Transcript Dmel\CG31140-RA

General Information
Symbol	Dmel\CG31140-RA	Species	D. melanogaster
Annotation Symbol	CG31140-RA	FlyBase ID	FBtr0084497
Feature type	mRNA	Associated gene	Dmel\CG31140

Evidence Rank	Strongly Supported	Length (nt)	6852
Evidence Score	15

Map ( GBrowse )
Recent Updates
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 16 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent	GH12677
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	15081 29565 45087 214221.20 280891 EK138310 EK160748 EK161424 EK256308 EP01934 GH23120 LP15790 LP24068
End(s) extend beyond the annotated transcript, internally consistent	57651 EK178822
Sequence
	ATCGTCTTCAGCGGAGCACACACAGCAGCTAGGTGTGCTCTTCCCGCCAG AAATTGTAAATAATTAACAGTTAAAAACTCACCACCAAAAGAAAGTTATA AACGAAAACGCTTAACCAAACCAAAGATGCATGAATATGAATCAAAGCAA ATATGATACATAGCCAATATGTATATAGAAACTAGTAAGGATAAATAAAG TTCAAAGCGAGGAAAAACACCGATCCCGACAAGCAAATGTCCGGATAAGG GAGCCGCTACCTGACCAATGGATGAAAATGCAGCCGTCGTCGCCGTCACT TTCGCCGTCGTCACTATCGCATCGCTTTTGTCAGCAGCAACAGGAAAAGT CGGAAAAGCACCAGCAGTACCAGCAGCACCAGGAGCAGCAACAGCAGCAG AAGGAGCAGCAGGATCAGAAGGAGCAGTCCTGCCACGCCCACGCCAATCG AACGCCCTCGGTCGGTACGGCAGCGCTGGCTCAGCTGGCGTCGACGCCCG CACCGGCAGCAGCGGCCTAAATTGCCCAACCGCAAGAATCCCACTTCGAA ATAGCCCATATACACAGCAGCAGGCGATATTGCAACTGCAACACATACTG CACTCGCAGCAGCCGCGAATACTGCTCATATAACTGCAACATCGAGAGAC CTTTGCCGCTGCAAGCGCAACAGCAACTGCAGCTGCAACAGCATCCTCCA GCAGGACAACGCACAAAAAACCCACTACGCATAAGGCAACGGGGCATAAG GAGGCACAAGGAGGCGCAGGAGGATAGACCGGAAGCAGAAGGACAGGAAG TGGGGCGGGCTGCGGACACAGGCAAACAAAATGGCGGATGGTGGGCATTC ATTCGTGAAGAAGACATTTCATAAGCCAACATACTGTCACCACTGCTCGG ATCTGCTCTGGGGCCTCATCCAGCAGGGATATATCTGCGAAGTTTGCAAC TTTATCATTCACGAACGATGTGTCAGCAGCGTGGTAACGCCCTGTTCCGG CATCGCTCCATGTATTATAAAGAATCCCGTTGCCCATTGTTGGTCCGAGC CAACTCATCACAAGAGAAAATTCTGCACAGTTTGCCGTAAGCGATTGGAT GAAACGCCAGCGGTGCATTGTTTAGTCTGCGAATATTTCGCGCATATTGA GTGCCAAGATTTTGCCGTGCCCGATTGCACCGAGAATGCCACGTATGTGC CAGGCAAGGAGCTGCTTAATGTGAAGCATCAGCATCACTGGCGAGAGGGC AATCTTCCATCAACGTCCAAATGCGCTTACTGCAAGAAAACCTGTTGGTC CTCGGAATGTCTCACTGGCTATCGTTGCGAGTGGTGTGGCATGACGACCC ATGCCGGATGTCGCATGTACCTGCCAACCGAATGTAATTTTGGTATTCTA CAACCTATCTACTTACCTCCGCACTCAGTCTCGATTCCGCGCACCGAGGT GCCCATCGAGGCCATCATCGGCGTCCAGGTCAAATCGAAGACTTCGCTCG TGCGCGACTACTCGTGTCCCAGTCCGGATTTGAGCTGCCCGATACCGGGC GCCGGATCGGGTTCACTGACGAGCCTGGGCCTGAAGGAGCTGCTCGAGCT CCACAGGCAAAGGCTTGAGCAATCGAAACAACATTTTCTCCTTTCCACGC CGCCCACGCCCACCTCCTGTGGCTCCATCTCACTGTGCCACTCTCCGACG CCCTCCTCGCTGACAGTCGGCGAGACGAGCAACGAGGCGGAGCAAGATCG GGAGCGGGACCAGGATCAGCCGGAGGAGGAGCCCGAAGAGGAGAACACGG AGCAGGACAGCGCCCTGCAGCTAACCACCTCCACTTCGAATGTGATTGGT AATCTTCAGAAGTGGCCATCGGCCAACTCCTCGCTGCACCTGCTCTACAC GAATCTCTTTCGGAAACTTGGCCAGGGCAAGCGGAGGCGGAAAAGGGGCA TCAGCAGCGGTGGCCTCTCGCCCAGCGAAGATGAAGACGATGTGGACGGC GGTGTCTGTGATATAAGCGGTGGCGATCTGAGCGATGATTACGACCACTG CGACGTTGCCCTGCGGCGGCGATCCCTGCGCAGCCGGCAGCCGCGGGACG TCAGCGAGACGGACTATCACGGGGATGCCGAGGCGGAGGCGGAGGGTGAG ACTGTGCCGCGGGAAAGCTGCTATGAGACGTCGGACACGGGCGGCGAGCT GACCAATACCGATGACCTCGACAGCAGCCTCAATCTGATTAGCAACCTTA GCTATAATAGTAGTAATAATAGCAATGCCTGCAATGTTCCTGGCGGAGCA ACTGCACCCGACGCCAGGAATACCGCCACCACCAGCACCACTGCCCCGGG AAAGTCCGGACACGCCTTGAGCGTCCAGGGCGGACGCCAGCAACCCAAGA CTGGGGCTCTGGCCCAAATCAAACCCAAGCCCAAACCCATACTCATGCCC AAGCACAAGGCGCAGGGCAAGGGCGGCTCCCTCAGCTCTCCGCTGTCCAA CTCCAATTCGAGTGACTGCTCCTCGGCATCGCCCTCTGCCCCGGCTACGC TGCTGCAGCTGTCGCCGGTGGGCAGGAGTAAGTCCTTCCAGGAGTCGGCG GCCATAACGGCTGTGTCGCGCTATAAGAAGTACGGACGCGGTTTGTTCCA GCGCCGACGCTCGAAGAGATCGCCCAAGAATGCGGTCGGTGTGGGCGGCA AGAGCAACTACAGCCTGGACAGGCTGTCGCAGAATATTGAGATCACCATC CAGGACGAGGATGGCAACTTCCATCCGTACGACGACAACTATCATATGCT GGCCGGGCGACTGGACGCCACCGATGTGGACGACGATGTTGGCTTCGATG ATCTCTACCTGGACGACCGGCCGAGCGGGGCCAGTGATGATGTGGCCTTT GCCGGCGACATCAGCGACGGCGGGGCCAGCAGTCGATCGAGGGCCAGTGA CGCCAGCGATGGTCATGTCCTGGGCCGGCTGCTCCGCCAGGTGCGGCAGG GCCTCTCCGTCGGCTGGCGCAAACCGCGCTACCAGAAGCGCAGAGCACGC AGCATATCCGAGGAGTTCAGCAGCGGCGACACACCTCGTTTCAAGGACGA GGAGTCGGCCAGCAAGGCCGAATCGGGACATGGACCCAGCAGTGGTGGTG CAGGTGGTGGAGGCGGAAGTGGCGGTGCTGGAGGCTCATCCGCAGCTGGT GCATCGGCATCGGCTGCCGGTGGCTCCTCCGGGCACTATAGACCCGATTC CGGTTCCGGTCACAAATCGGATAAATCGGAGAAGGATCGCGAGAAGAAGG AGAAGGAGCGCGAGGAAAAGGATATAGAGATGATCAAGGTGTTCGATGGC AACAACTCATTCCGACGCCAGCAGTACCGCGTGATCATCGTGCAGCGCAC CTATACGCTGGAGCAGCTGCTGACCACCGCGCTGCGGGCATTCCACATTA CGCGCGACCCGCAGGCCTTCTATCTGACCGATCTGTATGCACCCGCCGGC ATGGAGGATACTCCGATGCTCGATCCCACGCCCGTGCTAAACCTGGTGCA CCTGGAGGGCAAGCGACCGGCCATATACCTCCGGTTCCACGACCGTGACC GTGGCCATGTGCGCGTCTACCCCGGCAAGCTGCAGTGCTCGATGCTGGAG GATCCCTATGTCAGTGTTCCTGTAGATAATAGCACAGTTATTAAGGATTT GATACGCGATGCCCTGGACAAGTTCGGGCTGCAGGATAACCAGATACAGG ACTACAGGTGCTCGGAAGTGTTGCTCGATCGCGGCGTGACCGAACGCATT TTGTCGTGGAACGAAAGGCCCTGGGATATTATGAAGCAGCTGGGCAAGGA CTCCATTCGACAGATGGAGCTCATGCGGTTCTACATGCAGCACAAGCAGG ATCCGCATGGTCCCAATATCGCGCTGTTCGTGGGCAATCTGCCCACCGGT CTCTCGCAGCGCAACTACGAGCAGATCCTCAACAAGTACGTAACCGACGA AAATAAGTTCATCAGCATCGGACCCATCTACTACGAGTATGGCTCAGTGG TGCTCACCTTTGAGGACTCCATGAAGGCGGTTCGCGCCTTCTACAATCTC CGCGAGACCATTATCGAGGACAAGAAACTGCTGGTTCTGCTCCTGCCGAA CATCGAGCCCAGCATGGTGCCCTCGGATGTGAGACCACTGCTGGTCTTTG TCAATGTTAAGTCCGGTGGTTGCCAGGGATTGGAGCTGATCTCCAGCTTC AGGAAACTGCTGAATCCCTACCAGGTATTCGATCTGGATAATGGCGGTCC TTTGCCTGGGTACGTTCAACCTATAACCGTGTTTGTGATTCGCCCACTTA TCTTTGATTCTATCATTAGTTTGTATGTATTCCGGCAAATAACCAACTAC AAGATTCTGGTTTGCGGCGGAGATGGCACCATTGGTTGGGTGCTGCAGTG CCTGGACAATGTAGGCCAGGACTCGGAGTGCTCCAGCCCACCTTGCGCCA TTGTTCCACTGGGAACAGGCAACGACTTGGCTCGCGTTTTGTGCTGGGGC TCCGGCTACACCGGCGGTGAGGATCCGTTGAATCTGCTGCGCGATGTTAT CGAGGCGGAGGAGATACGGCTGGACCGCTGGACGGTTGTCTTCCATCCAG AGGACAAGCCCGAAGAGCCGGCTATGAAGGCGCCCTCGCAAACAACCGGT AAGAAGAAGAAGGCACACCAAGCACACCTATCGCAATCGCAACAAACCAA TCAGCATCATCAATTACCGGCTCTGACATCGAGTGATATATCAGGCGGTG CCCAAAACGAGGATAACTCTCAGATCTTCGTGATGAACAACTACTTTGGC ATTGGAATAGATGCGGACCTCTGCCTGGACTTCCACAATGCGCGTGAAGA GAATCCCAATCAGTTTAATTCGCGTCTGCGCAACAAGGGCTACTACGTCA AGATGGGACTGCGCAAGATCGTGGGTCGCAAGGCTGTCAAGGATCTGCAA AAGGAACTGCGCCTGGAGGTCGATGGCAAGATTGTCGAACTGCCGCCCGT CGATGGCATCATCATCTTGAACATTTTAAGCTGGGGCAGCGGTGCCAATC CCTGGGGTCCCGACAAGGACGACCAGTTCTCAACGCCCAACCATTACGAT GGAATGTTGGAGGTGGTCGGTGTTACGGGCGTGGTTCACTTGGGTCAAAT CCAATCCGGAATTCGTACGGCCATGCGCATAGCTCAGGGTGGTCACATCA AGATACACTTGAATACCGATATGCCCGTCCAGGTGGACGGTGAGCCCTGG ATTCAGAGTCCCGGCGATGTGGTCGTCCTAAAGTCGGCCCTCAAGGCCAC CATGTTGAAAAAGAACAAGCTGAAAATGAAACGCCGGAACACGGAACCCA CCATGATGGTGGCCGGCTCGGCCGCCCCCCCTCTGTCCCTGGCCCTACCG CCCAGCGTAGGCGAAGTGGGCGTGGCTGGGGAGGGCGCCGAGGGCGACGG CGGTACGAACAACACGGATTTCTGAATATGGTACAGCGAGCGTCTGATTT AACGTGCTAATTCCAGCGCAGAACCAAACTGCATCCCACACAGACCACAG ACCCACCCACCCGCGAAAAGCCCACCCGATCCCCCCACCCAATAGCAAAA GCAGCAGCAGAAGAAGCAAAAGGAGCAGGAGCAGAAGCTAAAGAAGAAGC CACTTACCATCTCAGCAGTCCATAGTCCAACACTGAACACCAAACACCAC AGAAACCAAAGAGCTGGCAACTCGAAAATCAAAAGCTGTAATCAAAATTA CTTGTATAAAGTGTCCAGTCCACAGTATTAGATCGGATTATATGACGATG ATCAGTTTAGCAGCTCAGCGAACCCGGCCGCCTTTCCACGGTCTGAAATC AGTACGTTAAACTCAAACAGCTCGAACCAACACTGTCCGCTCGCCATTTG CATTTCGTACAGTGTAGAAAGCAGCAAGATGCGCAGCGGGCAGACATGAA ACTAAGCCAACTCAAATGTTAAACAATAGAGGGTATTTATAGTAAAGGAA AGAGATTTAATTCAAAAGCACTCAGCAATAGTCTGGCCAAGTTGTATCAA ATTCAAGTTCAATTATGTTCCTTCTCGTTTTGTTCCTACGTAAGCGACAG CAGAAACCGATTAGTGATACCGTTAAACAGAAAGAAGCGCAAGCAGTAGT AAAAAATAAACAGGGAGAATGAAAAAGAAAACAAAAAGAAGGAGTAAAGC TAAAGCTAGAGAAACCCAAGAAAACAAAACAAAAAGTACAAAATTGTTGA AAATTGTTTGTTATAACTAAATGAAATCGCGTAAAACCAAGTAAGCACAC CCGAACTACGACAAACAAAGTGAAATCAAAGAAATAAAGCTATGTATTAC CAAGTAGGTAAATAATGTTGTGTTCCAGCGAACCCCAGTGTTCCGAAACC AACGTGAAAAGGTTAAAAAAAAAAACCCAGCCAGGTCAAGATACAAACGT ACAGCAGATGCGGGAAAATTTATATGAAACTTTTTTATGTTGTGGATCGA TTCGAAACGCGATATTGAAACTTTTGAGTGGGAAAAAAGCTGCAAATTGC ATAGTTGGCTAACTACTAATTGGGACGAATAAATTGGAACCCACAGGCGG GCCTAGCTCGTCCTGTGTGCCATTGAATTAAATGCGGAAAAACACCTTTG GATTGTGCAATTGGTATGAATTTTCTCCGCTGCTGTGCGTCCACCAAAAG AAAGAAGAAAGTGAAAAACCACGAGAAATAGGAAAATGCATTTTTCGAGC GTAGGCAATGGCATCGCAAGTATTTCACCTGCATTTGTCTAAAACAAGAA AC
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) CG31140-RB FBtr0084498 5330 CG31140-RD FBtr0113392 5721 CG31140-RE FBtr0113393 1811 CG31140-RF FBtr0300963 4144 CG31140-RG FBtr0305041 6647 CG31140-RH FBtr0330371 5721
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) CG31140-PA FBpp0083885 1564
Derived from OTHER transcripts	Name FlyBase ID Length (aa) CG31140-PB FBpp0083886 1055 CG31140-PD FBpp0112304 1555 CG31140-PE FBpp0112305 254 CG31140-PF FBpp0290185 1026 CG31140-PG FBpp0293578 1498 CG31140-PH FBpp0303397 1571
Comments
	Transcript terminates at site supported by polyadenylated cDNA.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_142942
Synonyms
	CG31140-RA
References ( 2 )
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]