A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Recombinant construct P{ocn-lacZ.YEStes}

General Information
Symbol P{ocn-lacZ.YEStes} FlyBase ID FBtp0069465
Feature type transgenic_transposon
Size Expression data
Associated insertions 0 available
Molecular map
hide Recent Updates
Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
Update Feed
Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Description & Uses
Species synthetic construct
Location-dependent
role
Description
CV term
Qualifiers & info
Reference
transposon
Uses
CV term
Qualifiers & info
Reference
reporter construct
Cloning Sites
Location
Restriction sites
Reference
hide Sequence Data
Sequence (FB)
Associated Sequence Data
DDBJ /
EMBL /
GenBank
DNA sequence
Extent
 
hide Segments & Size
Total Size
Left end
Right end
Segments
Number
Orientation
Symbol
Reference
hide Features
CV term
Qualifiers & info
Reference
regulatory/structural
selectable
hide Component Alleles
Allele Ecol\lacZocn.YEStes
Reference(s) (Meiklejohn et al., 2011, Hense et al., 2007)
Molecular data
A 150bp ocn promoter fragment (including 80bp of 5' flanking sequence and 70bp of 5'UTR) which corresponds to -165 to -16 relative to the A in the ATG start codon is fused upstream of the Ecol\lacZ open reading frame. The ocn 3'UTR sequence (-16 to +93 relative to the T in the TGA stop codon) is present downstream of the Ecol\lacZ coding region.
Phenotypic class
Phenotype manifest in
Other information
Allele gypsy\su(Hw)BR430
Reference(s) (Hense et al., 2007)
Molecular data
Contains 12 su(Hw)-binding sites, corresponding to bp 647-1077 in the gypsy transposon.
Consists of a 430bp gypsy\su(Hw)BR, gypsy sequences 647-1077 (coordinates of FBrf0045014).
Consists of a 430bp gypsy\su(Hw)BR, including all 12 binding sites, nucleotides 647 to 1077 of FBrf0045014.
Construct: Consists of a 430bp gypsy\su(Hw)BR, including all 12 binding sites.
Phenotypic class
Phenotype manifest in
Other information
Allele y+mDint2
Reference(s) (Hense et al., 2007)
Molecular data
Construct: 5.2kb y+ gene including 2.8kb of 5' flanking sequences and 0.13kb of 3' sequences and lacks the tissue-specific bristle and tarsal claw enhancers.
5.2kb y gene fragment containing 2.8kb of 5' flanking and 0.13kb of 3' flanking DNA and lacking the intron that is the location of the tissue-specific bristle and tarsal claw enhancers.
5kb intronless SalI fragment containing the y gene.
5.2kb SalI y gene intronless fragment containing 2.9kb of 5' flanking and 0.3kb of 3' flanking DNA.
Phenotypic class
Phenotype manifest in
Other information
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects expression of
hide Progenitors & Descendants
progenitor(s)
descendant(s)
hide Comments
hide Stocks Listed in FlyBase ( 0 )
hide External Crossreferences & Linkouts
Other Crossreferences
Linkouts
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
P{ocn-lacZ.YEStes}
Py<up>+:YEStes:ocn:lacZ</up>
pPYEStes-lacZ
Secondary FlyBase IDs
hide References ( 2 )
Research paper
Meiklejohn et al., 2011, PLoS Biol. 9(8): e1001126
Sex Chromosome-Specific Regulation in the Drosophila Male Germline But Little Evidence for Chromosomal Dosage Compensation or Meiotic Inactivation. [FBrf0214756]
Hense et al., 2007, PLoS Biol. 5(10): e273
X Chromosome Inactivation during Drosophila Spermatogenesis. [FBrf0201467]