A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\Mi{MIC}Socs36EMI02672 Insertion

General Information
Symbol Dmel\Mi{MIC}Socs36EMI02672 Species D. melanogaster
Name FlyBase ID FBti0143166
Feature type transposable_element_insertion_site
Description
Inserted element Mi{MIC} Expression data
Affected gene(s) Socs36E Viability / fertility
Causes allele(s) Socs36EMI02672 Stock availability 1 publicly available
LINE ID MI02672
Genomic Location
Chromosomal location 2L ( 36E6 ) Sequence location 2L:18,145,918..18,145,918 [+]
Map ( GBrowse ) GBrowse View Help detailed view FBti0148736 FBti0014484 FBti0111265 FBti0021293 FBti0066935 FBti0131736 FBti0039357 FBti0127847 FBti0026196 FBti0059266 FBti0143166 FBti0036418 FBti0124846 FBti0028469 FBti0115145 FBti0103913
Member of Large Scale Dataset(s)
Dataset

A set of transgenic insertion stocks derived by TE mobilization using the Dhyd\Minos-based construct Mi{MIC}; created and vetted by the Gene Disruption Project (GDP). The Mi{MIC} construct carries the mini-yellow marker y[+mDint2] and Avic\GFP (a fluorescent marker) associated with a mutagenic gene-trap cassette. Two phiC31\attP sites are located immediately within the Dhyd\Minos termini, flanking the EGFP and yellow markers, allowing replacement with DNA of interest using Recombination Mediated Cassette Exchange (RMCE) methodology.
(Venken et al., 2011)
hide Recent Updates
Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
Update Feed
Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
atom feed
FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
2L:18,145,918..18,145,918 [+]
(Bellen, 2011.5.31)
Orientation
Cytological location
(computed by FlyBase)
36E6 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
36E6 (reported as inferred from sequence location)
(Bellen, 2011.5.31)
Comments concerning
location
hide Sequence Data
Flanking sequence
JM113839
(Bellen, 2011.5.31)
hide Inserted Element
Construct Mi{MIC}
Location-dependent
role
GFP gene trap
(Venken et al., 2009.12.19)
carries attP site(s)
(Venken et al., 2009.12.19)
Size 7.267, 7.267Kb
Associated alleles
y+mDint2
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
Socs36E
(Bellen, 2011.5.31)
hide Alleles and Phenotypes
Causes alleles
Socs36EMI02672
(Bellen, 2011.5.31)
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
MI02672
(Bellen, 2011.5.31)
Origin as a multiple insertion line
N
(Bellen, 2011.5.31)
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
35896
y1 w*; Mi{MIC}Socs36EMI02672
hide Linkouts
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
Mi{MIC}Socs36EMI02672
(Bellen, 2011.5.31, )
Secondary FlyBase IDs
hide References ( 5 )
Research paper
Venken et al., 2011, Nat. Methods 8(9): 737--743
MiMIC: a highly versatile transposon insertion resource for engineering Drosophila melanogaster genes. [FBrf0216331]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Personal communication to FlyBase
Bellen, 2011.5.31, set938.xml
set938.xml [FBrf0213719]
Venken et al., 2009.12.19, MIMIC transposable element ("Minos Mediated Integration Casette")
MIMIC transposable element ("Minos Mediated Integration Casette") [FBrf0209655]
FlyBase analysis
FlyBase Curators, 2013, Members of GDP insertion collections: P{GT1}, P{SUPor-P}, P{EPgy2}, Mi{ET1}, Mi{MIC}.
Members of GDP insertion collections: P{GT1}, P{SUPor-P}, P{EPgy2}, Mi{ET1}, Mi{MIC}. [FBrf0220667]