FB2025_01 , released February 20, 2025
Transcript: Dmel\Amus-RA
Open Close
General Information
Symbol
Dmel\Amus-RA
Species
D. melanogaster
Annotation Symbol
CG1239-RA
FlyBase ID
FBtr0078720
Feature type
mRNA
Associated gene
Dmel\Amus
Evidence Rank
Length (nt)
1051
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 18 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        GTCACTCTAAGTTAGAAATTACCGCAAGATGTGGTAAACATTTTAATTTGTATGTTTTTAAAGATATAAAAGGGCAAGGG
CATAAACTCATTGATATATATGTAATTTCACAATGGATTTGGAGAACAACAACAATACGCCATTGACCGGCAAACAAGCC
GAAAAATGTGCGAAAAAGCGAAAATGTGTAATAACATTAGATGAAAAGCAAGTGGAATCCAAAAGACTGAAAAAGGAGGA
ATCAAATGTGGAGGCCACAAGCCGTCCGCCTGCGCAGAGTCCCAAAAAACGGCTCCATCTAAACGGAAAGCCCATGCAAA
ACAAGGACCTTAACTTCAAGTACGGCAACTATAAGCACTACTACGGCAAGCGCATCCTGAACAAGGATTTTCACGACATA
CGCCTGGACGTGCTTGGCACGCAACCGGATTTGTTTCGGAACAAGCAGCTGCTTGACATCGGCTGCAACTCTGGCCACCT
GTCCATCCAGATTGCCAGGAAATTCGAGGTTAAGAGCCTCGTGGGCCTGGACATAGATCGGGGGCTAATAAATGATGCCC
AAAAAACCGTCAGTCACCTGAAACGTCACGCAACCCCGGGGCAGGGGATACCCCACATACAGTTTGTGCACGGGAACTAC
GTCCTGGAGGACGACGTCCTGCTCGAAATTGAACGGCCGCAGTTCGACGTCATACTCTGCCTGTCTGTCACTAAGTGGAT
CCACCTTAATTTCTGTGATTCCGGCCTGAAGCAGGCCTTCAGACGCATGTACCTGCAGCTGCGCCCGGGCGGCAAGCTGA
TCCTGGAACCTCAGTCCTTCGACGGCTACAAGAGGCGCAAGAAGCTATCGGAACAAATAAGAGATAACTACAATGCAATT
AAATTCCGACCTGATCATTTCACCGAATATCTGCTTAGCCCGGAAGTGGGCTTTGCCGAAATGAAACTTATGGGCATACC
GGAGCACTGCAAAGTAGGATTCAAGCGACCGATCCAAATTTTTACAAAGTCGTAGGAAATAAAAAGAAAATCAAGAAATG
AAAATTATCTG
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        Amus-RB
        FBtr0343988
        1058
        Amus-RC
        FBtr0343989
        1052
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        Amus-PA
        FBpp0078369
        300
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        Amus-PB
        FBpp0310437
        300
        Amus-PC
        FBpp0310438
        300
        Comments

        Unconventional splice site postulated (GT-GG).

        Transcript terminates at site supported by polyadenylated cDNA.

        transcript_exception: non_canonical_splice_site

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (2)
        Reported As
        Symbol Synonym
        Amus-RA
        CG1239-RA
        (FlyBase, 1996-)
        Secondary FlyBase IDs
          References (2)