Transcript Dmel\Ptp61F-RA

General Information
Symbol	Dmel\Ptp61F-RA	Species	D. melanogaster
Annotation Symbol	CG9181-RA	FlyBase ID	FBtr0072718
Feature type	mRNA	Associated gene	Dmel\Ptp61F

Evidence Rank	Strongly Supported	Length (nt)	2181
Evidence Score	11

Map ( GBrowse )
Recent Updates
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 158 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent	FI19882 LP02164
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	33982 69655 102542 160506 175210 177599 193197 214407.24 522129 AT10282 AT14029 AT14033 AT18821 AT19269 AT20426 AT20873 AT28161 AT31981 Dmel_neb_015829_0339_2113 EC052157 EC052646 EC052647 EC053146 EC053147 EC055680 EC056092 EC056402 EK060807 EK146515 EK177507 EK225635 EK263543 EK279210 EK296426 EN01426 EP08464 FGM101B06 GH26214 HL01022 IP03335 LD08378 LD10932 LD13842 LD15970 LD16615 LD22541 LD22735 LD22743 LD24480 LD26937 LD30437 LD30440 LD31179 LD32012 LD37180 LD37465 LD37740 LD39771 LD43526 LD44050 LD44468 LD44974 LD46183 LD46316 LD46748 LD46771 LD46772 LD47194 LD47476 LD47685 LD47707 RE01370 RE01571 RE03330 RE03988 RE04848 RE04875 RE07716 RE08593 RE12493 RE14948 RE15435 RE15780 RE16167 RE19694 RE19940 RE22367 RE25610 RE25616 RE26057 RE30462 RE30961 RE32854 RE33760 RE34388 RE34895 RE36191 RE36292 RE36528 RE37302 RE38450 RE38550 RE40162 RE40558 RE40607 RE42176 RE46178 RE46319 RE46406 RE46907 RE48366 RE49495 RE49652 RE51395 RE57187 RE57553 RE57761 RE60358 RE61104 RE62285 RE64344 RE64486 RE65760 RE65959 RE66455 RE66502 RE68511 RE68867 RE69721 RE69865 RE70867 RE71566 RE72314 RE73258 RE73353 RE73492 RE74302 RE74405 RE74695 RE74908 RH57536 RH61331 SD02289 SD03405 SD05138 SD12520 SD13664 SD13735 SD25386
End(s) extend beyond the annotated transcript, internally consistent	70993 101272 CK01.59A.D11 EC054824 EK047912 EK199017 EK243561 RE01370
Sequence
	GTGATGTACAATCGAACTATCACTCGGTATCGCACTGCAAATACCGATAG TATTTCGCAAGCTCAAATATTCGATACATCGACACTGTCGTGAGTTGTCC AGCTCTAGTTCTCCTCTGAAATTAACCAGCCGCCTGATAACCAAATTAAA AGTTATTAAATCGGAACAAATCGCAGCAAAGTGTGCACAATGAGCGAGCA GAAAACGAGTGGGAGTGGGTCGGCGGCCGCTGCCCGTCTGCAAATCGAGG CGGAGTACAAGGACAAGGGGCCGCAATGGCATCGCTTCTACAAGGAAATT TGTGAGACCTGCGACCGGGAGGCGAAGGAGAAGCAGTTCAGCACCTCGGA ATCGGAACGCCACACGAACCGCGGCCTGAATCGCTATCGGGATGTGAATC CGTACGATCATTCCCGCATTGTTTTGAAGCGCGGCAGCGTAGACTACATC AATGCGAACCTGGTTCAGCTGGAGCGCGCCGAGCGCCAGTACATCCTGAC CCAAGGACCGCTGGTGGACACAGTGGGCCACTTCTGGCTGATGGTATGGG AGCAGAAGTCCAGAGCAGTTCTCATGCTCAACAAGCTGATGGAGAAGAAA CAGATCAAGTGCCACCTCTACTGGCCCAACGAGATGGGAGCCGACAAGGC CCTGAAACTGCCCCACGTCAAACTCACCGTGGAGCTCGTCCGTCTCGAGA CCTACCAGAACTTTGTGCGGCGATGGTTCAAATTAACCGATCTCGAAACG CAGCAGAGTCGTGAAGTGATGCAGTTCCACTACACCACATGGCCGGACTT TGGCATTCCCAGCTCGCCGAACGCATTCCTTAAGTTCTTGCAGCAGGTTC GCGACTCCGGCTGCCTCAGCCGCGACGTGGGTCCAGCCGTAGTGCACTGC AGTGCCGGAATCGGGCGGTCGGGCACCTTCTGCCTGGTGGACTGTTGCCT GGTACTTATCGACAAGTACGGAGAGTGCAATGTGTCCAAGGTGCTCTGCG AGCTGCGCAGCTACCGCATGGGCCTCATACAGACCGCCGACCAGCTGGAC TTCTCCTACCAGGCGATCATCGAGGGCATTAAAAAGCTGCACGATCCCAC CTTTCTTGACGCTGAAGAACCCCTCATTAGCAACGACACAGAGACTCACA CACTGGATGAGCTGCCGCCGCCATTGCCCCCACGCGTCCAATCGCTTAAT CTGCCACTGGCCCCCAATTCCGGCGGTATACTTTCGCTCAATATGCGCGC GGCCCAGGCTAATGGAGCTGAAAGTATCGGCAAAGAGCTGAGCAAGGACG CCCTGAACAACTTCATTAATCAGCACGACATGATCCACGATGCCGAGGTG GCCGACAGTCGTCCCTTGCCGCCATTACCCGTAAGGGCTTTCAACGATTC GGACAGCGATGAGGATTACTTGCTGGATGACGATGACGAGGACGACACCG ATGAGGATGAGGAGTACGAGACCATTAACGAGCACGATGCCGATCCAGTT AATGGACACGTGCCCGCGACAACACAGCCACATGCCGACGATGTTAATGC CAACAACGAGAAGCCAGCGGTGCCAGTCGACGAGCAGCACAAGGCGAACG GCATCGATCCAATTCCAGGCCAGCTCCCAGCCAGTCCCGAGAACGAGCTG AAGCGGCGAAAACGCAACGAATACCAGGCCAGCCTGGAGCAGAAGGTCAA CGACATGAAGCGGAAGCAGCGGGAGAACGAGGACAAACAGCTGGCGGCAA AGAAACGAAGGTCATTACTCACATATATTGCCGCTGGTGTTGTGGTGGGC GTGATCTGCGCCTACGCATACACGAAGCTAGGTTAAGTGCCCCGTAGCCA CTAAGTAGTCGTAGATCAGTAGTAGCAATAGCTGTATGACGTATTTAGTT GCCGTAGGAGACCGATTCCTCCCCTGATACCCGATTTCCGACTTCCGATC CCCACCTGCTCGTCCGCCTGACCCGGCATCTAATGCGGGCAACGAATCAA GGACGACGTGCAACGGATCGGAAAGGATCAGAGATCGGACGGAATCGCAT CGCAACGCCATGCAATCGCACACGAATTGCGGATGGCGGATTGATTGAGC TGAACGAACGATACAAGATGCATAAATATTAGGGAATTTTTTATATACGA AATACAAGAAGGAAAACAAAAGAAACAAATG
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) Ptp61F-RB FBtr0072717 1901 Ptp61F-RC FBtr0072716 1796 Ptp61F-RD FBtr0072719 2606 Ptp61F-RE FBtr0310161 5159
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) Ptp61F-PA FBpp0072602 548
Derived from OTHER transcripts	Name FlyBase ID Length (aa) Ptp61F-PB FBpp0072601 535 Ptp61F-PC FBpp0072600 530 Ptp61F-PD FBpp0072603 431 Ptp61F-PE FBpp0301846 431
Comments
	Transcript terminates at site supported by polyadenylated cDNA.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_057339
Synonyms
	CG9181-RA Ptp61F⁺R2.8 Ptp61F-RA
References ( 3 )
Research paper	McLaughlin and Dixon, 1993, J. Biol. Chem. 268(10): 6839--6842 Alternative splicing gives rise to a nuclear protein tyrosine phosphatase in Drosophila. [FBrf0058795]
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]