Transcript Dmel\CG8949-RA

General Information
Symbol	Dmel\CG8949-RA	Species	D. melanogaster
Annotation Symbol	CG8949-RA	FlyBase ID	FBtr0074412
Feature type	mRNA	Associated gene	Dmel\CG8949

Evidence Rank	Strongly Supported	Length (nt)	4532
Evidence Score	11

Map ( GBrowse )
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 119 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent	LD32364
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	14811 53114 53344 58466 66389 78859 98079 107501 148055 214409.40 AM04014 CK01.9D.D4 Dmel_dig_006612_0600_0583 Dmel_dig_007528_0676_2067 EC054517 EC056206 EK117537 EK170818 EK173139 EK180919 EK194615 EK205606 EK206223 EK218750 EK223239 EK224115 EK233729 EK253424 EP08058 HL02146 LD05941 LD09903 LD12163 LD19001 LD30940 LD30941 LD37396 LD40648 RE38323 RE52989 RP004046815 RP004052466 RP004053777 RP004055580 RP004060234 RP004062709 RP004092286 RP004097051 RP004109301 RP004115867 RP004119840 RP004128656 RP004129876 RP004132026 RP004133613 RP004185038 RP004200192 RP004204643 RP004207803 RP004212468 RP004213939 RP004214413 RP004215408 RP004216178 RP004216606 RP004226049 RP004226822 RP004227005 RP004233469 RP004233750 RP004241005 RP004242463 RP004245882 RP004252812 RP004253767 RP004255661 RP004257255 RP004263025 RP004265626 RP004299525 RP004301647 RP004305471 RP004307771 RP004308152 RP004318410 RP004362116 RP004367038 RP004396236 RP004398659 RP004403543 RP004406804 RP004420839 RP004429854 RP004436321 RP004473708 RP004484290 RP004508844 RP004510838 RP004529550 SD21007
End(s) extend beyond the annotated transcript, internally consistent	14556 20954 21326 84126 108142 214513.5 CK01.67A.F12 CK01.124B.G5 EK052656 EK094527 EK117031 EK134239 EK135213 EK165960 EK169524 EK174421 EK244624 EP11320 LD09903 LD37396
Sequence
	GCAGCGACCGATTGCTGGCAAACTCAACACAGCCGTGCCGACGAACAGAC CGCACAAAGCGTAATGCAAAAGAATTGAAAAAAATCATCAAGTATAGAGG CCAAAAAGCGAACACAGCAAGTCGGCATATAATTAAACAATTGTCGTTCA ATGCTGAGCAAATAAATGCGGCGATTGCAGCCCAGCAAAGAAGGCGAGCG GCAAATTGCGAATTGCGGAGGCAGCAAAATAAGCCGATAATAAGGCGACC GCAATTCAGGCACACATATACGCCACACAAACACCGAGTCAGCGGGCCAC ACAGACGAAAAGCACACACACACACATGCCACTGAGAGCCTCCCATACAA GCAGACCACAACACACACACACACACATACAAGCGAGCGTGCCTTGGCAG GTGAGAAGAAGAAGAGGAAGCGGTGGAGGCAAAAGGAGGAGCAAACAGGA GGCGCCAAAGGCCCCAGAATATTGGATAAAATCGGAATAAGGCTGCATTA TCTTCTCCACGAGAAGAGGAAGCAGCAGCAGCACTACCAGCAACAGCAGT CGACGAAGGAGAAGAGGAAGCAGACGCATAAGCAGCAGCAGCAGCAGCAG CAGCGGAAGAAGCAGCAGCAGGAGGAGGAGCAGGAGAGAGAGGGAAAACC AACAGAAGCAGCAGCAGCGTATTTGGCGAAAAACTTGCATTGATGGTAAT GCATGCTAGAAAACCGCAGCGTATGAACGATGGGTACTTTGAGAAGCATA CCAGTCACACATCATACCAGAGCTCAAAGTACAGCAGTTCAAAGCGCGAC TACGAACGCGATCGTTCCTCCAATTATCGCGATCGTGACCTGTCGCCAGG CGCTGGCGGTGGAGGAGGCGGCGGATCCGCTGGAGGAGGTGGCGGCGGTA GCGGAAATGGCGGCGGACCATTGAACAATGGCAACAGCTACCGCTCCCAG TCGCCGGACATTGATTCGCCGTCGTCCCGTTCGCACGATCTGCGCGACCG CAGCGATCATCGGGGCGGAGGTGGCGGCAATGGGCGTGGCGGCAGTGGCG AGCGGTACAGCTTTATGCAGAAGATGCGAGATCGAGATCGGGATGTCTAC AAGAAGGATAAATATTCAGATAAACGTGATCGGCGTGGCAACGATCGCGA TTCGGAGTCGTCGTATCGCACCAACCATGATAGGGATCGTCGTGGCGGAG GAGGCAGCGGAGGCGGCAGCGGCAAGCTCTGCTCCTCGCGGGAGAACGAC AAACGATCCGGGTCCGACGATCGCGATCGAGATCGGGATCGAGATCTGCG CGACTTGCGCGACAAGCGGGACCGCGGTTCCGATCGCGACAGGGACATGT ACAAGAAGGACAAGTACGCAGACAAACGAGAGCGCAGCGATCGCGGCGAA CGGACGGCGCGTTATGGCGACTGGAGCGAGCATGTCAGCTCATCAGGCAA AATGTATTATTACAACTGCAAGACGGAAATCTCTCAGTGGGAGAAGCCAA AGGAATGGGTGGACAGAGAAAGAAATTTGCCGCGCGATCAGCATCGTGAG AAGGATTATCGTGACAAGGATCGCGATCGCGACCGCGATGATCGTTTCTC CAGATCAACATACAAACATTCCAATTCTTCGCGGGACAATTCACGACTGA GATGGAATTACGACAACGATGGCGGTCCGCCCAGTCATCGAAGGCGTTTG GATGGTCGACACAACGACAATGCTGACATGGATATAAGCGGCGACTCGAC GCCTACCTCGGAAGCCAGTTACTCGCTAAGCGGCACGCCCACCACACACG GCGGCGGTCCGGGCGGAGGCGGTCCCGGAGGCGGCGGCGGTAGCAACAGC GATCAGCCAATGGGCAATGCCCTGCCTCGTTTGTCCTCCCACCCAACTGC CAACTCCTCCGCATCCGTGGCGACGGGCACAGGTGCGACGGGGGGACTGC ACTACGGCAGCGGAACGGGCGGTGGCCCGGTGACGGGCGCCACAATGCTG CCCACCATGTCGGGAATGCTGAACAGCAACAGCAGCAACAGTGCCGGCGG CAGCAGCAGCAATGCCAGCAGCAGCAGTCTGAGGAACTCCGTTGTCGGTC ACATTGGCTCCACATCTGGCACGACTGTGCCCACACTGGGAAGTCAGGAT CCGCACCAGCATCATCTGAACTCGAATGCTCCACTGCCACCGGGTGCCAA GGGCAAGGATCAGGCGCTGCTGATGCGCCAGAAGATGCACCTGGGCCTGG GCGTCCTCGATGTACAATCACATCACGGCGTTAACTCGGTTGGTTCGGTG TCAGATGGGACCAATCACGCCTACAATTCGGTCAATAACTCGGTCTCCGG CAGCTTACGGGACAACAGCGTAAACTCGCCGTTGTATATGCACCACAGCA TGTCGCCCTCGTTGAACTTCACCAAGAGTCCCATACCGACGATTGTGGGC CACACGAACAACATGAGCATCGCCTACACCTGCAATCCACCCTTTGGCCT CAAGGCTACCCTCGATGGCGGAGTGATGGTGGCGAATGCCTCACCGGCCA CGCCCGGTGGCAACGCCTCCTCCGGCTCCAGTGGAGCGAATAGCAGCCAA AGCATCGTGCCCGGCATGGGCCCCGTCTGCGGAATCAGTGTGATCACCTC GATGGGCAGCAACAGCGGCACGCTATGCGAAGGACCGCCTACGCCCACCC AGGAGCTGGATTTGAGCGGCTCGGCGTTGGAGCAGCAACAGTTGGCCGCC GCAGCGGCAGCCGCGACAGCGTCAAGCCTCCAGCTACAGGCGGCGCAACA GGCCCAGCAGCAGCGGAAATTGGATGGGACGTCGTCGGCCACGCTGAGCT CACTGCAGAGCTGCGTGAGTTCCTCAGGACAGGCGGCAAACCTACGTGGT CCCGAGATTTCGCCAAAGCTGGCCAAATACTTCCGCGCCGATCTGATCGC GCATGTGACCAATTGGCACGCGGAGGTGCTGGAGCGTCAGGCGCAGAAGT GCTGTGAGGATACGCACCTGTTTGGCGACATAACGTGCACGAGGATATGC GCGGAATTGAAGTGCGCCCGCAGCCTGGTGCGAAGCACCGAAATCAATGC CACCCTGCAGGAACAAAAAATTATGTATTTACGCCACCAGATCCGCCGTA TCGAGGAGTCGAAGACTCAGAACGCGTTCATGTCAGACGATACTTAGGAT CAGGAGCAGGTTAGGCTGCGCGTACATCGCAAGCTGTCTGTTAGGCTCAA AAAGAGCTTCTTCTGGCGCAGCTGATGATGATTGCGATGATGATTGGTCG ATTGTGGCCGCCGTCAGCAGCTTGTCCTCGTTTAGCAGGCCCGGATCCAA CCCTATTTATTGAGGGCATCTGGAAATGGCTTAGATGATGACGACGACTG GCGGTGGCCCACGACAATGACTGAGAAACCGCGTGCATCCTGCTCCATCC TCTTACTTCTCTCCTCTGGGCGACGCATCTCTCCCCACCACCACAACCAG CCCGCGATTCACTTGTGTTCGGATCGAGTTCCAGTCCCCAACCGACTATA TAGTGGCAGTATGTAACTGGCTGAGCGGACTGCATGGACTTGGCACAGGA CAAATCAGGATAAATCAACCAACAGCTGCAACAAGAACTTCAACAAGAAA CACAAAAACTAAAACATAATTTATAATTAGCAAAGCGTAAATTAAAAGCA AAAATAAACTAAAATAAGCATTGCATTAAGCAAGACGGAGGAAAAGCCAG AGAAATAGCCACAAATAAAATACAACACCATTCAAGATAACTACAAAAGA AGAATACAGCCAACAGCCGACCTATCAAGATCAAGAAGCAATATGGATAA AGCCTCGTATCGAATCGAATCGAAAGAAACAAAACAAAACAAAAGGATAA ACAAACGAAATAGGATCAACAACACCAGCAAAGCAACAACACCAACAAAA AACAAGTCAACATAGTATACTCAACTGCAATAAAAAGCTAATTAAACTAT ATACAAATTATATATAAACAAATATATATAAATAGAGTATATGAAAGAGT GTATATTTACATCCACCTAACATAAATACGGAGGATAAATCATGATGATA AAATGATTACGATGACAACCAAAATGCGAGTCAAGTCGAACCGAATGCAC GCTTCTCGGGACGAGGAAATCGACAATTTTATATATATATATTTATTTGT ATATATATTATTTATAGGTTTGGCAGCCACCACACTTCCCACATTTATTT TTACAGTGCGATCGAAATGTTTGTTTAATCTGCTGATCATCGGCTTGGTA TCCTGCTAATTGGTGCAGAATTTATATCTTGTTTTGTAGTTATTTACCGA TTACAATTCATGTTTTTTATTTTAAAACTATAAGCATAAAAATTTATATT TACAACACACCATATTCTTTAACCTCCGATTCAAATTGCAGATAGATTTG TTTTAGTTTAGTTTTTTTTTGTATGCACTACATTAATGTCTTTATGATAT ATGATCGTATATATATATATATATTTTATTAT
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) CG8949-RC FBtr0304839 4440 CG8949-RD FBtr0304840 4833 CG8949-RE FBtr0310524 4571 CG8949-RF FBtr0310525 4624 CG8949-RG FBtr0330596 4532
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) CG8949-PA FBpp0074186 834
Derived from OTHER transcripts	Name FlyBase ID Length (aa) CG8949-PC FBpp0293379 832 CG8949-PD FBpp0293380 834 CG8949-PE FBpp0302661 838 CG8949-PF FBpp0302662 876 CG8949-PG FBpp0303447 860
Comments
	Transcript terminates at site supported by polyadenylated cDNA.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_132959
Synonyms
	CG8949-RA
References ( 2 )
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]