Transcript Dmel\Pfrx-RG

General Information
Symbol	Dmel\Pfrx-RG	Species	D. melanogaster
Annotation Symbol	CG3400-RG	FlyBase ID	FBtr0074716
Feature type	mRNA	Associated gene	Dmel\Pfrx

Evidence Rank	Strongly Supported	Length (nt)	2930
Evidence Score	15

Map ( GBrowse )
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 65 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent	GH17337
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	51035 51443 54823 65957 214249.60 214441.64 CK01.32D.F12 EK028154 EK100703 EK130343 EK162113 EK180723 EK193343 EK222317 EP15064 GH01144 GH01220 GH07165 GH18141 GH20981 GH23519 GH26943 LP07609 LP16864 LP17447 RH46869 RH54623 RP004068613 RP004069446 RP004085188 RP004122183 RP004125481 RP004195597 RP004250528 RP004267368 RP004309640 RP004314052 RP004445470
End(s) extend beyond the annotated transcript, internally consistent	17756 18771 19282 28076 28485 31017 39796 99543 106343 190870 CK01.12B.D7 CK01.51C.F4 CK01.100B.B8 CK01870.3prime EC30623 EK013616 EK040854 EK088928 EK132323 EK133721 EK135742 EK136421 EK161908 EK215002 EK236012 EK293059 GH26943
Sequence
	CGACGTGTACGGAACTGAACTGAACCGAACTGAATTGATACGCGGTTCGG CGGATTCGCTTTGTACTTTCGTTTCTTGTGCTGTTCTGTGTGCTGTGCGC CCCCACATCAATATCGAGTCAAAATCAAGTCAAAATACGAGAATTCGTGT GTTTTTTCTCTGTTCTTTTTTTTTAACTATTTTGTTTTTTTTTTATTATT TGCGTACTAAGAAATTAGCGTTGTAGCAAAAGTAATCTGTGATTTTTTTT TCCGTTCTGTTTTGTTTACCTTTGGCTTGTAACGATTCAAAACAAATAGC AAATCGCGTGATTAAGTGATAAAGTGGCCAGAAGTCGGTGGTCGGGCGCT CTGCACACTGCTTGCATTCAGCGCGCGCCTGCACTGCTTGCATTCCAGGG CAATGGCTCAGTCGACGGCAACGGCGCCGCTCTACGCCGGCTACAAACCC CTGATCAGCTCGGTAACCACGGATACGGATCCGGATCCGGATATGGCCCC CTCCCTGTCAGCAGAAGGAACAGCTGATCAGCCCCAAAAATCACAGAGAG AAGGCGAAGTGAAAGGAGCATCATCAGAAGCCCAACGAACAAAAGCAAAC CCAAACCAGATACTTTCAGCCAGCAACAGCAGCTCAATCGACGAGCAAGA CGAGGATCAAGTAGGAACATTGCCATTGCCCCTGCTGTCCATCAATAGAA GGACACCCACCCTGCTCCCCCGCCCCGTTCCACCATCATCGACCCGATTC ACATCGTCCTACAACGACGACCTGTGCACGTGCAGCAACTGCGCGTACTC CAGTTTCTCATCCTCCTCCTCCTCCGCCTCGTCCACATCCTCGTCATCCA CGAGCGCTACAGCAGCAGGAACAGCATTAGCATCAGCAGCCGCATCCGCC GTTGCCAAGAAGCTAGCACGCTCCGTGACCGCCACCAGCATCATGGACAT GCCGTACAACACCTCGCCGTCGCTACGCGTGCGCACCACCTCGCTGAATC AGCTGAAGAAGACCGCCGACCTGGCCATCGAGAATGAGCTGCACGTCTGT CCGTCGGTGATGTCCGAGGAGCTGCGCAAGCTGCTGCCGCCCACCTCGGA GACCGTGATGACCAAACCCTTCCCCATCCGGGGCGAACGGACCATTGCCG ACTGTACCACGCCGCATGTGATCGCCATGGTTGGCCTGCCGGCGCGCGGC AAGACCTTTATCTCCAAGAAGCTAGCGCGCTACCTCAACTGGATCGGAAT CTCCACGCGTGTTTTCAATCTGGGCGAGTACAGGCGTCATGCAACCACAG CATACAAGTCGCACGAGTTCTTCCGCGCCGACAACGAGGAGGCGATGGCC ATCCGCAACCGGTGCGCCAATCAGGCGCTGCACGACTCGTGCGATTGGCT GCTGAGCGGCCAGGGAAGCATCGCCGTGTTCGATGCTACCAACTCTACGC GCGACCGTCGCCAGCTGATCCACGACATTGTCGTGAAGCAGCATGGTTTC CGCCTGTTCTTCGTCGAGTCCATTTGCGACGATCCGCAGATTATCGAGCA GAATATTCTGGAGGTAAAGGTCAGCTCACCAGATTACCTTAACATGAACA CGGAGCTGGTGGTGCGGGACTTCCTGCAGCGCATCGAGCACTACGAAGAG CGCTACCAGCCCATCGACGAGGTTACCGAGTCGCACCTCAGCTTCATGAA GGTGTACAACGCCGGCAAGAAGGTGGTCGTCTACAATAACGAGGGTCACG TGGAGTCGCGCATTGTCTACTACCTGATGAACATCCACATTACGCCGCGC ACCATCTACCTGACGCGTCACGGCGAGAGCGAGTACAACCTGAGCGGGCT CATCGGCGGCGACTCGAACCTGAGCGCCCGTGGCCACCAGTATGCCAATG CGCTATCCACTTTCATCGCCCAGCAGCAGATCGACGGTCTGCGCGTGTGG ACGTCATGGATGAAGCGTGCCATTCAGACGGTGGCCGATGTGAAGGCGCC GCAGGAGCGCTGGAAGGCGTTAAACGAGATCGATGCCGGTCATTGCGAGG AAATGACGTACGAGCAAATCAAGGAGAAGTTCCCCGAGGAATTCAAGGCT CGCGACGTTAACAAGTTCGCCTATCGCTATCCGCGCGGCGAGAGCTACGA GGATCTTGTGGCTCGACTGGAGCCGGTCATCATGGAGCTGGAGCGACAGG GCAATGTGCTGGTTGTTTCGCACCAGGCGGTGCTGCGCTGCCTCTTTGCC TACTTCCTGGACAAGTCCGCCGACGAGCTGCCCTACCTGTATGTGCCGCT GCACACGGTCATCAAGCTGACGCCGGTGGCCTACGGCTGCAAGGTGGAGC ACATCAAGTTGCCCATCGATGCGGTGGACACGCATCGTCCCAAGCCTAAG ATTCCCGGCGACGTCAGTGAGCCAGGACTGGATGGCCTCAGCGGCGAGCT GGTGGCACCCGATGGCGTCGGCAAGGTGCTCATTGTGGGTGACGATGTGG CGACGGCCACGAACGGCAATGGCGGGCGCGTCGATGTCCAGGCGCACCAA TGACGGCGTCGCCTGCACCCCGTGCATCCACATCCACCTCCGAAATCCAA GACAATCTAAGCACGGCTGCTGGAACGGCTACGGCTGCCCCAACCTCCAA GACACTTGCCCGCCAACCCCGCCCCCCCAAATCCCAGAACAGATCCCGCA CTAATTCTTCCCCCAGCGCATCCCGGACAGCCCAACTGAAACGGACAAAG ACACGGACGTGGTCATGCGAGGGCAACACTGACAACTGCTCCTGCACCTG CTCCAAGGATGTGGTGGCATCTCTACTTAACGTGGCGTCGAAGGACTGCG TATGAAATTGTGATTGATCCATTGTGCTGTTTTATTATGTACTTTAATGA ACGATTAAATATTTTTAAAATTTTCTAGAA
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) Pfrx-RA FBtr0074714 2981 Pfrx-RB FBtr0074717 3376 Pfrx-RD FBtr0074719 2983 Pfrx-RE FBtr0074720 3193 Pfrx-RF FBtr0074713 2912 Pfrx-RH FBtr0074718 2980 Pfrx-RI FBtr0074715 2978 Pfrx-RJ FBtr0307192 3061 Pfrx-RK FBtr0307193 3197 Pfrx-RL FBtr0307194 3383 Pfrx-RM FBtr0339439 3031 Pfrx-RN FBtr0339440 3373
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) Pfrx-PG FBpp0074485 716
Derived from OTHER transcripts	Name FlyBase ID Length (aa) Pfrx-PA FBpp0074483 536 Pfrx-PB FBpp0074486 716 Pfrx-PD FBpp0074488 536 Pfrx-PE FBpp0074489 536 Pfrx-PF FBpp0074482 536 Pfrx-PH FBpp0074487 536 Pfrx-PI FBpp0074484 536 Pfrx-PJ FBpp0298021 536 Pfrx-PK FBpp0298022 536 Pfrx-PL FBpp0298023 536 Pfrx-PM FBpp0308526 536 Pfrx-PN FBpp0308527 715
Comments
	alternate polyadenylation site used.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_058103
Synonyms
	CG3400-RG Pfrx-RG
References ( 2 )
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]