Transcript Dmel\Mhcl-RA

General Information
Symbol	Dmel\Mhcl-RA	Species	D. melanogaster
Annotation Symbol	CG31045-RA	FlyBase ID	FBtr0083229
Feature type	mRNA	Associated gene	Dmel\Mhcl

Evidence Rank	Strongly Supported	Length (nt)	6686
Evidence Score	11

Map ( GBrowse )
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 31 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent	GH15471
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	60248 72921 146175 166331 214345.4 214349.55 214409.52 AT05283 AT17270 AT17441 AT23332 CK01.7C.B10 CK01.7D.E11 EK010629 EK010818 EK173340 EK184629 EK202262 EK248859 EK271523 EP10261 GH03004 GH04935 GH20309 GH22048 GM10420 IP18060 LP04491 LP08396 LP17007
End(s) extend beyond the annotated transcript, internally consistent
Sequence
	TCAAATTTGATATTCACCTCTTTGGGCACTCTTGCTCAGATTTGTTTATG CAGAACGCGAAGTCTCCTTTGAATCCGAAAAAAAAACAAAAAACGAGTAG CGAATAAAGTGCCCCATTGGCACAAAACGAGCTAGCACCTAAGGACCCCA CACACCACATAAGATGTTCAACTTTATGAAGAAGAGCGCTGGGGATGAGG ACAAGGAGCGTCGCAAGCGCGAAAAAAAACTGCGCAAAGAGGCTAAGGGC ACCTCTGGTGGCCCGGGAATGGGAGGCGTGACTGGCGTCACCGGCAGCAT GAGCACCGACGAGCTGCTCCGCCTGGACGAGGTGCGCCGATCGCTTAAAA TCCGAGGGCGACGCAAGGAGAAGGAAAAGTTGCCGAGCGGAATTACGGCG GACTATAGCGCAGACTTCTTTGCCGCCCTCAATGCAGATGCAAACGGCGG AAGCAACGGAGGAGCAGTGGGAGCTGCAGATCCCGAGCAGGATCGTGGCA ATGAGGAGATTGTAGCATCTGTGATGACGCACATCGAGAGCCGAGCGTCC AATGGCGCCGGCGTGAGTGTCAACTACAGCGAGGTCACACATTCTCTCCT CTCTGGAGGGCTCAAGAATCGCTTTCTTCCACCTATACCCCCAAAACCAC CCAAGCGTGGCATTCTGAAAGGCTCCCGCAGTAATATGACCAATGTCCAC GAGGAGATTAGCTTTGCGGGTAGTGCCGGAGGAGCAGGTGGCACGCCAGA GATGCTATTGCGCAACACCTTTCAGAATGAATCCCTTTACGAGGGAGCTG CCAGGGGAGCTGGTTCGATCGGCTCGAACTCCAGTCAGCATGGAACCTCG TTCACTTCCGTGGAGAGCCTGCGCAGCGATGGAGAGCAGACAGGAGGTCA ACAACGGGCCATGACCCTGCCGGCCAACGCCCGCTATGGAGCTTTACCCC AGGGCAACAGTCAAGGATCGCACCTCCATGTGCTCACCTCGCCGTCGCCC AGCGCCGACAGTCTCACAGATACCACAAACTCCTCTTTCGCCACACCCCC ATTTTCGCTGAGTCCCGTCGGCGAGTCCCAAGGCATCGACCGTTGGGCCC GCGTCCATGCCTTCGAGGATGTGGAGCTGCCGCTGCCGCCAGTGCAGCTA GTAAAACTTCCCCCACCAAGGCAGCTAGTGATCAGGCGACAGAAGTCTCC GCGCCAGGACTTCGGCTTTAGCCTGCGCAAGGCCATCTGTTTGGACAGAA CAGAGTCCCTGACTTCGCCCATTTTCAGGCCGGTTATATTCGCCGAGCCA GGTGCTGGTGGCGGAGCCACAGGTCTTTTGCCTGGCGATCGCCTAATCAA GGTCAACGGCACGCCGGTTGGGGAACTGCCGCGGGAGATCATAATTGAGA TGATACGGAACAGCGGAGAGGCTGTCACCGTGGAGGTCCAACCAGTCGCT GAGTTGGTGGAGCTGAGCAAGCGATGCATGGCCCCCAGCACAGCCACCGT GGAGGAGATCGATCATTCCATTACCAACGGCAACTGCAATACCCTGCGAC GCAGTGCCAGCAAGCGCTTCAAGCGTCAGAGCCGCCATGAGAATGGCAAT GGCGGAGGAGAAGAGGGAGGAGCCAAAGGAGTGGGCCACGATCTGGAGGC GGATGTTGCGGATGCCAGTCAGCCGGAGCGCGTATGGCTGGTGCACCGCG GTGGTTTCACTGCCGCCATCCGTCTGCCGACTGCGTCTTCTGGCCGGGAT GAGGAGAACAAGCTAAGCCTGCGCCTCCTGCATAATGGGGAGCAGCTGAC CGTCGACGAGGACGATGTCGAGAAGCAGAACAGCCCCGCCCTGGACCTTG TCGAGGACATCTGCGAGCTGAAGTATCTGAACGAGGCGTCCGTGCTCCAT TGCCTGCGTCAGCGATACGCCAGCAATCTCATCCACACCAAGGCGGGGCC CACGCTGCTCGTGGTCAATCCCATGGCACCGCTGTCCCTGTACTCCGAGA AGGTTGTCTCCATGTTCCGCGGCTGCAAGACGGAGGATATGCCGCCCCAC GTCTATTCACTGGCCCAGACCGCCTACAGGAGCCTGGTCGAGACGCGGCG CGACCAGAGCTTGATATTCATGGGCCGATCTGGTTCTGGCAAATCCACTA GCTTCAAGCATGCACTCAACTACCTGGCGTTGGCAGCTGGTGCCTATAAT AATTTTATAAACGCGGAGAAGGTCAATGCCCTGTGCACCATTCTGGAGGC TTTTGGAAATACGAAAACTTGCCTAAACTCGAATGCCACGCGGATGACGC AGCTGTTAAGCCTGGATTTCGATCAAACCGGCCAGATTGCATCTGCCTCA TTGCAAGTTCTCCTCCCAGAAAGACAACGAGCTGGCCGACGACTTGGTCA TGAACATAGCTTCCACATCATGACGAGACTTTTGGCTGGCGCTGCTGGCT TGCTACAGAAGGAGCTGCACCTGGAGAACATAACCTCTGAGGACAGCCAT CCTTTTATATCGTTATCCCAAAAGCTGGAAGATCGGCATCGAGCTGCCAA TGACTTTATGCGCACTGTTCAGGCCTTTGAGACGCTGAACATTGATGCGA AGGCGGTACGTGGGATCTGGAGCATTTTGGCGGCCATTTACCATCTGGGC ATTGCTGGCGTCACAAAACTGGGCACTGGCTCCACAGCCCGAACTCAGTT TGCCAATCCCACGGCCGCCCGAAAGGCCTCGGGCTTGTTGGGCGTGAATC TGGAGGATCTGTCATCAGCTGCCTTTGGTCTTACCCAACCAAACGCCCCC AATGGCGGTCTGAGTCCATCGAAATCGCCCACCTCGGACACTGGACACGA ATGGGCCTGGGAATGTCTCGAGGCGTTGGTCATTGGTCTATATTCGGAGG CCTTGGCTGCAGTGGTGGCATTGATCAATCGTCAGATCTGCACATCGTCC CACACCATAGCCTCAATTATGCTAATTGACACGCCCGGCTTCCAAAATCC AGCCAGCTGTGGCCAGCAAGTGGGTGCTACTCTAGCGGATCTGCGTCACA ACTATCTACAGGAGCGTCTACAGATGCTCTTCCATCACACCACACTGGTG GCTCCCCGCGATCGCTACGCCCAGGAGCTGGTAGAAATCGAGATGGACCT GGCATCGGAGTGTCATCCGGGACCGTTGATCTCGCTTATCGACAAGGCAC CTCAGAATCATGTAGTGCGCTCGTCCCAGCGAGATTTGCGAGAGCATGAT CGTCGAGGAATGTTGTGGCTACTGGATGAGGAAGCTATCTACCCCAACTC CAACGATGACACATTCCTTGAACGTTTGTTCTCCCACTACGGTGACCGGG AACATCATAGCCTGCTGCGCAAATGTGCAGGTCCGCGACAATTTGTACTC CACCATCTGCAAGGCACCAATCCCGTTCTCTACGCTGTCGATGGATGGGT GCGTCATAGCCGGGAGCACCCAGGTATTCGGAATGCTGTATCCCTACTAC AGGACAGCAGTCGGGAGGAGATCAATCGCCTATATATCGGCTCACTGACT CGAGGATCGGGAGCAATGGTGTTTTGTGGCTCTTTTGCTGGACTGGAAGG CACTCAGTCACTTCGTCGCGTGTCCAGTATTCGCCGCTCCTTCACAACGG CCGGAGTAAAGCGAAACTCCATAATGCTGCAGGTGAAGTTCACAGTGGAT GGAATTATCGACACTTTGCGCCGCACTGGAACTCACTTTGTGCACTGCTA TCTGCTGCAACATAACGCAGGCAAACATACCAAGTACACCGCCAATGGAT CGCCCAGCTCAGCTGCCGGTCAGGTGTCCAGCGAGGAGGAAATGGTCAAC GTGCCACTGTTAAGGAGTCAGCTACGTGGTTCACAAGTCCTAGAAGCGGC TCGCTTGCATCGCCTTGGTTTTCCCGAATCAGTGCCATTGTTGGAATTTG TCAGGCGTTTCGGGCTTTTGGCCGGGGATTTGGCTAGCAATAAGGATGTG AGCGTGGAGCAGATATTAGCTGTCAATGAACTGGATGTGGCCAGCTATCG CATAGGACCCAGCCAGATCCTCTTCCGCTCAGGAGTTCTTAGTGAACTGG AAGCCAAGCGCGATGTCCTGCTCTCAGATCGCATTATACAGCTGCAAGCA TTTTGCCGCGGCTACTTGGCACGCAAGAAGATGTCCCAACGAAGGGTCCA GGAACTGGCAGTGCGTTGCATTCAACGCAATGTGAAGGCATTCCTTGCCG TTCGCGACTGGCCGTGGTGGCGTCTCCTGGTGCGGGTCACTCCCCTGCTC AACGTTCATCGCACCGAGGAGCAGCTGAAGACGGCTAACGAGGAGCTCCT AATGCTGCGAGCCAAGCTGGAGAAGATCGAGTGTGATCGCAGTGAGGTCA AGGCAGAAAACCAAAAGCTGGAAGCCAAGCTATCCGAGCTGACGGTGGAC CTGGCCGAGGAGCGATCCACGGCTCATATAGCTACCGAGCGGCTGGAGGC GGAAACCGCCGAACGCTTGAAGCTGGAGAAGGAGCTGGGCGATCAAACCA ACAAGGTGAAGAACCTTCAGGAGACGACGGAGAAGCTGGAAATGGAGCTG ATATGCGCCAAGTCCGATCTGAATGGCATCTCTGAGGACGAGGATGCAGA GAACGAGGATGGGGTCGGCGGCGGCGTCTACAAGCTTAAGTACGAGCGGG TGGCCAGGGAGCTGGAGTTCACCAAAAGGCGGTTACACACGCAGCATGAG CACGATCTGGAACAGCTGGTCGCGCTCAAGAAGCATTTGGAGATGAAGCT TTCCGATGCCTACGAAGAAGTTGTGGAACAACGTCAGGTTGTGGGCCAAT GGAAGCGCAAGGCACAGAAGATGACCAACGAGATGAACGATCTGCGCATG CTGCTCGAGGAGCAAAATGCGCGCAACAATTTGCTCGAGAAGAAGCAGCG CAAGTTCGACGCCGAGTGCCAGTCCCTGCAGGATGCAGTGCGTCAGGAGC GACAGGCCAAAGAGCGCTACGGTCGCGAAAAGGACGTCCTGCAGGCCGAG AAGTTCACACTGGAGCAAACGCTGGCGGACACCCGTCTGGATCTTGAATT CAAGGAGGAGAAACTTGCATCGCTACAGCGCGAGCTGGAGGAGATGACCT TTGGTGGCGGCACCGAGGAGGAGTTCGCCCAACTGCGGCGCTCCAAAAAT GAAACAGAGCGTCGGGCCAAGGAACAGGAGGAAGAACTGGACGAGATGGC CGGTCAGATACAGCTGCTCGAACAAGCCAAGCTTCGCCTGGAGATGACCC TGGAAACAATGCGCAAAGAAGCGCGCCGTGAGTCCCAGCAGCGCGACGAA GAGCTGGAAGAAGTACGCGGTAACGGCTACAAGAAGATTAAAGCCCTTGA ATGCCAGCTGGAAACTGAGCACGAGGAGCGGACTCTGCTGCTGCGCGAGA AGCACGAGCTAGAGCGACGTCTCTCCTCCATGGAGGATCGCGATCGTGTT GATCGCGATGCCGAGGAAGCGCTCAACCAAAAACTGCGACGCGATCTTCG CAAATACAAGGCCCTGCTCAAGGACGCCCAGACACAGTTGGAGCGGCTTA AGGCTGACACGCCTGGCAAGACGCTTATAAGACAACTGCGTAATCAACTG GAGGATGCCGAATCTGCTCGTTCGCTGGCTATGAAAGCGCGACAAACTGC GGAAGCCGAACTTACTGAAGTGCAGGCCATGTTCGATGAGTCGCATCGAG CTAGGAATGACGCGGAGGAGCGAGCCAATGCCGCACACAGAGATCGGGCT GAGCTGCAGGCCCAGATCGAGGAGAACGAGGAGGAGCTGGGCGAGCTGAT GAAGAAGTACAGCGCCACGGTAAAGCAACTAAATACAGAGCAAATCAACG TATCCGAGGCTGAGTTTAAACTCAATGAAATGGAAGCAGAGCGCAATAAC CTCAAGGAGCAGGTGGCCGAGCTGCAGCACCGACTGGACAACGTTGAGAA CTTGGGGGATCCATCTATGGCCATGATGTCCAAGCGACTGGAGCTGCGCA CCAAGGAATTAGAGTCTCGACTGGAACTAGAGCAGGCCACTCGGGCTCGC CTTGAAGTGCAGGTGAACCGTCACAAAGAGGCTCTGGAAAAACTGCAGAA CGAGGTGACGCAGTCAAAGATGCGTGAGATGCAGGCCCAGGATGTAATCA AAAAATCGCAAAAGAGTCTGCGCGACATGCGCGAAGAGTTCCACGCTGTC TCCAGCCGCGAGCAGGAGTCGCTCACAAGGCGCAAGGACCTGGAGAAGAA GGTGGAGCAAATGGAGTCGGAGGGAGCGGCGCTTAAAAACGATCTACGAC TGGCTTTACAGCGAATAGCTGATCTACAGCAGGCAATGGAGGAAGAGGGC GAGGAGGAGCTGAGCGAAAGTGATGAAAGCCTCAGTTCGGTGGGCTCTAT CAGTGATCTGGAAGATCGACTTCGGCCAGTTCATGTAAAACGCAGCTCAC AGCAGTCCTTGAACGGCAGCATCGGCGGCGGAGGCGGAAGCGTTGTCAGC TCCACCCGCACCGTGGTGTTCGAAAAGGACGACAACAGCCCGAGAAATAA CGCCAAGTAACGGGAAAGATTCATAAAAACCTTTATAAAAACTAACAAAA CGAATATAAACAAATAAATATATTGTTATAAAACTT
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) Mhcl-RB FBtr0083231 7418 Mhcl-RC FBtr0083232 2923 Mhcl-RD FBtr0083233 4004 Mhcl-RF FBtr0110973 6509 Mhcl-RG FBtr0110974 6782 Mhcl-RH FBtr0303845 2015 Mhcl-RI FBtr0332439 3941
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) Mhcl-PA FBpp0082683 2148
Derived from OTHER transcripts	Name FlyBase ID Length (aa) Mhcl-PB FBpp0082685 2194 Mhcl-PC FBpp0082686 920 Mhcl-PD FBpp0082687 1134 Mhcl-PF FBpp0110273 1923 Mhcl-PG FBpp0110274 2160 Mhcl-PH FBpp0292853 533 Mhcl-PI FBpp0304712 1113
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_169700
Synonyms
	CG31045-RA Mhcl-RA
References ( 2 )
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]