A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Recombinant construct P{CaSpeR-4}

General Information
Symbol P{CaSpeR-4} FlyBase ID FBtp0000163
Feature type transgenic_transposon
Size 5.103 Expression data
Associated insertions 0 available
Molecular map
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Description
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FB2013_03
FB2013_02
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hide Description & Uses
Species synthetic construct
Location-dependent
role
Description
CV term
Qualifiers & info
Reference
transposon
Uses
CV term
Qualifiers & info
Reference
carrier transposon
Cloning Sites
Location
Restriction sites
Reference
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Sequence (FB) FlyBase-compiled
Associated Sequence Data
DDBJ /
EMBL /
GenBank
DNA sequence
Extent
 
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Total Size
5.103
Left end
Right end
Segments
Number
Orientation
Symbol
2
Reference (Thummel and Pirrotta, 1991)
hide Features
CV term
Qualifiers & info
Reference
partial
rescue
hide Component Alleles
Allele w+mC
Reference(s) (Pirrotta, 1988, Qian and Pirrotta, 1995, Thummel and Pirrotta, 1991, Qian et al., 1991, Cuvier et al., 1998, Bhadra et al., 1997)
Molecular data
Minigene of the white cDNA.
4.15kb SpeI fragment of the w gene that carries a deletion of a large part of the first intron and the regulatory region is reduced to 300bp preceding the transcription start site.
Construct: A 'mini-white' gene constructed by deletion of the HindIII-XbaI fragment from the long 5' intron. Carried by the Casper series of vectors.
 
Phenotypic class
Phenotype manifest in
Other information
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Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects expression of
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progenitor(s)
descendant(s)
hide Comments
construct_comment: Good map of pP{CaSpeR} shown in Figure 5 in FBrf0068634.
construct_comment: One of a series of transposons based upon P{CaSpeR} and differing in cloning sites (cloning sites listed in construct reports).
report comment: Compiled sequence initiates at different position and is in opposite orientation relative to sequence entry listed. See also report for component segment w+mC4.1(Sp): sequence discrepancies.
hide Stocks Listed in FlyBase ( 0 )
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Other Crossreferences
Linkouts
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
P{w+mC</up>=CaSpeR-4}
P{w+mC=CaSpeR-4}
Secondary FlyBase IDs
hide References ( 10 )
Research paper
Metaxakis et al., 2005, Genetics 171(2): 571--581
Minos as a genetic and genomic tool in Drosophila melanogaster. [FBrf0190750]
Cuvier et al., 1998, Mol. Cell. Biol. 18(12): 7478--7486
Identification of a class of chromatin boundary elements. [FBrf0105485]
Bhadra et al., 1997, Mol. Gen. Genet. 254(6): 621--634
A trans-acting modifier causing extensive overexpression of genes in Drosophila melanogaster. [FBrf0094159]
Qian and Pirrotta, 1995, Genetics 139(2): 733--744
Dosage compensation of the Drosophila white gene requires both the X chromosome environment and multiple intragenic elements. [FBrf0080335]
Petersen et al., 1994, Genetics 136(1): 173--182
forked proteins are components of fiber bundles present in developing bristles of Drosophila melanogaster. [FBrf0068634]
Thummel and Pirrotta, 1992, D. I. S. 71: 150
Technical notes: new pCasper P-element vectors. [FBrf0082699]
Qian et al., 1991, EMBO J. 10: 1415--1425
The bx region enhancer, a distant cis-control element of the Drosophila Ubx gene and its regulation by hunchback and other segmentation genes. [FBrf0053871]
Thummel and Pirrotta, 1991, D. I. N. 2:
Technical Notes: New pCaSpeR P-element vectors. [FBrf0053508]
FlyBase analysis
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]
DNA/RNA sequence record
Pirrotta, 1994.9.14, GenBank/EMBL/DDBJ: X81645
D.melanogaster P element CaSpeR-4 gene. [FBrf0172391]