Transcript Dmel\Hr78-RC

General Information
Symbol	Dmel\Hr78-RC	Species	D. melanogaster
Annotation Symbol	CG7199-RC	FlyBase ID	FBtr0078390
Feature type	mRNA	Associated gene	Dmel\Hr78

Evidence Rank	Strongly Supported	Length (nt)	2311
Evidence Score	11

Map ( GBrowse )
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 37 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent	AT13850 FI19919
End(s) extend beyond the annotated transcript, internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	54385 65735 121339 125563 162756 569446 AT01120 AT07622 AT08877 AT09148 AT10039 AT11678 AT15618 AT20368 AT26936 AT29853 AT31031 bs60e02 CK02495 Dmel_dig_006135_0710_1957 EC38572 EK179424 EK193418 EK247516 ESG0113a.B21_E12 LP11304 RE70580 RE71560 RE73926 RE74030 RH50703 RH65509 RP004250347
End(s) extend beyond the annotated transcript, internally consistent	CK02430 SD16290
Sequence
	ACTGCGGTCACACTGCTCGCAAGTGAATTGGAACAAGGAGATTTTATTGC GTTAGAAAAGGTTCAAAATAGGCACAAAGTGCCTGAAAATATCGTAACTG ACCGGAAGTAACATAACTTTAACCAAGTGCCTCGAAAAATAGATGTTTTT AAAAGCTCAAGAATGGTGATAACAGACGTCCAATAAGAATTTTCAAAGAG CCAAATGTTTGGGTTTCAGTTATTTATACAGCCGACGACTATTTTTTAGC CGCCTGCTGTGGCGACAATGGACGGCGTTAAGGTTGAGACGTTCATCAAA AGCGAAGAAAACCGAGCGATGCCCTTGATCGGAGGAGGCAGTGCCTCAGG CGGCACTCCTCTGCCAGGAGGCGGCGTGGGAATGGGAGCCGGAGCATCCG CAACGTTGAGCGTGGAGCTGTGTTTGGTGTGCGGGGACCGCGCCTCCGGG CGGCACTACGGAGCCATAAGCTGCGAAGGCTGCAAGGGATTCTTCAAGCG CTCGATCCGGAAGCAGCTGGGCTACCAGTGTCGCGGGGCTATGAACTGCG AGGTCACCAAGCACCACAGGAATCGGTGCCAGTTCTGTCGACTACAGAAG TGCCTGGCCAGCGGCATGCGAAGTGATTCTGTGCAGCACGAGAGGAAACC GATTGTGGACAGGAAGGAGGGGATCATCGCTGCTGCCGGTAGCTCATCCA CTTCTGGCGGCGGTAATGGCTCGTCCACCTACCTATCCGGCAAGTCCGGC TATCAGCAGGGGCGTGGCAAGGGGCACAGTGTAAAGGCCGAATCCGCGGC CACGCCTCCAGTGCACAGCGCGCCAGCAACGGCCTTCAATTTGAATGAGA ATATATTCCCGATGGGTTTGAATTTCGCAGAACTAACGCAGACATTGATG TTCGCTACCCAACAGCAGCAGCAACAACAGCAACAGCATCAACAGAGTGG TAGCTATTCGCCAGATATTCCGAAGGCAGATCCCGAGGATGACGAGGACG ACTCAATGGACAACAGCAGCACGCTGTGCTTGCAGTTGCTCGCCAACAGC GCCAGCAACAACAACTCGCAGCACCTGAACTTTAATGCTGGGGAAGTACC CACCGCTCTGCCTACCACCTCGACAATGGGGCTTATTCAGAGTTCGCTGG ACATGCGGGTCATCCACAAGGGACTGCAGATCCTGCAGCCCATCCAAAAC CAACTGGAGCGAAATGGTAATCTGAGTGTGAAGCCCGAGTGCGATTCAGA GGCGGAGGACAGTGGCACCGAGGATGCCGTAGACGCGGAGCTGGAGCACA TGGAACTAGACTTTGAGTGCGGTGGGAACCGAAGCGGTGGAAGCGATTTT GCTATCAATGAGGCGGTCTTTGAACAGGATCTTCTCACCGATGTGCAGTG TGCCTTTCATGTGCAACCGCCGACTTTGGTCCACTCGTATTTAAATATTC ATTATGTGTGTGAGACGGGCTCGCGAATCATTTTTCTCACCATCCATACC CTTCGAAAGGTTCCAGTTTTCGAACAATTGGAAGCCCATACACAGGTGAA ACTCCTGAGAGGAGTGTGGCCAGCATTAATGGCTATAGCTTTGGCGCAGT GTCAGGGTCAGCTTTCGGTGCCCACCATTATCGGGCAGTTTATTCAAAGC ACTCGCCAGCTAGCGGATATCGATAAGATCGAACCGTTGAAGATCTCGAA GATGGCAAATCTCACCAGGACCCTGCACGACTTTGTCCAGGAGCTCCAGT CACTGGATGTTACTGATATGGAGTTTGGCTTGCTGCGTCTGATCTTGCTC TTCAATCCAACGCTCTTGCAGCAGCGCAAGGAGCGGTCGTTGCGAGGCTA CGTCCGCAGAGTCCAACTCTACGCTCTGTCAAGTTTGAGAAGGCAGGGTG GCATCGGCGGCGGCGAGGAGCGCTTTAATGTTCTGGTGGCTCGCCTTCTT CCGCTCAGCAGCCTGGACGCAGAGGCCATGGAGGAGCTGTTCTTCGCCAA CTTGGTGGGGCAGATGCAGATGGATGCTCTTATTCCGTTCATACTGATGA CCAGCAACACCAGTGGACTGTAGGCGGAATTGAGAAGAACAGGGCGCAAG CAGATTCGCTAGACTGCCCAAAAGCAAGACTGAAGATGGACCAAGTGCGG GCAATACATGTAGCAACTAGGCAAATCCCATTAATTATATATTTAATATA TACAATATATAGTTTAGGATACAATATTCTAACATAAAACCATGGGTTTA TTGTTGTTCACAGATAAAATGGAATCGATTTCCCAATAAAAGCGAATATG TTTTTAAACAG
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) Hr78-RA FBtr0078391 2339 Hr78-RB FBtr0078389 2266 Hr78-RD FBtr0078392 2345 Hr78-RE FBtr0303653 2182 Hr78-RF FBtr0303654 2175
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) Hr78-PC FBpp0078045 601
Derived from OTHER transcripts	Name FlyBase ID Length (aa) Hr78-PA FBpp0078046 599 Hr78-PB FBpp0078044 601 Hr78-PD FBpp0089291 601 Hr78-PE FBpp0292670 601 Hr78-PF FBpp0292671 601
Comments
	Transcript terminates at site supported by polyadenylated cDNA.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_168908
Synonyms
	CG7199-RC Hr78-RC
References ( 2 )
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]