Transcript Dmel\sdk-RB

General Information
Symbol	Dmel\sdk-RB	Species	D. melanogaster
Annotation Symbol	CG5227-RB	FlyBase ID	FBtr0070132
Feature type	mRNA	Associated gene	Dmel\sdk

Evidence Rank	Strongly Supported	Length (nt)	8908
Evidence Score	15

Map ( GBrowse )
Recent Updates
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 81 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent	IP16011 LD22322 RT02073
End(s) extend beyond the annotated transcript, internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	15015 31183 31222 33121 33831 35774 36456 50524 73425 78499 161859 176264 181567 214571.6 273923 CK01.17C.C7 CK01.24D.E4 CK01.59D.H12 CK01.87A.H7 DMG4-chrX.2.003.pred.a DMG7-chrX.2.003.pred.a EK022138 EK048462 EK068632 EK104962 EK136005 EK140415 EK142851 EK145915 EK147233 EK148562 EK176337 EK193901 EK194559 EK202957 EK207948 EK266096 EK276850 EK280755 EK286529 EK286905 EK288304 EK295308 EK298625 EK301034 EP11413 FGM235A11 GM02010 IP16111 LD04144 LD07652 LD21779 LD22445 LD26517 LD38885 LD42472 RP004023067 RP004029188 RP004090178 RP004113208 RP004158213 RP004176498 RP004201728 RP004201755 RP004222421 RP004239910 RP004248070 RP004250141 RP004305641 RP004316895 RP004403115 RP004404792 RP004417558 RP004516748 RP004541988 RP004558989
End(s) extend beyond the annotated transcript, internally consistent	214577.5 ESG014a.E21_G05
Sequence
	CAGCGCAGTTCGTTTTGTGCGCGCGTAGTGAACGGTTGTCTTTCGGTTGC TCGTCGGGGAGTTGCAAATTCAGCGACAGCAGCAACTACAAATGGCGACT TGTGCCTGTCGGACCCTCGAGTTCATTGTTAATTGTTAATCGTTGTGGTG CTAAGCGTTGGCCGAACGGTTTATGGGTATATGGTAACCCTGGTGGCAGA AAGAAGAACATACTTGTGTCCAGAAGGAAGGAGGAAAAGCACCAAAAAAG ATGTGAGCGATGTGTAATTAAAACTAGACTTTTCACTAAAAACTAGAAGA GCGAAGGAAGGCCGCTAAGAAAACAAAGCGAAATCCCAGAAATACGAATA CCGAAAGGCAACAACAAATGCTCAAATCTGCGGCGTCGTCGCTGCGTCGA CGTCGTCCAAAAACAACAATAACAGCAACATTAGCCATCGAGATGCCGTC GCAGCCGAAGTTGGCGTCTCTGCTTGCAGTGCTGGTTTTGCTCTGCTACT GCGACAGCTGCTTTTTTTGTTACGCGGATGCCAATCTACAGCAGCAGAAT TCAATCGTTCAACAGCAGCAACTTCAGGCTCCTCGGTTTACCACACATCC ATCGTCATCGGGATCGATTGTCAGCGAGGGCAGCACCAAGATACTTCAGT GTCATGCGCTGGGATACCCGCAACCCACATATCGATGGCTAAAGGACGGC GTCCCCGTGGGCGACTTCTCATCCAGCCAGTTCTACCGATTCCACAGCAC CCGGCGCGAGGATGCGGGCAGCTATCAGTGCATCGCCAGAAATGATGCCG GATCCATATTCAGCGAAAAGAGCGACGTCGTCGTGGCCTACATGGGCATC TTTGAGAACACCACAGAGGGTCGTCTGACGGTGATCAGTGGTCACCCTGC GATATTCGATATGCCCCCCATTTGAATCCATACCCGTGCCGTCGGTTATG TGGCAATCGGAGGATGGACCTCTGAATTACGACATCAAGTACGCCTTCAC CCACGCCAACCAGTTAATTATTTTAAGTGCTGACGAAAACGATCGCAAGG GATACCGGGCTAAGGCCATTAACACGCAGTTGGGCAAAGAGGAGAGCAGC GCCTTTGTGCACCTGAACGTCAGTGGAGATCCGTACATCGAGGTGGCGCC CGAAATCATAGTGCGCCCGCAGGACGTTAAGGTCAAAGTTGGTACCGGAG TGGTTGAGCTGCAGTGCATTGCGAATGCCAGGCCCTTGCACGAACTGGAG ACGCTTTGGCTGAAAGACGGTCTCGCCGTAGAAACTGCCGGAGTGAGGCA CACTCTCAACGATCCATGGAATCGAACGTTGGCCCTGCTGCAGGCGAACA GCTCACATTCCGGGGAATACACCTGCCAGGTGCGATTGCGCAGTGGTGGC TACCCAGCCGTCAGTGCTTCGGCTCGCCTCCAAATCCTCGAGCCGCCGCT CTTTTTTACACCCATGCGGGCGGAAACCTTTGGCGAATTCGGAGGACAGG TGCAGCTAACCTGCGATGTGGTCGGCGAACCCACGCCCCAGGTCAAGTGG TTCAGGAACGCAGAATCGGTGGATGCACACATTGAGAGTGGAAGATACAC GTTGAACACGGATAATACGCTGGTAATTAAGAAACTAATCCTGGATGATG CTGCCATGTTTCAGTGTTTGGCCATCAACGAAGCGGGGGAGAATTCGGCG AGCACCTGGCTGCGCGTAAAAACATCGGCTCCAATTATGGAGCTGCCGCC CCAAAATGTGACCGCCTTGGATGGCAAGGACGCAACTATTTCCTGCCGGG CAGTTGGATCGCCCAATCCCAACATAACCTGGATATACAATGAGACACAA CTGGTAGATATATCCAGCCGGGTGCAGATACTTGAGTCGGGTGACCTGCT CATCTCGAACATCCGATCTGTGGACGCCGGCCTGTATATCTGCGTACGAG CCAACGAGGCGGGCAGCGTCAAGGGCGAGGCCTATTTGAGTGTTTTGGTG CGGACGCAAATCATCCAACCGCCTGTGGACACAACGGTGCTACTTGGCTT AACGGCCACCCTGCAGTGCAAGGTGTCCAGTGATCCCAGTGTCCCGTACA ACATCGACTGGTATCGCGAGGGTCAGTCGTCGACGCCCATCAGTAATTCG CAGCGCATTGGTGTCCAGGCGGACGGTCAGCTAGAGATCCAAGCGGTGCG GGCGAGCGACGTCGGGAGTTATGCCTGTGTGGTCACTTCTCCCGGGGGAA ATGAGACGCGAGCCGCCCGCCTCAGTGTCATCGAACTCCCGTTCCCACCC AGCAATGTGAAGGTGGAACGACTGCCGGAACCGCAACAGCGCAGCATCAA CGTGTCCTGGACTCCGGGATTCGATGGCAACAGTCCAATATCCAAATTTA TTATCCAGCGACGTGAGGTCTCAGAATTGGAAAAATTCGTAGGTCCAGTT CCAGACCCTCTGCTCAACTGGATTACCGAGCTGAGCAATGTCTCGGCGGA CCAACGTTGGATCCTGCTCGAAAATCTCAAGGCGGCCACCGTTTATCAGT TTAGGGTTAGTGCTGTCAATCGGGTGGGCGAGGGTTCGCCATCGGAACCC AGTAACGTCGTCGAGCTGCCCCAGGAAGCTCCTTCGGGTCCACCGGTGGG ATTTGTTGGATCCGCCCGCTCGATGTCAGAGATCATCACGCAATGGCAGC CACCGTTGGAGGAGCATCGCAATGGCCAGATCCTGGGATACATTCTGCGG TACCGCCTATTCGGTTACAACAATGTGCCTTGGTCCTACCAGAATATTAC AAACGAAGCGCAGCGCAACTTCCTGATTCAAGAACTGATCACCTGGAAGG ATTACATCGTGCAGATCGCAGCATACAACAACATGGGCGTGGGTGTCTAC ACCGAGGGCTCCAAAATTAAAACCAAGGAAGGAGTTCCAGAAGCACCCCC CACAAATGTAAAAGTAGAAGCTATAAACTCGACGGCAGCCAGGTGCCGGT GGACTCCACCCAATCCGCAGCAGATTAACGGCATCAACCAGGGCTATAAG ATCCAGGCATGGCAACGTCGGTTGATAGATGGCGAGTGGAGGGACATTGA GCGACGAATGAAGACAGTGCCACCTAGTCTGATTGATCCACTGGCGGAAC AGACAGCTATCCTCGGAGGACTTGAAAAATTTACCGAGTACAATATTAGT GTGCTCTGCTTCACGGACCCTGGCGATGGTGTGGCCAGTAGTCAAGTGGC AGTTATGACCATGGATGACGTACCCGACGAGGTGACTGGATTGCATTTCG ATGACGTCTCCGATAGATCCGTAAAAGTTCTATGGGCGCCACCGCGCGCT TCGAACGGTATCCTAACGGGCTATACGGTTCGCTACCAAGTCAAGGATCG TCCAGATACCCTGAAATCCTTTAATCTGACAGCGGATGATACAGAGTTGA CAGTGAACCAATTGCAGGCTACCACGCACTATTGGTTTGAGATCGTCGCG TGGACGCGTGTGGGCAGTGGAATTCCGAAAACAGCCACCATTCAGTCTGG CGTAGAGCCAGTTCTGCCGCACGCACCCACTGCTCTGGCATTATCCAATA TCGAAGCCTTCTCTGTTGTTCTGCAGTTCACTCCGGGCTTTGATGGCAAC TCCAGCATTACCAAATGGAAAGTGGAGGGACAAACGGCCAGAAATATGAC ATGGTTTACCATTTGCGAGATTAATGATCCCGATGCAGAGACCTTGACCG TCACTGGCTTGGTGCCGTTTACCCAGTACAGACTGAGATTGAGTGCTAGT AATGTGGTTGGTAGCTCGAAGCCCTCGGAGGCAACCAAGGATTTCCAGAC GATCCAAGCCAGGCCCAAACATCCACCGTTTAACGTAACCGTGCGGGCAA TGAGTGCTCAACAACTGCGTGTTCGCTGGATTCCACTGCAACAAACTGAA TGGTATGGAAATCCCAGGGGCTATAATATATCCTACAAGCAGCTGGTCAA AACTCCCGGGACCATTAAATACGTACCCCGGTCGGTGGTAATCGAAGATC ACACCGCCAACTCCCACGTGTTAGATAGCCTGGAGGAGTGGACACTGTAT GAGGTGAAAATGAATGCCTGCAACGATGTGGGATGTTCTAAAGAGAGTGA CACTGCCGTGGAGAGAACTCGCGAAGCTGTTCCTAGCTATGGACCCCTGG ATGTCCAGGCTAATGCCACATCATCCACCACAGTGGTTGTGCAATGGGGT GAGGTGCCCCGACAACACAGAAATGGTCAGATAGATGGCTACAAGGTGTT CTATGCCGCTGCAGATCGGGGACAACAGGTGCTGCACAAGACGATACCCA ATAACGCCACATTTACCACAACCTTGACGGAACTGAAAAAATATGTGGTT TACCATGTTCAGGTTCTGGCCTACACCAGATTGGGTAATGGTGCTCTAAG CACCCCACCCATTCGAGTTCAGACCTTTGAGGATACCCCTGGAGTGCCAT CGAACGTTAGTTTTCCGGATGTCTCCTTGACCATGGCTCGCATAATTTGG GATGTGCCTGTGGATCCTAATGGCAAGATCTTGGCTTATCAGGTCACGTA CACATTAAATGGTAGTGCCATGCTGAACTACAGCCGAGAGTTTCCGCCTT CCGATCGCACATTCCGGGCGACGGAATTACTTCCCGGAAAGTATTACAGC TTTAGTTGTACGGCTCAAACGCGACTGGGATGGGGAAAAATAGCTACTGC TCTCGTGTACACTACAAACAACAGGGAGAGACCTCAGGCACCTTCGGTTC CGCAAATATCACGCAGTCAGATTCAGGCCCATCAAATCACCTTCAGTTGG ACACCAGGAAGAGATGGCTTTGCGCCACTTCGCTACTACACAGTGGAAAT GCGTGAAAACGAGGGCAGGTGGCAACCACTTCCAGAGAGGGTGGATCCAT CTCTTAGTTCCTTTACAGCAGTTGGTCTGAGACCCTATATGACATATCAA TTCCGCATACAGGCCACCAATGACTTGGGACCATCCGCCTTTAGTCGGGA AAGTGTGATCGTGAGAACTTTACCCGCTGCTCCGGCAGTGGGAGTTGGAG GTCTCAAGGTAGTTCCCATAACCACAACTTCGGTGAGGGTGCAATGGAGT GCTCTGGAGACTGCATTGTGGAATGGTGATGCCTCAACTGGTGGCTACAG GATTTTATATCAACAACTTTCCGATTTCCCCACCGCCCTGCAGTCTACAC CCAAAACGGATGTGCACGGCATCAATGAGAACAGTGTGGTTCTGTCGGAT CTTCAACAGGATCGCAACTATGAAATTGTGGTGCTACCATTTAATTCCCA GGGCCCTGGGCCAGCCACACCCCCAGCAGCGGTCTATGTGGGCGAAGCGG TGCCGACTGGGGAACCGAGAGCCGTAGATGCAGCACCCATTTCCAGCACA GAAGTGCGATTACTGTGGAAGCCACCAAAGCAGAGCATGCAGAATGGAGA TATTTTAGGATATAAGATCTACTACCTGGTTACTTATTCACCGCAAGCGT TGGAACCAGGTCGCAAATGGGAGGAGGAAATCGAGGTTGTTTCGGCCACG GCAACTTCGCACAGTCTCGTGTTCCTTGATAAGTTCACCGAGTATCGCAT CCAACTGCTGGCCTTCAATCCGGCGGGAGATGGACCACGATCCGCCCCAA TTACCGTGAAAACACTGCCAGGAGTACCAAGTGCTCCACTTCACCTTAGA TTTTCAGATATCACTATGCAGAGTTTGGAGGTTACCTGGGATCCACCAAA GTTCCTCAACGGTGAAATCTTGGGGTACTTAGTCACGTACGAAACCACCG AGGAGAATGAAAAGTTCAGCAAGCAAGTGAAACAAAAGGTATCTAATACA ACACTGCGTGTTCAAAATCTCGAGGAAGAGGTCACCTACACATTCACTGT CCGTGCTCAAACGTCCGTCGATTACGGCCCGGGTATAAGTGAGAATGTGA CGACAGGACCCCAAGATGGATCCCCAGTTGCGCCGCGTGATCTCATCCTG ACCAAGACGCTATCCAGCGTGGAAATGCATTGGATAAATGGTCCTTCTGG GCGGGGACCCATTTTGGGCTATCTTATCGAGGCAAAGAAGCGAGACGACT CACGCTGGACAAAAATCGAGCAGACCAGAAAGGGCATGATGCAGGATTTT ACGGTCAGCTATCACATACTGATGCCCTCCACTGCGTACACTTTTCGTGT GATTGCCTATAACCGTTACGGCATTTCGTTTCCCGTGTACTCCAAGGACT CGATCCTGACACCCTCCAAACTCCATCTGGAATATGGTTACCTGCAGCAC AAGCCCTTTTATCGGCAAACCTGGTTTATGGTTTCGCTGGCGGCGACTTC GATTGTGATCATCGTGATGGTTATTGCTGTGTTGTGTGTCAAGAGCAAGA GCTATAAATATAAACAAGAGGCACAAAAGACTCTAGAGGAATCTATGGCC ATGTCAATTGACGAGCGACAAGAGTTGGCTCTGGAGTTGTATCGCTCTCG TCACGGAGTTGGAACTGGTACCTTGAACAGTGTAGGCACTCTGCGAAGCG GTACCTTGGGGACTCTGGGCAGAAAGTCTACCAGTCGACCGCCGCCGGGT GTCCATCTCGGCAAGAGTCCGCCACGCCCATCGCCCGCTTCGGTGGCGTA TCACAGCGACGAGGAGAGCTTGAAGTGCTACGACGAAAATCCAGACGACA GCAGCGTGACCGAGAAGCCCTCGGAGGTCAGCAGCTCGGAGGCATCGCAG CATTCGGAGAGCGAAAACGAGAGCGTGCGCAGCGACCCCCACTCCTTTGT GAATCACTATGCCAACGTGAATGACTCACTGCGACAGTCGTGGAAGAAGA CCAAGCCGGTGCGAAACTACTCCAGCTACACCGATTCGGAGCCGGAGGGC AGTGCAGTGATGAGCCTCAATGGTGGCCAGATTATCGTCAATAATATGGC CAGGTCGAGGGCACCACTGCCCGGCTTCTCGTCATTCGTCTGACAATCAA CTGAGTTCTAAGATCTAAGCACCAGTAGCAACGGCACCGTCATCCGCGAG ACCTTCGTCTAGGCTGAGAACGAGGAGGGTCCGAAGAAGGAACCCGGAGC TGGGGGGTTGGCTGGGGCCACTCGAACCCGTTGGAGGACGACACACACAC CCACATATCAGACAGGCCCTCCTGCCCTCAGCCCCTCCACCTTCACGACG ATACGCTGCTACAGGGATATACATATTACTTAATACCAGACATTCAGTAA GATTATCTTGTATGCATTTAGTTTGAGTTCTTAATTATGTGCTTTTTACG TTGGGTTGTGCACTTCCGCGTCTTAACGTTATCCTTTTAACTAAAAATGT TTGTATGCCCAGTACTTCCCATACTCGTAAAACGTATAAATTTGACCAAC AGGCATTAATTGAAGTAATATTTTTAAATATGCATAACCTAGTGTAAGGA GCACATTATTTTCAGCGTCAGTTTCCCAGCATGACTCTGCTCCTATTTTA TAGTATTTATTTTTGGATGTACAGTGTGAGTGCGATGCTGCCTGCCACGC CTCCAGATGTGGCATTTATGGAATAGGGCGCGACAAATCGAATCCGAATC CTGTGATAAAACGATTTCCTTGTGCCCTAATAAGTTTTTCCAATGATTTC CAAGTGTGTTCAGCGCGTGGCAGGTAGTCTGGTCTTTTAAGTGACTGTGA GTGTGAGTGACGTACGCGCTTCGTCTGCGCAATCTCATTATATATAAAAT GACAAAAGGTTATGTTTTATGTTTAGTTTTTTGTGCGAGTAAATCTAGAA AATCTACAAGTACGAAGACAAGGACAAAACACCGATGCAATCGGTGGCCT AATAAGAAATGAAGAAAACGAGTTCATGAAACACGCGAAAGAAATCATAC GCAGTAAACGAAAGTCTTTCTCTTATAAGAAAGGATAAGTGTATTTTTTT GGAAAGGCATCGAAGAAAGGCTATAGCCATGAGCATGAGAAGAATATCTA AGAAAGATGGCTTAGGTAATATTGATAGGCCATATTATTGCAATTTCCCT ACCACATAAGTTCACAAACGCAAGCAAAAGTAACACAAAGCAAACAAACA AACAAACGAGCAAACATGCAAGCATTCAAAAGCTGCATAGCACACAAACA ATCGAAGAATCGATTCGTTCAGAGCGCATGCGTAGCAGATTTAGCATTAA GTACGATCTTCTAGAGGTAAGATGCATTTTTTTTTTGTTAGTTGGGGGCC AGTCTCTACGGGGAGACTTTGCCCTGATACTCTAGATCGTAATTTTCGAT TGTTTAATCCCCGAAGCTTAGAGATAATTGTACTCGTGTTTGTATTTGAA TGCGGTTTATATTTATGACTATATTTATATATCGATGTATACATGTATAT CTAAAAACTTAAACGACTGATTATATATTTTCCCCTGATTAGTTGTATAC TTAACTCCTTTTTTGTAATACCTATGCATTAACTATGCTAAGACCACTTT GGCACTTTGGCGACCGTTGAAATGAAAACGGAGTGGATAACTTTCTGCGT TTTCCCCAAATCGCAAGCTAATTTCAACTTCAAAGACTCAAAGCACAAGT TCATCTAGTTAAGTAAATGTATTTGTAATTGTTGAATTGATGATTAAAGG ATAGTTCTCCACTAATTGAGGAGGCACGTTTGATGTGGAGGAACTATGGA GATGAAAAAGGTGGAGCTTAGGGATCTTCGCTCGTTGCTAGTTGAAATTC GTGCAACAAGCGCAAAGTATTAAAATATTGATAAATACAATTTAAATGTG TAAATGTAATTGATCGAGCATCCGAATATGAATCAATAAAAGAACATGAA ATCAATGG
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) sdk-RA FBtr0070133 8843 sdk-RC FBtr0070131 8984 sdk-RD FBtr0070130 8960 sdk-RE FBtr0302259 9406 sdk-RF FBtr0302260 8774 sdk-RG FBtr0340195 9031 sdk-RH FBtr0340196 8896 sdk-RI FBtr0340197 8740
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) sdk-PB FBpp0070127 2224
Derived from OTHER transcripts	Name FlyBase ID Length (aa) sdk-PA FBpp0070128 2224 sdk-PC FBpp0070126 2232 sdk-PD FBpp0070125 2224 sdk-PE FBpp0291468 2224 sdk-PF FBpp0291469 2224 sdk-PG FBpp0309170 2265 sdk-PH FBpp0309171 2220 sdk-PI FBpp0309172 2168
Comments
	CDS edit: sequencing error Transcript terminates at site supported by polyadenylated cDNA.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_134314
Synonyms
	CG5227-RB CG5227-RD sdk-RB sdk-RD
References ( 3 )
Research paper	Nguyen et al., 1997, Development 124(17): 3303--3312 The sidekick gene, a member of the immunoglobulin superfamily, is required for pattern formation in the Drosophila eye. [FBrf0098319]
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]