Transcript Dmel\fs(1)h-RA

General Information
Symbol	Dmel\fs(1)h-RA	Species	D. melanogaster
Annotation Symbol	CG2252-RA	FlyBase ID	FBtr0071118
Feature type	mRNA	Associated gene	Dmel\fs(1)h

Evidence Rank	Weakly Supported	Length (nt)	9146
Evidence Score	3

Map ( GBrowse )
Recent Updates
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 52 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	696 33952 41884 42282 54645 59904 60725 60729 61704 64189 80445 80471 177426 214477.18 542457 AI124291 CK01.44C.C3 CK01.75B.F11 CK01.94D.F12 CK01.112C.E1 EC13443 EK058924 EK073756 EK121521 EK122708 EK157038 EK167003 EK180012 EK186308 EK187244 EK189943 EK213622 EK213638 EK282543 EN10643 EN13504 EP09332 GM08283 GM19324 LD09917 LD12150 LD18103 LD18365 LD20802 LD31478 LD38832 LD45355 LD47239 LD47523 LP14617 RH57606
End(s) extend beyond the annotated transcript, internally consistent	EK185853
Sequence
	AAAACGCCTGCTTATATCGATGACAGCCTTGTTTTTGTTGCGCTTACGTT ACGAAATTAATGTAAAGTAGCCGACGAATCTACGTTCTACCAGTATAAAT GGATTAAAACTAACAACAGCATAAGTGTAAACTGCTGGTGAATTTCCCAA ATAGCCATATGAAAAAGCTAAAATTGCAACTTTTTAACAATCGTGTACAA TCTGTATGTTGTATATGTTCAATTCAAAATTCAGCAACAATAGCAACAAC GCAATTCAGCAACAACAACAAACAAAACCGACAAGCTAAACTTGGCTAAG ACAAAATCAACATCCAGCGGCAGCGCGGCCATAAACAAAGCCAAAATCAA AAGTCATTCGGATATATACATATATTCGCCCATAATAGCGAATAAACAGT AACAGAACGAGTGGATTTAACGAAACAACAAAAAGAAAAGAAGAACGATA AAATCCAAAGGAAAAATTTATAGCCGTCTGTGCTGTACTAGGATTTTTGT CAATAATAAGAAAGGATACAAAGCCACAATGACTCTAGTAGCAGTTGTAC TTGTCAAGTCCTTGGCCCTCGAATCAGGTGAAGCCAGCCGATTTCAATGA GAGGAGCCTGGGCCCTGAGAATCTGGAGCAGGCGAGTGCACAGACATTGC TGAGCATGAAGCAATCACTACGGACCACTACACAATTTTATCCCTTGAAC AAGAAGAGATTCTTATCAAAAACCAGAACAGAAGCACCAGGATCAGGAGT TGAAAAAACGATAGGCGGCGGAGGATTACCAGGAGTAGGAGTCGCAAGAA CAGCAGGAGAAGGCGTAATCAGTCGCAGGAGGAGGAGGTGGTCACCGGCC ACATAAGACCAGTTCCCCCCCCTAAACCCACTTTCACCCCCCCTACATAC CCTCTAACGAAGGAATCGCAAGGAGGATCAAATCAGTGGAAAAGGAGGAG AGACGGAGGCGGCCCGTGTGTGTGTGTGTGTGTGTGTAGGTGGAGTGTGT GTGTTGGCCGTCTCAGTCGGATAACCATCAACCCGGATCCTTAATCCCAA GACACAAATCTCAAACTGAAGCACCAGAACCACCACAAGAACCACCACCA CCATGTCGTCCAGTGAGCCACCGCCTCGTTACGAGCCACCCGTGGAGCCA GTCAATGGCATTGTACAGCCACCGGTGATTCCACCAGCGGAGCGGCCCGG CCGCAATACGAACCAATTGCAATATCTGATCAAGACGGTGATGAAGGTGA TATGGAAGCACCACTTCTCGTGGCCCTTTCAACAGCCCGTCGATGCCAAG AAGCTCAACCTGCCCGACTACCACAAGATCATCAAACAACCCATGGACAT GGGTACGATCAAGAAGCGGCTGGAGAACAACTACTATTGGTCCGCCAAGG AGACCATACAGGACTTCAATACGATGTTCAACAATTGCTATGTCTACAAC AAGCCCGGCGAGGATGTAGTGGTTATGGCCCAGACGCTCGAGAAGGTCTT CCTGCAGAAGATCGAATCGATGCCTAAGGAGGAGCTTGAACTGGAGCCGG TCACGGCCAAGGGTGGCAAAAAGAAGCAACGGGCGCCGGCTACGCCCAAG TCATCGTCGGGTGGCGCTGGAGCATCCACCGGTTCTGGTACATCCTCGGC AGCAGTTACCAGCGGACCAGGTAGTGGCTCCACCAAGGTGTCAGTCGCTG CCTCATCCGCACAACAGTCCGGCCTGCAAGGAGCGACGGGAGCAGGCGGT GGATCTTCAAGTACACCGGGAACTCAGCCGGGTTCCGGTGCGGGAGGAGC GATCGCCGCCCGACCCGTATCCGCCATGGGCGGCACGGTTTCATCGACGG CCGGCGGTGCACCGTCCATACCACCGATTAGCACAATGCCACCGCACACG GTACCCGGCAGCACCAATACGACGACGACAGCGATGGCTGGCGGCGTTGG TGGGCCAGGTGCAGCTGGAGCCAATCCCAATGCTGCCGCCCTGATGGCTA GTCTTCTGAATGCGGGCCAAACGGGCGCCTATCCCGGTGCGCCCGGCCAG ACGGCGGTCAATAGCTCCTCGCTTCTAGATGGCAGTACAGCCGCAGTAGC GGCGGCAGCAGCAGCGGCTGCGGCGGCGGCGGCGGCGGCAGGAGGTGCAG CGGGAGCCGCTGGAGGAGCAGGGACAATACCAGCAGTTGCCGTCAATGCC GCTAACGCCGTTCAGGCCTATGTGAATGCGGGCGTGAGCGTCGGAGTGGA CGCCGTGATACCGCCTCAGCAGCCCGCCAAAATAAAGAAGGGTGTCAAAC GGAAGGCGGACACAACAACGCCGACGGCCAATGCCTTTGAATCCCCGTAC ACGCAAATGGACTCCAAATCGGCCAAGATTGCGACGCGGCGGGAGTCGAA TCGTCAGGATCTTACATTCCAGGGCTCGGGATACAATATGTCGCCGCTAG GCGTCTCCGGAGTGCCCGGACTTGGCGGTCTAGTTGCCGGCGGCGTGGCT GGTGTTGCGGTGGCCAAGAACAAGGAGAAGCTGTCGGATGCGCTCAAGTC GTGCAACGAAATCCTCAAGGAGCTCTTCTCGAAGAAGCACTCGGGCTATG CTTGGCCATTCTACAAGCCAGTGGACGCGGAAATGCTTGGCCTGCATGAC TACCACGACATCATCAAGAAACCAATGGATCTGGGCACAGTCAAGCGGAA AATGGACAATCGCGAGTACAAGAGCGCGCCGGAATTTGCCGCCGACGTGC GATTAATATTCACCAACTGCTACAAGTACAATCCGCCAGATCATGATGTT GTGGCCATGGGTCGCAAGCTGCAAGACGTATTTGAGATGCGCTATGCCAA CATCCCCGATGAGCCGGTAGCCAATGCGGCCCACCATCACGGACATGGCC ACGGGCATGGTCATGGCCATGGCCACGGTCACGGGCATGGTCACGGACAT GGTCATGGTCACGGATACGGCGGCTCCTCCTCACTCAAGCACGATGCCAG CGATTCGTCCAGCGAGGACTCCAGCGATACCGAAAACGAATCCAACTCGG ATGAGGAGCGGAGCGCTAGGCTGAAGATGCTCGAGTCCAAGCTGCTCGGT CTGCAGGAGGAGATCCGTAAGCTGTCAGAGGAGGCCTCCGCCAAAAAGAA GGCGAAGAAAAAACTCAAGGAAAAGAAAAAGTCAATAGGCGGCGGATCAG GCTCTGGTTCGGCTTCGCACCATTGTCACGCCACGGGCGGCGGTGCAAAT GCTGGCGGAGCAGGCGGTCCCGGATCAGGCGGCCATGGGAGCGTTTCCGT GCCAGGCGGTGTCGGGTCCTTGGGTCCCGGTGGAGCGGGCGGCGCTAATC TCAACGCGCTGCTCGGTGGCTCATTGGTTGGCCATGGCGGAGCGGCCGTC GCAGGAGGCGTTCCCAATGTGGGTGCGTTGCACAGCCAGGTTCACGACGT GGCCATGGCCTTTAGCCAGATGGCGGGCGGCGGTGCCGCGGCCGGTGCTG GCTTTGGTGCCGGTGTGACAGCAGCAGGAGCATCGTCGGGCGGCAAGGCG GGCACACTGGCCGGCGCTCTGGCAGCGGGCGCAGCGGCAGGTGCCGGCGG TACGACGGCTGGCAGCGGCAGCAGTAAAGGTGCTAAGAGCAAGGGCGGAC GTGGCGCAAAGGGCAGCGGAGCCGGCGGCGTTGGTGCCAGCAATAATGCC GCTGCGGGCAATGCGGCTGGTGGCGCAGCGGGAGCTGCAGCGGGCGCTGG ATCTGTTGGAGGTGTTGGCGGTGCAGGAGCAGCGGGCGGCGGCAATGCCT CCAAGCGGGCCAAGGGCAGCAGTTCGGCGGGCGCTGGCGGTGGTGTTGGT GGCGCGAATGCCAGCGCCGGTGGCGCCGGCGCACGCGGCAGCAGCAAGAA GAAGCCTAGCCAGGTGATGAACTTTGACTCCGAGGAGGAGGACACGGCCA AGCCAATGTCGTACGATGAGAAGCGCCAGTTGTCGCTCGACATCAACAAG TTGCCAGGGGACAAGCTGGGCCGTGTGGTTCACATTATCCAGAATCGGGA GCCATCGCTGCGTGACTCCAATCCCGATGAAATAGAGATCGACTTCGAGA CGCTGAAGCCGTCGACGCTGCGCGAGCTAGAAAGCTATGTGGCGTCGTGT TTGCGCAAAAAAACACGTAAGCCATATTATAAAAAGCCTTCTGGCAAGTC GAAGGACGAGCAGATGGCCGAGAAAAAGCAGGAACTGGAGAAGCGCCTGC AGGACGTCACCGGCCAACTGGGGGCAAGCAAGAAAACCGCCAAGAAAGAT GAGTCCGCTTCGAGCAAGGTCGAGGCAGTGCAGCCGGCGAATCCCGTGTC GTCGAGTTCCAGTTCCAGCGATTCATCGTCGTCGAGTTCGAGTGATAGCA GTTCGAGTGACTCGAGCGACAGTGAAGCAGGTTAGGACGCGTTTTGTTTG TTTGTTTATTTTATACAACTTTTTTTTTATTAGTATACATAGAAATATGC AAATAGAAATATATATATATATATATATATACATATATGTATATATATAG ATACGTTGTTTGAAAAACAAACAGCAAACTCACTAAACACACAAAAACCG ATGCAGATGCAGATACAAGTGCAGATACAGATGCAAATACAGATTGCGAC TTTAGATACAAGACCCACAATTTTATTATATTATCGTTTTAAATTAGGTA ACTATAGATACAAAAAAAAAAAATGAAAAAAACATAAAGCCAAGGGGCGG GGCGGGCGTGGCTTGAGTCAGAGAAGAGAAGATTCGAACGAGTAATGAAC TGTCGTGAAATTGTAAAAATATGTATTGCAAATAAATATGAATTGAATAT AAAACGGACAGAATCAGGAGACTTGAGCAAAGCGATTGGCTTAATTCATT GAGTTGGAAATAAATAGGTTTATCTAGTTGTAATGTAATAGCTACACCAT TAGCACGCCCAAGAGCGTATGCCAATACAGATGATCGTGTTTTTTTTTTT TGCCTAACATTTCTTTCTATTATTTTGTTTAAGTTAGATACGAAAATCAA CACACTGAACTACGAAATAGAAGGAGACAGACATAGACACTGAGTCGCGA GCTGGGGAGCGAGCGAGAGGGGAAATGATAAGGGTATTGTTTCGATTGAA GACGAAGACCGACTGACCAAGAAATCCCGCTCAAAAAAAAAAACGAAAAC GAAAACCAACTTCTCTCTCTCTCTCTCTCTCGCTCGAATAGGGTATCTTG AATTATTGAATTTAGCGCATTTTGTTTATGTTTTCGTGTGCTAAACAACA AAGGAGAATGACAAGACGACCCTTAGACTGCAAAAAATTGAAACTTCCAT TTGCCAATCGTCTGATGACTGATATGAGAGGCCAACGAAAAGGACATCCA ACTCTGATTTAATATTTTTTTTTTTTTCGTTTTTTTTTTCGATCTGTTTA TTTTTACTGAATTGTGTTGTTTTAGAAATGCCCAAGAACCAAGTTCATGA CAAAGTGCAATATGCATTTACTCTAAGAAAACAAATGCACCCGAATATAT GGAGTCTAGCGACGTGAATTGTGTCAGTTGAATCAAAATTTAAATGTATT TAATTCAGATATTTGAGATAAATATTTCGAGACGTAGCCAAAAGCCCATA TGGGAAACAAAACATGTCGAAGATTATTAGTTACATGGCAGAGTTGTTAA ACAAATTTGCTGAGGGAACGTTTAAACTGAGGTTTTTGTTTCGATTCGCA CGTGAACCACATCAGAGTTGGGTGATGATCGGTCAGTATCACAGTATCAG ACGGTTGGAAGGGCCACTCAGTGAGATACATATACACTTATCCATTTGCA TGAAATAGATACACTAAATACAGACGAGAACAACACGAACCGAACGGCAA AACATTATATAAGCGATATGTATGTATATATATATAGATATATATATATA TATATCTAGGTCTAGTACATACTTAATTATATATACACACCCACACACAT ATATATCATATTTAAGCATTTGTAGGTATTAAACGAATTGTATTTGTAAA TGAAAAAAAATCTTACACAACACACATACAAAACTATCTAAAATGAGAAC ATTATGCAAAAAAACACACACACTTTAACTACTTTAAGTCTTTTGAACAA GAAAAACCTTATTATTACCAATATTATGATTATTATTATTATTATTATTA TTATTATTATGATTATTATGATTATGAGAATATGCTGAAAAAATCGTGAA GCAATTGTGTATTGGGGGCAGCCAATTTGAAAAAGAAAGTAATGAATTCC AACTCCAACCAACCAGTCAATCAATCAATCAATCAACCAATCAATCAACC AACCAACCAACCAACCAACAAACCAACCAACCAATCAAACCCAAACCAAC CAATCGAACCAATCAACCAAATATCAAAGCTCCATCAAATCTACAAAGCA GCAGAGCAACAATGCATGATTGATAAAAGATCAACGAATAAATCGAAATA TAAACTTATCATCCACACACACATGATAAGTACTATCAGAAGTACTATCC ATTATGAGTATATATATCTCAGAGGCAGCTTACTAGCAATCTTCATCGAT CATCATTATATCCATTCACCACTCCCCCACTACTAAAATCAAATGTTGAA ATGATCAAGGGTTTTGCACTCTACCAACTAGGCCAGGCCACCAATTAGAC CATACATATATGTAATATGTATCGCATAATAGGCGACTCTAGAACAATCT TCTCCGCCGATTTTCTTTCAGGGTGCAAGTCCCATAGTCCCCGAAACGAA TACTTCTGTGCCAATTTCACATGTTTTTCTAGTCCTGTTTCTTGATAATT CAAATGTGTTAATCCAAGCTCCATTGTGACGATCCCTACTGTCATGCTGT CTGTAAATGTAATAATCCAGCCGATAGGTTTTTTTTTTAGTAAGCTGATC AAAACACGCACATATAAACCACCTACAGAACGTAACAGAACTATGTGTAA TATATAATAATAATTATGCAAATGAACAATAAACATAATAATATAAACTG AATGAACCAAATAGAAGAAATAATTAACATATGCAAAAAACGTATGAAAT TCTCGATACACTTGCAGACAATGTGTAAAAACAAAGAAAGTATGAAAAGC TTCGAAAAGATATGAAATGAGATACTACATCTATACGCAAAAAATTCAAA TACGTAATTCGAAATACAACCTAAGGAGAGAATACGTAAGAGAACAGCAC AGAGAGAATGAGAGAAGAACAGGGGCAAAATTCAAATTAAAATTCGAGGG CAACGAGACATTGAGGAATACTTTCATTTTACTTCTAATTAAGTCGGCTG ACTACTGTAAATGTTAAATTGTGATGTTATTAATTATTTTAACGTTTTTA ACCTCAAAAAAATTTAAAAATATATAAAAAAAAGTGTTTCCAGGTGGAGC GAATGAAACTGAAACACTGCAATTAGCAAAATTCGCAAGCAATAGCTCGC ACTATCACTTTGAACCGCGATTTGCCTAATATCACTCTATAATTGTATAT TCGTATCATTAGTTCGTGGTTAATTGTTTGTTGATGTCATTAACTTAATG TGTAAATGTGGGAGAACCGTCATCCGAAAAAAAAACCGCTTCCAGATCAC TTCCAAGAGGACTCCATGAGTAAAAAACCGAAAAGACAGCTTAATGATAA ATACAAATCAACGGATTAAAAACAAAATATATTGTAAATATCCAAAATCA ATTATCGTGAGCAAAAACAATCGAATACTTAAAGTGGGGTAACGGTATCG TGTTCTTTCATCTATCTATCTCTTTCTCTCTCTCTCTCTGTGTCCTTGCC ACTGTGTCTGTCTCTGTCTGTAGAAGTAACGGTATAACTAACGGTATGAG AGAAGCGGAACGAATCGGAATGGAACCAAGCGTAACGTAAATAGAGTCTT GCTCTATAGCTTACTAAACTCAAACTAGTTCTATATACATAGCTATACTT ACATAGATAGATGTATGCTATACATATGATCAAAAGAGGTATAAAACAAA AACAAATACAAAAAGAAAACAAATAATTAAATGTATTTTAAAAACATTTT ATTATTTATTTTTCGGCTGTCGGCTTTCCCCTTTACACATTGTTTGCACG TTTTTTTCAAAAAAAAAAAAAATAATAAAAATAAATATATATATATTATA TTACGAAAATATACAAAAAAAAAATGCATAGAAGAGATGAGAATGATTGA TGATATGACGAGATGATAATGCAATGGAAATAAAGAAAATTTAAAAAAAC AAATTGCATAAAATCAATTTAAATATAAATTTTTACTATTAAATTAAATC AAATTAAAATCGCCAGGAGAAAAATGAAATAAATTACAAAACCAACAATA ATAATTATTAACAACAACAAACAAAAGCACTTTCCACAACATGTAACAAT ATTTAATTTCAAATTAAAAAAAACTTAACGGTCGAAAGCAAGCAGTTTTT AAAGAGAGCCAATCAGTAAGCAAACAAAGCAGTCAAGAAAAACGTTGAAC TATTATGCCCCAGATTATTTATAGATTTGGATTTTGTTTTTCAAACCCGA TTGCCTGTTCTTCAGGATCCAGACATTTTGTATGTAGTCAGGTCAGGTAG TCGAGGTCACCACACCCTAAAAACGCTTTTTCCAATTCATTTATATGTTT TATCTTGAAAGCCCAATTATTGTAACCTGTTGTTAAAAAAAAAACTGATC AGAGAAATGCAATAACACCAACATTACACAAACGTTAACACGCTTAAAAT CGTTTTGTTAAATGTCGAAAGCAGAATTTTTCGAGCGTTAACATTAAAAT CAAAATGAGGTATGATAAATCAGTGCATTTTTGGTTACAATTTGCACAGG CGACTCACAACAAATGAAGAATAAATAAAATAAGGTATAAAATAAAATAA ATGAAAGGATAAATAGTTAAAATCTTAGGGAAAGAATAAAGGTAGAGGGA ATAAGAAGAAAGGAAGAAAAAAGAGCGGACGACGCGAACTACGTAACGTA ACCCGACACACGAAAACAAATACAAATACAAGCAAACCAACACACACACA CATTTAGCATTATGGAAACACACGCATACATTTAAATATTTATAGT
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) fs(1)h-RB FBtr0071119 8942 fs(1)h-RC FBtr0071120 9034 fs(1)h-RD FBtr0071121 9071 fs(1)h-RE FBtr0071122 8773 fs(1)h-RF FBtr0301309 5081 fs(1)h-RG FBtr0333307 9821 fs(1)h-RH FBtr0333308 9076 fs(1)h-RI FBtr0333309 8716
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) fs(1)h-PA FBpp0071073 1110
Derived from OTHER transcripts	Name FlyBase ID Length (aa) fs(1)h-PB FBpp0071074 2038 fs(1)h-PC FBpp0089297 1110 fs(1)h-PD FBpp0089298 1110 fs(1)h-PE FBpp0089299 1110 fs(1)h-PF FBpp0290524 1110 fs(1)h-PG FBpp0305499 2046 fs(1)h-PH FBpp0305500 1105 fs(1)h-PI FBpp0305501 1115
Comments
	Extended 3' UTR based on RNA-Seq and/or EST data.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_167144
Synonyms
	CG2252-RA fs(1)h-RA
References ( 2 )
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]