FlyBase Insertion Report: Dmel\P{3'WP-2,w[var]}2Lt

General Information

Symbol

Dmel\P{3'WP-2,w^var}2Lt

Species

D. melanogaster

Name

FlyBase ID

FBti0115743

Feature type

transposable_element_insertion_site

Also Known As

P{w^var}

Description

Inserted Element

P{3'WP-2,w^var}

Uses

Affected gene(s)

Viability / fertility

Associated allele(s)

w^var

Stock availability

None publicly available

LINE ID

Genomic Location

Chromosomal Location

2Lt

Sequence Location

Target / Docking site

Member of Large Scale Dataset(s)

Dataset

Description

Detailed Mapping Data

Chromosome (arm)

Sequence Location

Orientation

(Golubovsky et al., 2001, Mason et al., 2000)

Cytological location (computed by FlyBase)

Cytological location (reported)

Insertion into Natural transposon

Comments concerning location

Sequence Data

Flanking sequence

Inserted Element

Construct

P{3'WP-2,w^var}

Location-dependent role

Size (Kb)

Associated alleles

Molecular map

Affected Gene(s)

Insertion may affect gene

(Mason et al., 2004, Biessmann and Mason, 2003, Mason et al., 2003, Golubovsky et al., 2001, Mason et al., 2000)

Alleles and Phenotypes

Allele

w^var

Reference(s)

(Mason et al., 2004, Biessmann and Mason, 2003, Mason et al., 2003, Golubovsky et al., 2001, Mason et al., 2000)

Phenotype Data

Phenotypic Class Phenotype Manifest in Detailed Description

Expression Data

Reporter Expression

Additional Information

Statement

Reference

Marker for

Reflects expression of

Reporter construct used in assay

Data on Genetic Line

Line ID

Origin as a multiple insertion line

Progenitor(s) within the Genome

Related Aberration or Balancer

Aberration

Balancer

Stocks (0)

External Crossreferences and Linkouts ( 0 )

Comments

The last 4bp of the 3\' P-element inverted repeat (CATG) are missing. The 3\' end of the P-element sequences are directly attached to nucleotide 24 of the 2L TAS. 597bp of w sequences and all the 5\' P-element terminal repeat sequences are missing. A HeT-A element is attached with its oligo(A) tail directly to nucleotide 5184 in the w sequence (coordinates according to X02974), leaving the eye-enhancer region intact.

(Golubovsky et al., 2001)

The P{3\'WP-2}w^var insertion is in the 2L telomere, between a short HeT-A array composed of two truncated HeT-A elements distally and TAS sequences proximally. Since the 5\' P-element sequences have been lost, the 3\' end of the first flanking HeT-A element is attached directly upstream of the w eye enhancer in the P{3\'WP-2}w^var insertion.

(Mason et al., 2000)

Synonyms and Secondary IDs (5)

Reported As

Symbol Synonym

P{3''WP-2,w^var}2Lt

(Golubovsky et al., 2001)

P{3''WP-2}w^var

(Mason et al., 2000)

P{3'WP-2,w^var}2Lt

(FlyBase, 1992-)

P{3'WP-2}w^var

(FlyBase, 1992-)

P{w^var}

(Mason et al., 2004, Biessmann and Mason, 2003, Mason et al., 2003, Golubovsky et al., 2001, Mason et al., 2000)

Name Synonyms

Secondary FlyBase IDs

FBti0018268
FBti0074121

References (6)

Report Sections

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