Transcript Dmel\Rip11-RA

General Information
Symbol	Dmel\Rip11-RA	Species	D. melanogaster
Annotation Symbol	CG6606-RA	FlyBase ID	FBtr0074616
Feature type	mRNA	Associated gene	Dmel\Rip11
Created / Updated	2004-06-05/2008-07-10

Evidence Rank	Strongly Supported	Length (nt)	3812
Evidence Score	11

Map ( GBrowse )
cDNA Clones Consistent with the Transcript ( 31 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	EP16310 LP03012 EK202608 EK249614 RE36988 AT29803 EC052187 AT02350 EN02120 RE32454 HL01042 AT29188 GH04354 RE25347 RE07773 EN14932 GH22179 EN02921 GH12155 EP08455 RE23902 LD08376 SD28073 GM03238 EN11221 LP03342 SD15147 RE37993 SD13535
End(s) extend beyond the annotated transcript, internally consistent	RE44258 RE03602
Sequence
	ACTCTAGCGGCCACCTTTCAAACAACAACATCACGCGTCGCGTCTCCGTC TTTTTCCTTTTTTTTTTTACATTAGACTACACTACGTTCTCCTGGCGTTT CGTTCGTGTCGCGCGTGATTAAATTGGCAACTGAGAACAATAAGAAGAAA TCACAGTGTGCGAGCAGCAACAAACACAACGATTAGTGTAAACAAAACAC ATCGACAACAACAATCCAAATTACAATATAGGCAAAGAAGAAGAAACGAA AGGCAGGACCTTCGCAGCAAGAGCGAGACAGCAAAGGATCGGGATCGGGA GAGAGCGTGAGAGTGCGACTTGATCAACGGGATACAGGGTGACATGTGGA GTCCGACGCACTGTAGTGTAACGGTGCAGCGAGCGCGTGGGCTGCTCACC AAGGGCAAGAATGGCACCAACAACTGCTTCGTCACCATTGCTCTGGGCAA GGAGAAGTACCAGACGTCCGTCAAGGACAAGGCCGAGACGAGCGTCAACT GGAACGAGGAGTGCGAACTGAAAATTCCCGATCAGGGTAATCGCGCCGAG CTCACTTTGACCTGCCTGCACAGGAACAATCTGGGCATCGATGAGTTCCT CGGCCAGGCGACGCTGCCGCTCAACGAGATGGATGTGTATGACCGGCCAC GCGCCAAGTGGTTCAAGCTGGAGAGCAAGCCCGGCAAGGAGAAGAAGAAC AAGGAGCGGGGCGAGCTGGAGGTGCGCATCGCCTTCGTGGTCAAGTCCGG CTCGCTGACCGATCTCAGCAAGAAGGACAAGCACAAGTCTTCCATTGGCC AGCTGGCCAGCTCCGTGGGTGGCAGTCTGTTGTCCATCGGCAACGGCGAG AAGCGGCGAGGCATCAAGAAGCTGGCTGGCTCGCTTAGCTCTAAGCTGCA CATCCGTAGCAAGAAGAAGAACCAGGAGGCGGGCGCCGACGATAGTAGCT CCTTCGGCGGCTCCTTCGCCAGCCTGGGCACGCCCAACAGCTCCAACGGC AGGGGCCAGAATGGTGGCAGTGGCAGGCGACGTGGCGGCCAGCGGGCGGG CGAAGCCGATCCCGGCGTGATCAGCGAGGACGAGGACGAGTTTGTGTTCG ACAACCTCTCGCACAAGAGCTCCGGCAGCTCACTTAACATCCAACGCATC GGCCTGCAGCCGCCGCCAGTCGGTACGCCCAACTTTACGCCGCGCCACCC ATCGCCCCTGCTGAACAACGGAGTTAGTGGCGTCGGAAGCGGCAGCGCGA AAGGTAAGCAAGCGGTTTTGCCAGCGACGCTCGATGAGGATGCGTCCATC GACGCGGAGATGGAACAGCTTGAGCTAGATTTCAGTGTTCGTGCCCACGC CCGCGCAAACGCTAACGCCAGCGCCAGCGGAAATGCCAGCACCCTGCCGC CTCCCTCGAAACCACCGCGCATTCCCCTGTCGCAGGTGGACGAGCAGCCG GCTGCCGGGAGTCTGGAGCGGGAAAAGCCAAAGGAGAAGCCAGCCGAGGT GGAGAGCGACAAGGACGAGTGGGCGTCAAAGTTGTATGGCGGTGGAAAGT ACCTGGAGATCGGTAGCAGTAACTCATTGAAACGCCGCAGCTGGGAGGAC CGAGTTCCACTCCCCGCCAGTGTTGAGGAGCCGCCGCCATTGCACTCGTC CAGTTCGTCGTCGAGTTCCAGTTCGGATAGCGATGACGATGACGAGAAAC CGCCGCAGGCTGCTCCCCCACCAGTACCCGTGCCGGCTTCTCTACCAGTT CCATCTGCAGCTGCTTCTACTGCTTCTGCTGACCCAGTGGTGGCTACTTC ATCGTCGCTCTTCTCTCCCGACGTGGAGCACCGCAACTTTGATACCTTTA ACGCCAGTTTCGCCAAGTACGAGCAGCGAAACAGCACTGCTATTTTTGCA GATGAACCCGAGCTGGAAGACCTGACAGTGGAGCTGGAGAAGCCGGCGCC CACTCCCACAGCACGCCCCAAACCGCAGCCACGTGCTACGGCCGATCTGA GGGCGGAGGAGGAGAAGGCTAAGGAAGAGGCTGCACGGCAACTGCGTGCC GAGGAGGATGCACGCTTGGAGGCAGAGCTGCGTCTGAATGAGGAGCGCCT GCGCGAAGAAGAGGAGGCTATGCAGCGAGAGCTGGAGGAAGAGAAGGAGC GCCAAAAGCAGCTGCAGATGGATGAGCAGCAGCGGCGTGAGGCCAAGCGC TGGGAAGAAGATCAGAGGCTTTTGAGCTTTGCCAAACGATCCACATCCCT CGAGGAGCCAGTCCCAGAGAAGCAGGAGCTGAAGCATGAGAGGGAGCTCG TGGCCAAGCAGGAGCCGGAGAAAACGCTGGATACGGCAGAGCCGGAGCCG GAGCACAACTTCCTAACGCCCGAACAGTCGCCCAAGGAGTTCCAGACGAA TGGCAGTGGCAGTGGCAGCGGGGAGCGCTGGGAGAAACGACTGGGCAAAT TCAAATACGGCAACAAGCGAGATAAATACAACAACGACAACGACAGCAAC TCGCCCAGTCCCAAGTCTACGGAGCGCATCATAATTGGTCACGAGAAGTC GGGATCGCATGCGGATCGCCGCTCGGAGATATCCGCCCAGCTGGCCAAGA AATACGAGGGCAAGTCGCGCGAGGAACTAATGCTAATTGCCAACGGAATG GAGAACGAGGCTCTGCTGCAGCGGCAGCGCGTGAAGGAGCTGGAAGACTA TCTGGACAACCTGCTGCTGCGCGTGATGGAGACGCACCCGAAGATCCTGC AGAATCCGTATTCGCGCACCACGTCCGCCAAGAGGTACGGCACCTGGTCG TTCTGGTCGTCCTCTCGTACTAGAGCCACGCCCACCCACTAACCAACTGC ATGACCCTGACCGCCGTTATAAAAATTACATCAATATGAATGACTTTCTA AAGTAAGTGCTGCGCATGTTGCAAATTGCATTTAAGTAGACACTTAACCA ACAAATCCCAACAACAACAACATCACCACCACCAACAACAACACCACAAC CCCCAACAACAACAACAACGACGACAACAAGAACAAGAACAACCAGAACT GCGAGACACGAGTAACTAGAACTATAAACACCGCCGGCCGAGAAAGAAGT AAAGGAACCAATGAGGCGGGATCGAACGGCTAAACAAACAGCCAAACTGG CCGTCGCCAGCAACCGGTTCACTTGTCGCAGAGCAGCTGGAGAAGATCTG CGGAGGTTGCTCCGGAAGCTGTTGGGTCGAAACGAATCGAAACACCACGT TGCCTTTGCCGCGAACAGCAAAATTCAAGTGCTTTCTAAAACGTATTGCT AAGAGGGAAACTAAGTGCACGCGTAAAACAGTTAGGCTTAAGGAGTGCAA AATCTATATTGATATTTTATTGTGTGTAGCATTCGTACTTTTTCGGTTAG AAATTCCCCTCCCCCCCACACACACACACACTAAACAGAACTAAATTTGT TGTACTATATGTTTATCCTGGCAATTGAAGCGATTTGTCGTGTTGCGAGT CCTTGTCAATTGATTGAAATTATCCGAAAGTATTGTGTTTGTTTTTTTGT ATGACCCATTTTTTTTTTTAGTATTGTGCGACAAGAGTTTGAGAAGTTTC TGTAAAGTGCTGCCTGGGAAGTGGCCTTAGTGAATTAAGTCTTAAATTAT TTATGTTTTAGCGGTTAAGCGAAAAGTGGGAAAGGGGGACCATCCACGTA TGTCCCCCGTGAAAAAAAGAACACCACACACAGTTGAAATATGTTGATAC TACAATGATTTTACTTATTGATATAAACGCAAGCAAAATAAAAACATTTT TAACATAAATAA
Other Products of this Gene
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) Rip11-PA FBpp0074387 832
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_133085
Synonyms
	CG6606-RA l(1)G0003-RA Rip11-RA
References ( 2 )
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]