A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Recombinant construct P{wHy}

General Information
Symbol P{wHy} FlyBase ID FBtp0016141
Feature type transgenic_transposon
Size 15.588 Expression data
Associated insertions 825 available
Molecular map
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Description
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FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Description & Uses
Species synthetic construct
Location-dependent
role
carries hobo element
deletion generation component
Description
CV term
Qualifiers & info
Reference
Uses
CV term
Qualifiers & info
Reference
genomic insertion screen
mutagenesis
Cloning Sites
Location
Restriction sites
Reference
hide Sequence Data
Sequence (FB) FlyBase-compiled
Associated Sequence Data
DDBJ /
EMBL /
GenBank
DNA sequence
Extent
hide Segments & Size
Total Size
15.588
Left end
Right end
Segments
Number
Orientation
Symbol
2
+
3
5
+
7
8
+
10
+
Reference (Huet et al., 2002)
hide Features
CV term
Qualifiers & info
Reference
complete
partial
rescue
selectable
marker
selectable
selectable
visible
hide Component Alleles
Allele w+mC
Reference(s) (Pirrotta, 1988, Huet et al., 2002)
Molecular data
Minigene of the white cDNA.
4.15kb SpeI fragment of the w gene that carries a deletion of a large part of the first intron and the regulatory region is reduced to 300bp preceding the transcription start site.
Construct: A 'mini-white' gene constructed by deletion of the HindIII-XbaI fragment from the long 5' intron. Carried by the Casper series of vectors.
 
Phenotypic class
Phenotype manifest in
Other information
Allele y+t7.7
Reference(s) (Basler and Struhl, 1994, Geyer and Corces, 1987, Huet et al., 2002)
Molecular data
Construct: 8kb SalI fragment carrying y+.
Contained within 7.7kb SalI-BglII fragment that includes the entire y+ gene.
Fragment containing the y gene, including 2873bp 5' and 130bp 3' flanking sequences.
5' regulatory region deletion derivative of y, 2873 nucleotides remain upstream of the transcription start site.
Phenotypic class
Phenotype manifest in
Other information
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects expression of
hide Progenitors & Descendants
progenitor(s)
descendant(s)
hide Comments
Additional information at: GDP Transposons http://flypush.imgen.bcm.tmc.edu/pscreen/transposons.html
report comment: See GenBank accession AF516513.
construct_comment: Exposure to source of H\T (hobo elementtransposase) results in efficient generation of deletions with one endpoint atsite of P{wHy} insertion.
hide Stocks Listed in FlyBase ( 159 )
Bloomington
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Other Crossreferences
Linkouts
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Reported As
Symbol Synonym
Secondary FlyBase IDs
hide References ( 9 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Huet et al., 2002, Proc. Natl. Acad. Sci. U.S.A. 99(15): 9948--9953
A deletion-generator compound element allows deletion saturation analysis for genomewide phenotypic annotation. [FBrf0151478]
Mohr and Gelbart, 2002, Genetics 162(1): 165--176
Using the P{wHy} hybrid transposable element to disrupt genes in region 54D-55B in Drosophila melanogaster. [FBrf0152030]
Review
Kornberg, 2002, Proc. Natl. Acad. Sci. U.S.A. 99(15): 9607--9608
Another arrow in the Drosophila quiver. [FBrf0151476]
Personal communication to FlyBase
Myrick et al., 2005.5.16, Deletion Generator Project genomic insertion collection.
Deletion Generator Project genomic insertion collection. [FBrf0188490]
Huet and Gelbart, 2002.11, Huet et al. deletions.
Huet et al. deletions. [FBrf0155386]
FlyBase analysis
FlyBase, 2007.6, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0199566]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]
DNA/RNA sequence record
Baugh, 2002.5.30, GenBank/EMBL/DDBJ: AF516513
A deletion-generator compound element allows deletion saturation analysis for genomewide phenotypic annotation. [FBrf0153944]