A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Recombinant construct PBac{681.P.FSVS-1}

General Information
Symbol PBac{681.P.FSVS-1} FlyBase ID FBtp0065989
Feature type transgenic_transposon
Size 12.209 Expression data
Associated insertions 160 available
Molecular map
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Description
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FB2013_03
FB2013_02
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hide Description & Uses
Species synthetic construct
Location-dependent
role
GFP gene trap
Description
CV term
Qualifiers & info
Reference
transposon
Uses
CV term
Qualifiers & info
Reference
gene trap
genomic insertion screen
protein trap
Cloning Sites
Location
Restriction sites
Reference
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Sequence (FB)
Associated Sequence Data
DDBJ /
EMBL /
GenBank
DNA sequence
Extent
 
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Total Size
Left end
Right end
Segments
Number
Orientation
Symbol
Reference
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CV term
Qualifiers & info
Reference
molecular
molecular
reporter
selectable
hide Component Alleles
Allele Avic\GFPVenus.FSVS-1.T:Zzzz\FLAG,T:Zzzz\StrepII
Reference(s) (FlyProt project., 2009.11)
Molecular data
Consists of the open reading frame of the "Venus" variant of Avic\GFP which is tagged at both the N-terminal and C-terminal end with T:Zzzz\StrepII. 3 copies of the T:Zzzz\FLAG tag are present at the N-terminal end of the open reading frame. A splice acceptor site from the Mhc gene is present at the 5' end of the open reading frame and a splice donor site from the Mhc gene is present at the 3' end of the open reading frame. Splice frame 1 variant.
Phenotypic class
Phenotype manifest in
Other information
Allele w+mC
Reference(s) (FlyProt project., 2009.11)
Molecular data
Minigene of the white cDNA.
4.15kb SpeI fragment of the w gene that carries a deletion of a large part of the first intron and the regulatory region is reduced to 300bp preceding the transcription start site.
Construct: A 'mini-white' gene constructed by deletion of the HindIII-XbaI fragment from the long 5' intron. Carried by the Casper series of vectors.
 
Phenotypic class
Phenotype manifest in
Other information
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Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects expression of
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progenitor(s)
descendant(s)
hide Comments
Hybrid piggyBac/P-element protein trapping vector containing 3xFLAG-StrepTag-Venus-StrepTag.
Splice frame = 1 (comparable to splice frame in P{PTT-GA}.)
hide Stocks Listed in FlyBase ( 0 )
hide External Crossreferences & Linkouts
Other Crossreferences
Linkouts
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
PBac{681.P.FSVS-1}
PIGP681{FSVS-1}
Secondary FlyBase IDs
hide References ( 4 )
Research paper
Hijazi et al., 2011, PLoS ONE 6(3): e17763
The ly6 protein coiled is required for septate junction and blood brain barrier organisation in Drosophila. [FBrf0213269]
Rees et al., 2011, Mol. Cell. Proteomics 10(6): M110.002386
In Vivo Analysis of Proteomes and Interactomes Using Parallel Affinity Capture (iPAC) Coupled to Mass Spectrometry. [FBrf0213845]
Personal communication to FlyBase
FlyProt project., 2011.8.8, CPTI protein trap lines available from the Kyoto Stock Center.
CPTI protein trap lines available from the Kyoto Stock Center. [FBrf0214588]
FlyProt project., 2009.11, Notes on constructs used in generating CPTI protein trap lines. (Computer file)
Notes on constructs used in generating CPTI protein trap lines. (Computer file) [FBrf0213656]