Transcript Dmel\Vha100-5-RA

General Information
Symbol	Dmel\Vha100-5-RA	Species	D. melanogaster
Annotation Symbol	CG12602-RA	FlyBase ID	FBtr0080255
Feature type	mRNA	Associated gene	Dmel\Vha100-5

Evidence Rank	Strongly Supported	Length (nt)	2686
Evidence Score	15

Map ( GBrowse )
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 38 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent	RE70525
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	38290 64430 97273 191115 CK01.83B.E12 CK01.93D.C11 CK01.94D.E4 EC051755 EC052337 EC052358 EC056255 EK064803 EK066201 EK066550 EK073012 EK077803 EK085403 EK150722 EK217303 EK294052 EP21205 LP02274 LP18355 RE12628 RE25192 RE27261 RE42379 RE46308 RE58307 RE64980 RE65840 RE66987 RE68146 RE69712 RP001025785 RP001049383 RP001049590
End(s) extend beyond the annotated transcript, internally consistent
Sequence
	TCGCACAGTTCTTTCAGCGCCGCTGAGGTGGCAGGTCGCGAATAAAAAAT TAGTAACTACCATTTGGAAACATTACCTTTTCACGTAGTTTATAGACACT CGATTTGAACATGGGTGACATGTTCCGCAGCGAGAAGATGGCCCTGTGCC AGCTGTTCATCCAGCCGGAGGCAGCCTACGCCTCCATTGCCGAGCTGGGC GAAAAAGGATGTGTCCAGTTTCGCGATCTGAACGAGGAGGTCAGTGCTTT CCAGCGAAAGTACGTCAACGAGGTCAGGAGATGTGATGACATGGAGCGCC GCCTCCGGTACGTGGAGTCCGAGATGAAGAAGGACGAGGTAAAGCTGCCA GTCCTGCGACCGGAGGAGGAGCCCATTGCTCCCAATCCCCGCGAGATCGT AGACCTTGAGGCTCAGCTGGAGAAGACCGACAATGAACTGCGCGAAATGT CCGCCAATGGAGCGAGTTTGGATGCCAACTTCCGGCACATGCAAGAACTC AAATACGTGCTAGAGAACACCGAGGGCTTCTTCTCCGATCAGGAAGTCAT TAATCTGGACGTCAACCGAAAACTGGACCCCGAGGATCCGGCCAATTTGC CAGGAGCCGCCCAGCGGGGTCAACTGGCCTTTGTTGCTGGTGTCATCAAG CTGGAGCGATTCTTCAGCTTTGAGCGCATGCTGTGGCGCATTTCCAGAGG AAATATCTTCCTGCGGAGAGCCGACATTGATGGGCTCGTCGCCGATGAGG AAACTGGAAGGCCTGTACTAAAGACCGTCTTCGTGGCCTTCTTCCAGGGA GAGCAGCTGAAGCAAAGAATCAAGAAAGTCTGCACGGGCTATCATGCCGC CGTCTATCCCTGTCCCAGTTCGCATGCCGAGCGAAAAGAGATGATCAAGG ATGTGAATGTCCGTCTGGAGGACCTCAAGTTGGTCCTCAGCCAGAGCGCC GATCATCGCAGCCGGGTTTTGAACTCAGCCTCTAAGCATTTGCCACGCTG GTCGATTATGGTGCGCAAAATGAAGGCTATCTATCACATTCTGAACTTCT TCAATCCCGATGTGACGGGCAAGTGTCTGATTGGCGAGGGTTGGGTGCCC ACCAACGATATATCCACGGTTCAGGATGCACTAGCTCGAGCCTCGAAGAT CTCGGAAAGTTCCATACCGGCATTCATGAATGTCATCGAGACGAACGAAA TGCCGCCGACTTACACGAGAACCAATAAATTCACCAATGGCTTCCAGAAC CTGGTTGACTCGTATGGAATGGCCTCATATAGAGAAGTGAATCCGGCTCT TTACGCCTGCATCACATTCCCCTTTCTGTTCGCCGTGATGTTCGGTGACT TGGGACACGGACTGATCCTGCTGCTCTTCGCCTCCTGGCTAATCATCAAG GAAAAGCAATTGTCTTCGATCAAGGAGGAGATCTTCAACATATTCTTCGG CGGCCGATACATCATCTTCCTCATGGGAATTTTCTCCATTTACACCGGAT TCATTTACAACGATGTGTTCTCAAAGTCCATGAATATATTCGGCTCCGCT TGGCACATGAACTATACAAGGGACGTGGTTGAGGATGAAAACCTTAAATA TATCACCCTCAGGCCGAACGATACTGTTTACAAGACATATCCCTTCGGCA TGGATCCCATTTGGCAACTGGCCGACAACAAGATCATCTTTCTAAACACC TTTAAGATGAAGCTGTCGATCATTGTGGGTGTGATCCACATGATCTTCGG CGTCTCCATGTCGGTGGTTAACTTTGCCTACTACAAGAAGTACGCAAGTA TTTTCCTAGAGTTCCTGCCTCAAGTCCTGTTCCTTCTCCTGTTGTTCGGT TACATGGTCTTCATGATGTTCTTCAAGTGGGTCGTTTACAACGACACCGT TGAAGGACCACTTTCACCGGCTTGTGCTCCTTCTATCCTGATCCTGTTCA TCAACATGATACTGCAGGGCAGCCAGGACACTCCTGAGCCCTGCAAGGAG TTCATGTTCGACGGTCAGAAGAGCATCCAACAGGTCTTTGTCGTCGTTGC CATCATTTGCATTCCTTGGATGCTTTTGGGCAAGCCTCTGTACATCATGA TCAAACGCAAGACGAACGGAGCTCCCCCACCAAAACCACAAAGCGGTGGA GGGGAGGGTCATGGAGAGGACGATGAGATGGGCGAGATCTTCATCCATCA GGCCATCCACACCATCGAATATGTCCTGAGTACGGTCTCCCACACGGCCT CATACCTCCGATTGTGGGCCTTATCCCTGGCTCACGCACAGCTCTCCGAA GTACTGTGGAACATGGTGTTTTCCATGGGATTCAAGTACGACAGCTATAT TGGCGGCATTCTCATCTACGTATTCTTTGGAGCCTGGGCGTTGCTCACAG TCGGTATCCTGGTGCTCATCGAAGGACTCTCGGCCTTCTTGCACACACTG CGTTTGCACTGGGTTGAGTTCATGAGCAAGTTCTACGAGGGCGCTGGTTA CGCCTTTGAGCCTTTTGCCTTTAAGACCATTTTGGATGTCAGCGAGGATG ACTAAGGAGCGCGGCACGAGAGGTCAAAGGAGAACGACAGGGCGCAGGAC GCACTTCCTTAAAGCAATTTTCCGTTTATTCCGTTTTATCTTTCGTTTTT TCACGGAAAAATAAATTTCGTTTGATATGCATACAG
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) Vha100-5-RB FBtr0335471 2918
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) Vha100-5-PA FBpp0079839 814
Derived from OTHER transcripts	Name FlyBase ID Length (aa) Vha100-5-PB FBpp0307446 814
Comments
	Transcript terminates at site supported by polyadenylated cDNA.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_135671
Synonyms
	CG12602-RA Vha100-5-RA
References ( 2 )
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]