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General Information
Symbol
Dmel\Upf2-RA
Species
D. melanogaster
Annotation Symbol
CG2253-RA
FlyBase ID
FBtr0071117
Feature type
Associated gene
Evidence Rank
Length (nt)
5078
Evidence Score
Genomic Location
cDNA Clones Consistent with the Transcript ( 10 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        AAAACATCGCCCTCCTCAACCCCCCCGCATGTAAATCGTGGCGGAAAAACGTGGGAAAAACAAAGCAATGACAGTTATTT
        AAAGAACATAATATCAAATATATAATTCGTCCGAACAGTTCCAGCAACTGATCAACCTAAGGTGACTATTTCACATTAAA
        AACTATGCCCAATCACACTCAGCCTTAGCTCTCCAAGAACAAAATAGTTCCCGATTCGCATACCTTTGCCAGCAGGTCCA
        GTTTCAAAACATAGCCACCGCGCATCAAGTCGCGCCAACGTGAATCCGTTCACGGAACTTCCACCAACGCCATGCTAGCC
        AACGATTCTGCAACGACTGACAGCGAGGTGTCCACACCGCCGTCGTCGAGGAAAGATTTGGCAGATGGTGTTGCCGAGGG
        TGACAACGACAACGACATCGATACCGGCGACACGGACGCAAATGCGGATGAAGATGTGGATGCGGCTGCTGCCATTGCCC
        TGGAGGCCGAAGAGCGCGAGGAGCTGCAACAGTTCATAAGCGAGCTGCGCGAGAAGATCGAGAGCAAGCGACAGCTGCGC
        CTCCAAAACTCCACAATCGAGCTGCCCGGTGAGGAGTACTTCGCCAAACTGGACTCCAATCTCAAAAAGAACACGGCATT
        CGTCAAGAAACTGAAACTATTCACGGCCACACAGCTGGACGGACTATTGCGTGAGATATCTGCTCTAAACCTGAGCAAAT
        ACATCTCGGAAATATGCGCCGCGCTGGTCGAGGCCAAACTGAAAATGACTGATGTGCCGGCGGTGGTGACGCTGGCCTCT
        CGGCTGCACTGCACATATGCCGACTTCGATGTCCATTTTCTGGAGGCCTGGCAAAAGGCACTGAACATCAAGGCCACCGA
        GAAGATTGGCAATCCGAGCAAACTGCGCGTGGATCTTCGCCTGTTCGCCGAACTAGTCAGCTCTGGTGTGATCCAAATGA
        AGCCCGGATTGGCCCAACTGGGTGTTGTTCTGGTGCATTTGATTGCCCTGGACAAGGATGACCACAGCAACTTCTCGATC
        ATCCTCTCATTCTGCCGGCACTGCGGCGAGGAGTACGCCGGCCTAGTGCCGCAAAAGATGCAACAGTTGGCCACCAAATA
        CGGGGTGGAGGTGCCGAAATCCGACTTCCTGACTGCCGACAAGCAGCTCAATCTGCGCACCATGCTTAAGGGTTACTTCA
        AGGCCCTGTGCAAGCATGTCCTGGCCGAGCAGGCCGAACTGATGAACATGACCAAGAACATTCGGCGCACCATGGAGTGC
        AAGGGTGAGATATCCACGGAGAAGCGCGAGAAGTGTGAACTGATGCAGGCCGGATTCGATAAGCTGCTGGCCTCCGCTCA
        ATCGCTGTCGGAACTGCTGGGTGAACCACTGCCCGAGCTGGCCAAGGAGTCTGAGGGCTGTAATCCGGGCACAGTCATCG
        ACAACATGCTGGACAGTGCCTCCTTTGGTGTGCTGGATCCGTGGGGCGACGAGGAGACCCGAGCCTTCTACACGGATTTG
        CCCGATTTGAGACAGTTTCTGCCAAACTTTTCGGCACCCAAAGTCGATTTGGAAACGTTAGAGGAGCCCAGTGAACTAAC
        CGAAGAAGCGATCGATGCCAATCTAGATGCCGAAATGGATCTAGATGATCCACCGTCCACCACTTCGGATACGACTCCGG
        AGAATCCAATCGAAGAGCAGCCAACGACGCCAGTTGCCGCTGCGGAGGATCTCAAGCCGCAGAAGATGGGTAACGCTCTA
        ATGGAACTGGGTCGCCAGCAGCAGCAGCAAAGTCAGCTCAACCAGAATCCGATCCAGATCCAAAACCAGATGCGTCAGCA
        GTTCGATGGCTTCCTGGTCAACCTATTCAACTGTGTGAACAAGGAGCTGATCGATTCGGCGGCCATCGAGTTCCTGCTTA
        ACTTCAATACCAAGCATCAACGCAAGAAGCTGACGCGTACGATATTCTCGGTGCAGCGTACGCGTCTGGATATCCTGCCC
        TATCTCTCCCGCTTCGTGGCCATTGTGCATATGTGCAATACCGATGTGGCCACCGATTTGGCCGAACTGCTGCGCAAGGA
        GTTCAAGTGGCACATTCACAAGAAGAACCAGCTGAATATCGAGACGAAGCTTAAGATTGTGCGATTCATTGGTGAACTGG
        TTAAGTTTGGTTTGTTTAAAAAGTTCGATGCCTTAGGATGTCTGAAGATGCTGCTAAGGGACTTTCAGCATCATCAAATC
        GAGATGGCCTGTGCCTTTGTGGAAGTCACCGGCGTCTATCTGTACAATTGCCGGGATGCCCGTCTGCTGATGAATGTGTT
        CCTGGACCAGATGCTGCGCTTGAAAACAGCCACGGCAATGGACTCGCGACATGCGGCGCAGATTGAGAGCGTGTACTATT
        TGGTAAAGCCGCCGGAATCGTCCAAGCGAGAGCCCATGGTTCGGCCGGCAATGCATGAGTACATCCGTTACTTGATCTTC
        GAGGAGCTTTGCAAACAGAACGTTGATCGTTGTATCAAAATGCTGCGCCGCATCGATTGGCAGGATCCGGAGACAAATTG
        TTATGCCATTAAGTGCCTCAGCAAGGCGTATCTGCTGCGCTTCCAGCTCATCCGCTGTCTGGCCGATCTCGTATCCGGAC
        TGAGCTCCTATCAGCCACGAGCGGTTACCATCGTGATCGATAATGTGTTTGAGGATATACGCGCTGGCCTCGAGATTCAT
        TCGCCACGCATGGCACAGCGGCGCATCGCGATGGCCAAGTATCTGGGCGAGATGTACAACTACAAGCTGGTGGAGTCCAC
        GAACATTCTTAATACGCTGTACTCCATCATCTCGCTGGGCGTATCGAATGACCAAAATGTCGTCTCGCCACTGGATCCGC
        CCGATAGCCTGTTCCGACTGAAGCTTGCCTGTATGCTACTGGACACGTGTGCACCCTACTTCACCAGCCAGGCCACGCGA
        AAAAAACTGGACTACTTTCTGGTCTTCTTCCAACACTACTATTGGTTCAAGAAATCCCATCCCGTGTTCAGCAAAACGGA
        GAACACCTCCGATTTGTTCCCCATCCTAATGGATCACACCTATCGCGACTGTCTACTCAATGTGCGGCCCAAGCTGAAGA
        TTTACAAGAGTCTAGAGCAGGCCAAGGCGGCGATTGATCATCTGCAGGAGAAGCTCTATCCGCAGCTAAAGACTACCAAT
        AATGCTCAGGATCCGTCGCTGGGCACAATCAGTGAAATAAGCGAGATAGACGAGGGCGGCACTGATGAGGATTCTGGGTC
        ATCGAATGATCAGCGAGAGCGCCAAGTGTCGGGCCAAGAGCAGGACCAGAGCAACGACTGGACAGAGAACGAGGCGGAGC
        CACCGCTGCCGCCGCTCCCGCCGCCAGAAAAGTCCAAGGAGGACCTGGAGTTCGAGCAATTGTACGAAAAAATGACCACA
        GACTCGTACCAAGAACGGCTTAAGGAGCCGATAAAGGCTACGGCCAAGGATATACCTGTGCCGATGATGGCGCGCCTGCA
        AAAAAAATCGTACGATCAGATAACAGGTGCTCAGACCATCGGCCCTGGGATCAACAATATGTCACAGATCTCAAAGTCGG
        TCCCCAATCAGGACGGAACGCCTGGCTCTCCAGGTGCAGATTCACCAGATGGCAACGGCAAATCCGGCGGCGGTGTAGGT
        GGTAGCGATGTTGGTGCTGCTGGTGCTGCTGGTGCTTCTGGTGCTACATCTGTACCCTTTGTGCTAATGGTGCGCGGCCA
        CAAGGGCGGAAAGCAGCAATTTAAGTCATTTGTGGCACCATCCGACTCGCACTTGGCCACCAACCTAAAGCGGCAGGAGC
        AGATGATACGCGAGGAGAAGGAGAAGGTCAAGCGCCTTACGCTTAACATAACTGAGCGCATTGAGGAGGAGGACTACCAG
        GAGTCGTTGATGCCGCCGCAGCATCGAAACTTCACCCAGAGCTACTACCAGAAGCCCAATAAGCACAAGTTCAAGCACCA
        AAAGGGTGCGCCCGATGCGGACCTCATATTTCACTGAAACGTTGCCCCCGCTAACGGATCCGAAAACAGCCGGTGCCGGT
        GAGTGCGGTAGCTCGCTGGTTTTTTAGGTGACAGCCACTTGTGCGTTTCCCAGCCTCCTTCTGGCCGTCGTATTAATACC
        ACTGTGCTGTTGCTGTTGCTGCTGCTGCTGCAGCTGCAGCTGCTGTAAGGCCTAAAGACTGCGATTGCGATACCACGGAA
        GCGAAATAATACGATGCGGAGAGTAACGCTCCAAGAGCCAACGACTCTCCGCCAACGGAAGAAGCTCCGGAAATTGCGCG
        ATCCCAAACACAAGAGACACACCAACCTCAAGCTGTACTTAAGTCAAACAATTCACAAAACAACAGGCCAACATGTTAAG
        CCAGCCACTCAATCCAAACCAATCCAAGCCAACCAATATACAACAACAGGCCAACATGCCAACATACTAACATACCAAGC
        CACTCAATCGCAGTCGTGGCAGCTGAAGCCCATCCAAATGGACCCTGGGACCTCGTCCTCGATATTATCGTGTATATATG
        TAGAAGTGCTGCTACGATCCCGATCCGTAAACGTATATTTTAACACTACTTAGTACGTAAAAATGCCTAGACTTGTTTCG
        AAAACACAACCCAATTGAATAACAAAGCATATATACAACGATATATACAGATTGTTATATAATGTTACATACACACACAC
        ACACACACACACACACGCATTCGATAATGCCATCCGATGATCCATTCACATTTTTGAATCAAATGCAGAATGCAGTCGGA
        AGTGAATTCGTCTCCATTGGGAAAGCTGTTTGGATGAGCAAATGGAAAGATCCCCCGCCACTGAGTTTCTTCTGGGGATG
        CAGTGAGTCCAGCAAGTCTCGAACTTAGCTCGCTTGTGTATTGGAGTTTTAATTGAATAATTCTCGGATGCCCTTTTGCA
        TTGATGCTAGGTACTTTATCTCATGTTGTATAAGAAATAATAACTTGTAAACAATTGATCCAAATTTCTGTACTCAAATT
        TCGCATTATTTCCATCCGATGAATAAATAAGATACACG
        
        Other Products of this Gene
        Other Transcripts
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        FBpp0071072
        1241
        Derived from OTHER transcripts
        Comments

        Transcript terminates at site supported by polyadenylated cDNA.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (2)
        Reported As
        Symbol Synonym
        CG2253-RA
        Secondary FlyBase IDs
          References (2)