 FBti0054202 FBti0029134 FBti0111985 FBti0059024 FBti0021168 FBti0102264 FBti0010980 FBti0109206 FBti0058890 FBti0029889 FBti0059296 FBti0102763 FBti0110192 FBti0103462 FBti0113427 FBti0035296 FBti0108415 FBti0011176 FBti0010819 FBti0003933 FBti0109855 FBti0036473 FBti0103356 FBti0026262 FBti0108601 FBti0010809 FBti0035253 FBti0104259 FBti0105260 FBti0029565 FBti0109129 FBti0113298 FBti0113300 FBti0028707 FBti0011238 FBti0007633 FBti0110274 FBti0035472 FBti0109591 FBti0072433 FBti0114369 FBti0112350 FBti0034301 FBti0141155 FBti0108754 FBti0055849 FBti0034241 FBti0112162 FBti0006858 FBti0107424 FBti0113086 FBti0069085 FBti0034215 FBti0036863 FBti0055783 FBti0107936 FBti0006709 FBti0103783 FBti0111389 FBti0033755 FBti0110593 FBti0107719 FBti0070455 FBti0109225
Member of Large Scale Dataset(s)
Dataset
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Description
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FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
2R:12,273,993..12,273,993
Orientation
Cytological location
(computed by FlyBase)
53C4 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
53C4 (reported as inferred from sequence location)
Comments concerning
location
hide Sequence Data
Flanking sequence
hide Inserted Element
Construct P{CaryP}
Location-dependent
role
carries attP site(s)
Size
Associated alleles
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
hide Alleles and Phenotypes
Causes alleles
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 0 )
hide Linkouts
hide Comments
phiC31\attP docking site for phiC31\int mediated integration into the genome.
Intergenic: flanked by CG15711 and CG33960.
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
P{CaryP}attP16
Secondary FlyBase IDs
hide References ( 7 )
Research paper
Chatterjee and Bohmann, 2012, PLoS ONE 7(4): e34063
A Versatile ΦC31 Based Reporter System for Measuring AP-1 and Nrf2 Signaling in Drosophila and in Tissue Culture. [FBrf0218067]
Pfeiffer et al., 2010, Genetics 186(2): 735--755
Refinement of tools for targeted gene expression in Drosophila. [FBrf0212052]
Markstein et al., 2008, Nat. Genet. 40(4): 476--483
Exploiting position effects and the gypsy retrovirus insulator to engineer precisely expressed transgenes. [FBrf0204436]
Groth et al., 2004, Genetics 166(4): 1775--1782
Construction of Transgenic Drosophila by Using the Site-Specific Integrase From Phage {phi}C31. [FBrf0174693]
Supplementary material
Markstein et al., 2008, Nat. Genet. 40(4):
Supplementary Text and Figures. [FBrf0210945]
Personal communication to FlyBase
Spokony and White, 2012.5.22, Spokony insertions.
Spokony insertions. [FBrf0218453]
FlyBase analysis
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]