Transcript Dmel\Appl-RA

General Information
Symbol	Dmel\Appl-RA	Species	D. melanogaster
Annotation Symbol	CG7727-RA	FlyBase ID	FBtr0070109
Feature type	mRNA	Associated gene	Dmel\Appl

Evidence Rank	Strongly Supported	Length (nt)	5453
Evidence Score	15

Map ( GBrowse )
Recent Updates
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 65 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent	DPiM_GH04413 GH04413
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	18278 18839 30708 41829 55617 65090 71372 75575 78298 79424 281315 CK01.10D.D4 CK01.54C.F9 CK01.57D.D8 CK01.102D.A6 CK01.120B.C4 CK01.122D.E5 CK01.126C.F5 EC240053 EC252118 EC255908 EC256267 EC256286 EC256993 EC257239 EK044321 EK046048 EK060009 EK086435 EK091842 EK097023 EK128630 EK131263 EK207547 EK223001 EK290550 EK305906 EK306549 EP09560 EP10804 EP11523 EP11657 EP18739 EP19045 GH09154 GH17769 GH17953 GH19034 GH21712 GH24970 GH28875 HL05587 LP14796 LP19055 Nfly-115 RH09907 RH52284 RH74726 RP004092166 RP004148885 RP004490326 RP004505066 RP004551486
End(s) extend beyond the annotated transcript, internally consistent
Sequence
	GTGGACTCGCAGGATTGCAGGCAACGAGACCACTCGCAGTCGTTTGTGAG CGTTCGCAGCGCCAGCAAAGTGTTAAACGAATAGCCAACAAAGCAAATAC AATTAACCAGAACTGGAAGCACGTCAGTCCAGCCGCAGAAGCAGCTAAGT TCAGACCAAACTCGGAGATTCCCAGCCAGGAGATAGGACCAGGAGCCAAC CAGACGAGGAGCAAAGAAGCAGAAAAGAGTGCGAACAATGTGCGCCGCGC TGCGTCGTAATTTGTTGCTGAGGAGCCTCTGGGTCGTCCTGGCCATTGGC ACTGCTCAGGTTCAGGCCGCATCGCCGCGATGGGAGCCCCAGATTGCCGT TCTCTGTGAGGCCGGACAAATCTACCAGCCGCAGTATCTTTCCGAGGAGG GACGCTGGGTGACGGACCTTAGCAAGAAGACAACCGGTCCCACATGTTTG CGTGATAAAATGGATTTGCTTGATTACTGCAAGAAGGCCTATCCCAACCG AGACATAACCAACATTGTGGAGTCGTCCCACTACCAGAAGATCGGCGGCT GGTGTCGCCAGGGGGCATTGAATGCGGCTAAGTGCAAGGGATCCCACCGA TGGATCAAGCCATTCCGCTGTCTCGGACCATTCCAATCTGACGCCCTGCT AGTTCCCGAGGGCTGTCTGTTCGACCACATCCACAACGCCTCCCGATGCT GGCCATTTGTGAGGTGGAACCAAACCGGAGCAGCCGCTTGCCAGGAGCGC GGAATGCAGATGCGCAGCTTCGCCATGCTTCTGCCCTGCGGAATCTCGGT CTTCTCCGGAGTGGAGTTCGTCTGCTGTCCCAAGCACTTCAAAACCGATG AAATTCATGTAAAGAAGACCGACTTGCCGGTGATGCCGGCAGCTCAGATC AATAGCGCCAATGACGAGCTGGTGATGAATGACGAAGACGACAGCAACGA CTCGAACTACTCGAAGGATGCCAATGAAGACGATCTGGACGATGAGGATG ATTTGATGGGTGATGATGAGGAGGACGATATGGTGGCGGATGAGGCAGCT ACCGCAGGCGGAAGCCCCAACACCGGTTCCTCAGGTGACTCAAATAGCGG ATCTTTGGATGACATAAATGCGGAGTACGATAGCGGAGAGGAGGGTGACA ACTACGAGGAGGACGGTGCTGGTTCCGAAAGCGAGGCTGAGGTTGAGGCC TCCTGGGATCAGAGCGGAGGGGCGAAGGTTGTGTCCCTAAAAAGCGATTC CTCATCCCCGTCTAGCGCTCCGGTTGCTCCCGCCCCCGAGAAGGCACCTG TGAAGTCCGAATCGGTCACGAGCACTCCTCAGCTGTCTGCCTCTGCCGCT GCTTTTGTAGCTGCCAATTCTGGAAACTCGGGAACCGGAGCCGGAGCACC ACCATCCACTGCACAACCCACATCGGATCCCTACTTCACCCATTTTGATC CGCACTACGAGCACCAGAGCTACAAAGTAAGTCAGAAACGCCTTGAGGAA TCGCACCGCGAGAAGGTCACGCGCGTTATGAAGGACTGGTCCGATCTCGA GGAGAAGTACCAGGACATGCGCCTAGCGGATCCCAAGGCAGCCCAGTCAT TTAAGCAGCGGATGACGGCTCGCTTCCAGACTTCTGTTCAGGCACTCGAG GAAGAAGGCAACGCCGAGAAGCACCAGCTGGCCGCCATGCACCAGCAGCG CGTTTTGGCCCACATCAACCAGCGGAAGCGCGAGGCCATGACCTGCTACA CCCAGGCCCTGACTGAGCAGCCCCCGAATGCCCACCACGTTGAGAAGTGT CTACAGAAGCTGCTGCGCGCCCTGCACAAGGACCGGGCCCACGCCTTGGC CCACTACCGGCACCTATTGAACTCTGGAGGACCTGGTGGACTAGAAGCAG CTGCTTCGGAGCGTCCACGCACGCTGGAGCGCCTAATCGACATCGATAGA GCCGTAAACCAGTCGATGACCATGCTCAAGCGCTATCCGGAGCTCTCCGC CAAGATTGCCCAGCTGATGAATGACTACATTCTGGCACTGCGCAGCAAGG ATGACATTCCCGGCTCCTCGCTGGGAATGAGCGAGGAGGCGGAGGCCGGC ATTCTGGACAAGTACCGCGTCGAGATCGAGCGCAAGGTGGCCGAGAAAGA GCGACTACGGCTGGCGGAGAAGCAGCGCAAGGAGCAGCGTGCCGCTGAGC GGGAAAAACTGCGCGAGGAGAAGCTGCGCCTGGAGGCCAAAAAGGTGGAC GACATGCTCAAGTCACAGGTGGCCGAGCAGCAGTCCCAGCCGACCCAGTC GTCAACCCAATCGCAGGCGCAGCAGCAGCAGCAGGAAAAGAGCCTTCCCG GCAAGGAGCTGGGTCCCGACGCAGCTCTGGTCACAGCGGCCAATCCCAAC CTAGAGACCACCAAAAGCGAGAAGGATCTGTCGGACACTGAGTATGGGGA GGCAACAGTGAGCAGCACCAAGGTGCAGACCGTGCTGCCAACGGTCGACG ACGATGCCGTCCAGCGGGCAGTGGAGGACGTAGCCGCCGCCGTCGCCCAC CAGGAGGCCGAGCCGCAGGTGCAGCACTTCATGACCCACGACCTGGGCCA CCGCGAATCGAGCTTCTCGCTGCGCCGCGAGTTCGCGCAACATGCACACG CGGCCAAAGAGGGCCGCAACGTCTACTTCACGCTCTCCTTCGCCGGGATC GCCCTGATGGCGGCCGTTTTCGTTGGCGTGGCCGTGGCCAAATGGCGAAC ATCGCGCTCGCCGCACGCCCAGGGCTTCATCGAGGTCGACCAGAACGTCA CAACACACCATCCCATTGTGCGCGAGGAGAAGATCGTGCCCAACATGCAG ATCAATGGGTACGAGAATCCGACCTACAAGTATTTCGAAGTGAAAGAGTA AGCGAGATGGCAAGATGGCAGCATGGGCGCGGCTGGCAAGAGCGAGCGAG TGGCACACATCAACAACAACAGTAAACGCAACTGCAGCCACCGCGATTTC AAAATGGAAAAACTTAAGCGTATTATTAAAGCAGATGGGAAGAGAAATGA TTTTTTTTCGTGAAATGAGCGCAGTTTCAATAAGAAAGAATGAAAGGGTA GAAGAAGAAAGATAAATTCAATAAATGGTAATATATCTATATATTAAATT AAAGCAAGCAGAAAGGCAACAATATAAAGCAAGCAATTAAATTTAAGTAT TTGAATGTTTAACAAAACGCCGTAAACATCCTTTCCAGCTCTCTCTTTCT CTTCCCCTGTCTCTGTCTCTGTCCCATCACCACACACACACACATCAACA ACAATGGCACACACTCACACACACTTGCCTCTAACTTTGTGATTCTTCTT GAGCGCCAGCTACGCAAAGAGAGTAGAAGTGCTGAAGTGAAGATCATACA CGCAGCCGAACGAAGAGTGGTGGAGCGGGGGAGGAGAGGATGGAGAAGAG CGGAAGAAGAGCAAAACAAAAGATATTCCTAGTAAATAAATTGTCGACAC ACACATCACATCCACATTCAAACACCGAGTCACCCGCAGAACAGTCACAC CCACACTCACACATACAGTGTCAGGAATGCGCAAAAAAGACACAAACGCA TTCATGCCTGCTTCGTAGCATATTTTTGAGCGTTTCGTGGCATTAGAACG CTTGCAAGCCGATCGCAATTCTTACCAAAAACCTACGCCATTAATTAGAG CGGCAGCGAGAGCTAAAAGATAAGAGCAGGAGGCAGAAACACCAACACAC AGACACGGAATCTCGCACACTGAGACACTTGTGAACCTAAGAGCTACCTA CGCGTACTAATCCCTATACGATCGTGCATATGCGCTTGTGTATATGTCGA ACTTTCTCTCTCTGTAAGCCACACACACTCACCAGAGAAGGGAATAGAAC ACACAAACCATACACAAACCACACACGCATACACGCAAAATATATACAAA ATATTTACAGCAAAGCCAGAAGAAATGTCCATAAATGTATTTATGTATCT ATACACGAGCCACACAAAGCAAAGGTCGAAGGTCAGCCAGCTAGGGAAGA ATGACGACGCTTGGCGGGCTTTGAATATAATATACGAATCAGCTATGTAA CAGAAACAATGCAAAACGCTAAGCTAATTGCAGACAGAAACAAAAGAAGG AAAACCAAATATTAAAATGAAAGCGAACAAATTTTAGAACTTTTTCTGCA TATTTTGTGTGTAAGTCGATGGTCGAACAAAAACAACAAGAACAAAAAGA ATTTCTCTCTTTTTTACGTACATTTTCACCGAAAAGACAGCACAAAACAA GACAGCAGTTACAACTCACAACTCACAGCTCACACCCACACAGCACACAC ACACACACACACACGCTGCACACACACACACACACACACACTGAACGGAG CCCTTGAGCCAAGTAGAGTTGAGTTGTTGCATTTCATATCGAAGGCTTCG CAAGTGTTGCATAATTGCCTTAGAGCCAACTGCGGCAGAAATCAGATAAG CGGGCTCGGCGAATCGCAAAATCCAGAGAGCTCGCAGCTCGGAGACGGCA CCACCTGGAGTGGACGCTTCGAAGAACCCGAGGCCCAGAGATAAACCAAT TTGAAACGGCTAGTTCATTTCACGGCTCGATTGCTTGGCAAATATTTGGC CTGTTTTGTTCGAGCATCGAGATACTGTTACTCAATCAAGCCCAATAATC GAAATGCTTTCCCCGCTGAAAGCCGACAAGTGGCTGCCCTTCTCAGTTCG TTTTCCATTTACGATTTACGTTTAATTTCCATTGCCAAATTGGCCATTTT CTTGGTGTGACTCACTTCGGCTGAGATTAAGTGAAAGCACACACTAACAC ATCACAGCTGAAATTCATGTTCAGATCAAAGCTAAATCAAAAGTGCAGCG AAAGTCGATATTTTTCAAATGTACAAAAACAAAACTGGAAACTGAGAAAA CAACACCTAAATTCAAACCAAAATATTTGCTGTACCTCAAAATATATATA TTCTGTTTCATACATTAATTTGTGACTAGCCAGCTTTCGATCGGTTTAAG CTTAGGCATTATTCGTGGCCCCATTTTCAGCATAAGTTCTCATTCGAATT AAACTAAATTGTATTGGCAATTGGCAATTGGCAATTTGAACGGCATGAAT CTTGGGATTGTTTAGATCACTTGGCTCTATTGAAAAGATCCGGGCTAAGA TTGTTACCACGTTTTAAAAGCATGGCAATCAAGGCAAATCAACGGCGCTC CGCGACACACACATAAACAGACGCGTTATATAATGTATTACAAACATATA TATATTTCAAGAGGAAAACCCAAATGGCAAATCAACTACACAAAAAGCAA ATAAGAAGAAATCTTACTAGTCAAAGCTTGAATATTTTTTATTTTATTCA TTAATGCAACAAGAACAACAACAAAAATGAAAAAAGTATACATATATATA AAT
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) Appl-RB FBtr0307291 6331 Appl-RC FBtr0307292 5282 Appl-RD FBtr0307293 5456 Appl-RE FBtr0307294 6355 Appl-RF FBtr0307295 5456
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) Appl-PA FBpp0070104 887
Derived from OTHER transcripts	Name FlyBase ID Length (aa) Appl-PB FBpp0298292 890 Appl-PC FBpp0298293 830 Appl-PD FBpp0298294 888 Appl-PE FBpp0298295 883 Appl-PF FBpp0298296 888
Comments
	Transcript terminates at site supported by polyadenylated cDNA.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_057278
Synonyms
	Appl-RA CG7727-RA
References ( 2 )
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]