FB2025_02 , released April 17, 2025
Transcript: Dmel\ovo-RA
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General Information
Symbol
Dmel\ovo-RA
Species
D. melanogaster
Annotation Symbol
CG6824-RA
FlyBase ID
FBtr0070740
Feature type
mRNA
Associated gene
Dmel\ovo
Evidence Rank
Length (nt)
4701
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 51 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      Sequence
      Sequence Downloader
      ACAGTTACATAGCAATCGTCCGAGCGAACGGACAGACAAATTTCTGAGAATCGCACTTCTTTGCTTCTCTCATTTTCGAA
AACTTTGCCGCCGAGTTGCTGCAGCGTTTGACACCAAACACTGCCACCACTGCACAAAATAATATTGTTAACAATTTGGT
TAATAATAGCAGAGCCGCCACCTCCGTTTTAGCCACTAAAGACTGTACAATTGAAAATTCCCCAATTAGCATACCAAAAA
ATCAGCGAGCAGAGGACGAGGAGGAGCAAGAAGACCAGGAAAAAGAGAAGCCCGCAGAGCGGGAGAGAGAGAAGTCCGAT
GAGAGGACAGAACAGGTAGAAAAGGAGGAGCGGGTGGAGCGCGAAGAGGAGGAGGACGACGAGGTGGATGTCGGCGTAGA
GGCGCCACGCCCACGATTCTATAATACCGGCGTGGTCTTAACCCAGGCCCAACGCAAGGAGTATCCCCAAGAGCCCAAGG
ACTTATCCCTAACCATCGCCAAATCCTCGCCAGCTTCACCGCATATCCACAGTGACTCCGAATCCGATTCGGACTCTGAT
GGGGGCTGCAAGCTAATTGTGGACGAGAAGCCACCATTGCCGGTGATCAAACCATTGTCCCTGCGCTTGCGCAGCACACC
GCCACCGGCGGATCAACGACCAAGTCCGCCGCCTCCGCGAGATCCCGCGCCCGCTGTCCGCTGCTCGGTGATCCAACGGG
CGCCGCAATCCCAATTGCCCACCAGCCGGGCTGGCTTCCTATTGCCCCCCTTGGATCAGCTAGGACCCGAGCAGCAGGAG
CCCATCGATTATCACGTGCCGAAGCGAAGGAGCCCCTCTTATGACTCCGATGAGGAGCTGAACGCCAGGCGCCTGGAACG
AGCGCGGCAGGTGCGCGAGGCAAGACGACGCAGCACCATTTTGGCCGCACGAGTTCTGCTCGCCCAGTCCCAAAGGCTTA
ATCCGCGCTTGGTGCGATCCTTGCCCGGTATTTTGGCTGCGGCAGCCGGACACGGACGGAATAGCAGCAGTTCCAGCGGT
GCCGCCGGGCAGGGCTTTCAATCGTCCGGTTTTGGCAGCCAAAACAGCGGCAGCGGCTCGTCCAGTGGCAATCAGAACGC
CGGCAGCGGCGCTGGTTCACCTGGATCTGGTGCCGGTGGCGGTGGTGGTATGGGCGGTGGTCGCGACGGCCGAGGGAACT
ACGGACCCAATTCACCGCCAACGGGAGCATTGCCTCCGTTTTATGAGAGCCTCAAGAGCGGCCAACAGAGCACGGCCAGC
AACAATACGGGCCAAAGTCCCGGCGCTAATCATTCGCATTTCAACGCAAATCCAGCGAATTTTCTGCAAAACGCAGCAGC
GGCTGCGTACATCATGTCGGCAGGTTCCGGTGGAGGAGGCTGCACCGGAAACGGAGGTGGTGGAGCATCGGGGCCAGGAG
GTGGCCCATCGGCAAATAGTGGTGGTGGTGGTGGTGGTGGCGGCGGCAATGGGTACATCAACTGTGGTGGTGTTGGTGGT
CCAAACAATAGTCTCGACGCCTACGGCATAATACTCAAGGATGAACCGGACATTGAGTACGACGAGGCCAAGATCGATAT
TGGCACCTTTGCGCAGAACATTATCCAGGCAACGATGGGCAGCTCCGGTCAGTTCAATGCCAGCGCCTATGAGGATGCTA
TAATGTCGGACCTGGCCAGTTCGGGTCAGTGTCCCAATGGAGCCGTCGATCCGCTTCAGTTCACAGCCACTCTGATGCTG
AGTTCGCAGACCGATCATTTACTGGAGCAGCTGTCCGATGCCGTGGACTTGAGTTCATTCCTGCAAAGGAGCTGCGTGGA
CGACGAGGAGTCCACCAGTCCGCGGCAGGATTTCGAGCTGGTGTCCACGCCCTCGCTAACGCCGGATTCAGTGACGCCGG
TGGAGCAGCACAATACCAATACAACCCAGCTGGATGTCCTGCACGAGAATCTGTTGACGCAGCTGACCCACAATATAGTC
CGGGGCGGCAGCAATCAGCAGCAGCAGCACCATCAACAGCATGGTGTGCAGCAGCAACAGCAGCAGCAGCATAGTGTGCA
GCAGCAACAGCAGCACAATGTGCAACAGCAGCATGGCGTGCAGCAGCAACATGTCCAGCAGCAACCACCGCCCTCGTATC
AGCATGCCACGCGTGGCCTGATGATGCAACAGCAGCCGCAGCACGGCGGCTATCAGCAGCAAGCTGCCATCATGTCGCAA
CAGCAGCAGCAATTGCTCAGCCAGCAGCAGCAGCAGTCGCACCACCAGCAGCAGCAGCAGCAGCAACATGCCGCTGCCTA
CCAGCAGCACAACATCTATGCACAGCAGCAACAGCAGCAGCAGCAGCAGCATCATCAACAGCAGCAACAGCAGCAACATC
ATCACTTCCACCACCAGCAACAACAGCAGCCACAGCCACAGTCGCATCATTCGCACCATCATGGCCATGGTCATGACAAC
AGCAACATGTCGCTTCCCTCGCCAACTGCGGCTGCAGCGGCGGCGGCCGCTGCTGCTGCTGCTGCGGCAGCCGCAGCCGC
TCATCTGCAGCGTCCGATGAGCAGCAGCAGCAGCTCCGGCGGCACCAATAGCAGCAACAGTAGCGGTGGCAGCAGCAACA
GTCCGCTCCTAGATGCAAACGCTGCTGCGGCAGCTGCAGCTGCTTTGTTGGACACAAAGCCACTCATCCAAAGCGTAAGT
AATCCAATTGGTCAGCCACTAAATACGCAATCACAGCAGCAAAAGCAGGGACAACAAATCACATTGATGAAGACCACTAG
GTACACGGAATTCGTCGAGATGGTGTCCATGGACGTGACGGTCAAGCCAGAGCTCTTTAGCGAGCTCAAGCCAGAAATGA
CCGAGATCACCGCCGAGGAGTTGACTTTGGAAGCAGAGACAACAGCAGCAGCGGCGGCAGCAGCAGCAGCAGCAGCAGCT
GCAACAACAACATCAGCAACAGAGGGAACTCAGGTTCTGGCAGCAGCGCCGGCACCATTGTCATCCGGCAGAAAGCTGCG
TGGACGCGCCAAGGCTGTAGCCTATGGCTCCACAATGATTACGCTGATATCCACGCTGAAATCGTCGCCAGAAGTGCCGG
CCACCAAGACGGTGCACCGCACCACTTTGCGATCTTTGGCTACGGCGGCAGCGGCCACTGCAGCCGGTTTGCTGGCGCCA
TCGCCCACCGTTTCCGTTTTGAATGAGAGCAAAGTCTTGCAGCGGCGCTTGGGCTTGCCGCCGGATCTGCAGCTTGAGTT
TGTGAACGGCGGCCATGGCATTAAGAACCCGCTGGCCGTGGAGAATGCCCACGGTGGCCATCACCGAATTCGCAACATCG
ATTGCATTGATGATCTCAGCAAGCATGGCCACCACTCGCAGCACCAACAGCAGCAGGGCTCGCCGCAGCAGCAAAATATG
CAACAATCGGTGCAACAGCAGTCGGTGCAACAGCAGCAATCCCTGCAGCAGCAACAGCAGCAGCAGCACCATCAGCACCA
CAGTAACAGCAGTGCAAGCAGCAATGCCAGCAGTCATGGATCCGCCGAAGCCCTTTGCATGGGCTCATCCGGCGGAGCCA
ATGAGGATTCGTCGTCGGGCAACAATAAGTTCGTCTGCCGCGTCTGCATGAAGACATTCTCGCTGCAGCGCCTGCTCAAT
CGGCACATGAAGTGTCACTCGGACATCAAGCGGTATCTGTGCACGTTCTGCGGCAAGGGATTCAACGACACCTTCGACCT
CAAGCGCCACACGCGCACCCACACGGGCGTCCGGCCGTACAAGTGCAATCTCTGCGAGAAGAGCTTCACGCAGCGCTGTT
CCCTCGAGTCGCACTGCCAGAAGGTGCATAGCGTTCAGCACCAGTATGCCTACAAGGAGCGCAGAGCCAAGATGTACGTG
TGCGAGGAGTGCGGACACACCACCTGCGAGCCGGAGGTCCACTATCTGCACCTGAAGAACAACCATCCGTTCTCGCCGGC
GCTGCTTAAGTTCTACGACAAGCGGCACTTTAAGTTCACCAACTCGCAGTTCGCCAACAATCTGCTCGGCCAGCTGCCCA
TGCCAGTCCACAATTAGTTGATGGATTTTAGTTATATAGAATAGGAACCATTCGATCGATTCGAATCATTCGAATAACTC
GAATCACTCGAATCACTCGAATCACTTAAGCAAACCAACATTGTGACTTTGAAGTTTTTTGAAAACTGCCCCCCCCTCCT
TTTGCGGAGGATACGGAATTATTGGAGATTATGCTTATTATGTATATTTTTGCGTAGTCCTAAGAAAATTAGTTACTAGT
TACTAGCTGAATTAGTACCCACTGTATCATGCTACCCCACTTCACTTTGCTGTGCAAATCTCTCTCACTTGAGAAAACTC
GAGTTCCCTTTTCTTTATTGTTAATCTTGAATTTTCGTTTATTTCAAGTATGGATCTTTCGAAAAAAAAAACTCGTTGTT
AGTCAAAAAGAAAGGTATCGTTAGGACGTAAGAAATGTTTGAAAATGCTTTGAGCAACACTCACACAAATTATGAATGAT
CGCGTATACATATATTAGAAGAAAATATATATTAAATATTTAGCTTTAAGATGTTAAGAGCTACCAACCGAACAAGCTGC
AAACGTTGGCATTTATTTGTCTTCAACAAAACAGAACACAAATCAAAAAACAAAAACTTCG
      Other Products of this Gene
      Other Transcripts
      Name
      FlyBase ID
      Length (nt)
      ovo-RB
      FBtr0070738
      5518
      ovo-RC
      FBtr0070739
      5715
      ovo-RD
      FBtr0100408
      5021
      ovo-RE
      FBtr0301914
      6763
      ovo-RF
      FBtr0482673
      4647
      ovo-RG
      FBtr0482674
      4167
      ovo-RH
      FBtr0482675
      4623
      Polypeptides
      Derived from THIS transcript
      Name
      FlyBase ID
      Length (aa)
      ovo-PA
      FBpp0070708
      975
      Derived from OTHER transcripts
      Name
      FlyBase ID
      Length (aa)
      ovo-PB
      FBpp0070706
      1351
      ovo-PC
      FBpp0070707
      1222
      ovo-PD
      FBpp0099822
      1028
      ovo-PE
      FBpp0291128
      1351
      ovo-PF
      FBpp0428593
      957
      ovo-PG
      FBpp0428594
      797
      ovo-PH
      FBpp0428595
      949
      Comments

      Corresponds to "OvoB" transcript from FBrf0211356. Acts as an activator.

      Transcript terminates at site supported by polyadenylated cDNA. (GB:U10671)

      Transcriptional initiation is supported by RAMPAGE TSS data (FBrf0220331).

      External Crossreferences and Linkouts ( 1 )
      Crossreferences
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      Synonyms and Secondary IDs (2)
      Reported As
      Symbol Synonym
      CG6824-RA
      (FlyBase, 1996-)
      ovo-RA
      (FlyBase, 1996-)
      Secondary FlyBase IDs
        References (2)