A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\P{EP}CG42724G19164 Insertion

General Information
Symbol Dmel\P{EP}CG42724G19164 Species D. melanogaster
Name FlyBase ID FBti0130163
Feature type transposable_element_insertion_site
Description
Inserted element P{EP} Expression data
Affected gene(s) CG42724 Viability / fertility viable
Causes allele(s) CG42724G19164 Stock availability 1 publicly available
LINE ID G19164
Genomic Location
Chromosomal location 3R ( 83E4 ) Sequence location 3R:2,193,521..2,193,521 [+]
Map ( GBrowse ) GBrowse View Help detailed view FBti0063889 FBti0065767 FBti0065378 FBti0040991 FBti0065520 FBti0045214 FBti0149026 FBti0130163 FBti0108367 FBti0125932_1 FBti0125932_2 FBti0035250 FBti0110822 FBti0024575 FBti0109366 FBti0058047 FBti0107881 FBti0107028 FBti0104591 FBti0125933_2 FBti0125933_1 FBti0143497 FBti0041502
Member of Large Scale Dataset(s)
Dataset

A set of transgenic insertion stocks derived by TE mobilization using the using the P-element construct P{EP}. The P{EP} construct construct carries a w[+mC] mini-white visible marker, Scer\UAS binding sites for the Scer\GAL4 transcriptional regulator, and bacterial sequences that allow plasmid rescue (FBrf0090768). The GAL4-UAS system allows regulated expression of genes proximate to the site of the insertion: genes properly oriented with respect to the Scer\UAS sequences can be conditionally expressed via transgene-derived Scer\GAL4 activity.
(Bellen et al., 2011)
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Description
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FB2013_03
FB2013_02
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Chromosome (arm)
Sequence Location
3R:2,193,521..2,193,521 [+]
(Bellen, 2010.7.14)
Orientation
Cytological location
(computed by FlyBase)
83E4 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
83E4 (reported as inferred from sequence location)
(Bellen, 2010.7.14)
Comments concerning
location
hide Sequence Data
Flanking sequence
HN153740
(Bellen, 2010.7.14)
hide Inserted Element
Construct P{EP}
Location-dependent
role
mobile activating element (UASG)
(Rorth, 1996)
Size 7.987Kb
Associated alleles
Scer\UAS14x.hs
TrlBRcRa
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
CG42724
(Bellen, 2010.7.14)
hide Alleles and Phenotypes
Causes alleles
CG42724G19164
(Bellen, 2010.7.14)
Lethality
References
viable
(Bellen, 2010.7.14)
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
G19164
(Bellen, 2010.7.14)
Origin as a multiple insertion line
N
(Bellen, 2010.7.14)
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
31842
w1118; P{EP}CG42724G19164/TM6C, Sb1
hide Linkouts
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
P{EP}CG33097G19164
(Bellen, 2010.7.14)
P{EP}CG42724G19164
 
Secondary FlyBase IDs
hide References ( 7 )
Research paper
Bellen et al., 2011, Genetics 188(3): 731--743
The Drosophila gene disruption project: progress using transposons with distinctive site specificities. [FBrf0214229]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Rorth, 1996, Proc. Natl. Acad. Sci. U.S.A. 93(22): 12418--12422
A modular misexpression screen in Drosophila detecting tissue-specific phenotypes. [FBrf0090768]
Personal communication to FlyBase
Bellen, 2010.7.14, BDGP_2010_0715.GenExel.xml
BDGP_2010_0715.GenExel.xml [FBrf0211255]
FlyBase analysis
FlyBase Curators, 2013, Members of TE insertion collections.
Members of TE insertion collections. [FBrf0220668]
FlyBase Curators, 2008, Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations.
Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations. [FBrf0202955]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]