FB2025_01 , released February 20, 2025
Insertion: Dmel\Mi{PT-GFSTF.2}MI06307
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General Information
Symbol
Dmel\Mi{PT-GFSTF.2}MI06307
Species
D. melanogaster
Name
FlyBase ID
FBti0178292
Description
Inserted Element
LINE ID

MI06307-GFSTF.2

Affected gene(s)
Viability / fertility
Associated allele(s)
Stock availability
Genomic Location
Chromosomal Location
3L ( 76C2_r6 )
Sequence Location
Target / Docking site
Member of Large Scale Dataset(s)
Description

A set of transgenic insertion stocks containing a protein trap cassette, derived from Mi{MIC} insertions in coding introns using Recombinase-Mediated Cassette Exchange (RMCE); see http://flypush.imgen.bcm.tmc.edu/pscreen/technique.html. The protein trap cassette contains a EGFP-FlAsH-StrepII-TEV-3xFlag ("GFSTF") tag that is flanked on either side with a 4X(GlyGlySer) flexible linker; the mini-yellow marker is no longer present. Each insertion line contains one of three versions of the cassette (Mi{PT-GFSTF.0}, Mi{PT-GFSTF.1} or Mi{PT-GFSTF.2}), depending on the reading frame required to generate an in-frame fusion protein with the gene in which the insertion is located. This system also allows UAS/GAL4-based knockdown strategies targeting GFP-sequence containing mRNA (RNAi against GFP) or GFP fusion protein (deGradFP).

Detailed Mapping Data
Chromosome (arm)
Sequence Location
Orientation
Cytological location (computed by FlyBase)
Cytological location (reported)
76C2_r6 (reported as inferred from sequence location)
Insertion into Natural transposon
Comments concerning location
Sequence Data
Flanking sequence
Inserted Element
Size (Kb)
Component Allele(s)
Molecular map
Affected Gene(s)
Phenotypic Data
Associated Allele
Phenotypic Data
Expression Data
Reporter Expression
Additional Information
Statement
Reference
 
Marker for
Reflects expression of
Reporter construct used in assay
Data on Genetic Line
Line ID
Origin as a multiple insertion line
Progenitor(s) within the Genome
Related Aberration or Balancer
Aberration
Balancer
Stocks (1)
External Crossreferences and Linkouts ( 1 )
Linkouts
GDP-RMCE
  • RM00184
Comments
Comments

The parent MI06307 MiMIC line contains a single insertion, but the flanking sequence matches a duplicated region of the reference genome. Both flanks align equally well at two sites: 3L:19716031 (-) (release 6) in a coding intron of the Trpml gene and at 3L:19747447 (-) in a coding intron of the CG42638 gene and an intron in the 5' UTR of the CG42637 gene. Thus there are two possible locations for the parent MI06307 MiMIC line, 31kb apart and it is not known to which location the RMCE-derived Mi{PT-GFSTF.2}MI06307 line maps, or which of Trpml or CG42638 the Mi{PT-GFSTF.2}MI06307 line is predicted to protein trap.

Chromosome is homozygous lethal.

Synonyms and Secondary IDs (1)
Reported As
Symbol Synonym
Name Synonyms
Secondary FlyBase IDs
    References (2)