Transcript Dmel\Ptr-RA

General Information
Symbol	Dmel\Ptr-RA	Species	D. melanogaster
Annotation Symbol	CG11212-RA	FlyBase ID	FBtr0086003
Feature type	mRNA	Associated gene	Dmel\Ptr

Evidence Rank	Strongly Supported	Length (nt)	4630
Evidence Score	11

Map ( GBrowse )
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 35 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent	RE45036
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	59976 65248 71360 97995 102806 104192 117550 156718 159764 214211.51 214341.51 CK01.66D.E12 CK01.90C.A8 EK053952 EK070436 EK086625 EK188508 EK192017 EK198952 EK224110 EK245313 EK259616 EK262527 EP03358 GH19449 RE06080 RE36766 RP001004040 RP001006933 RP001019416 RP001042590 RP001045842
End(s) extend beyond the annotated transcript, internally consistent	RP001021327 RP001032852
Sequence
	CTCAGTTCGTGATACGGTCTCAAAGTCAGCGGTTGCCGGTCGCTCCGCCA TCGCCATCGCCATCGCATCCGTTTCTTTTCTTTTCGATCCGTGCCCGCCA GGGGAAATAATTCGAAATACGATGGCCGAAGGCAGTGCAAACAGTGTGCA ATCTTTAATAAATCACTAAGAAATTCTGTGAAAGGGGAATCGGAATCACG CAGAGCCGAGTGCAATTGAAAGGCTCGCGTGTAAGTTGTAGGTCCATTGA AACGGTTGCAGAAGTCCACACACCATATACACCTGTAACACACCTGTCGC ACACAAATCTTGGATACAAAGTGAAGAAACTCTACACTCTACATTTCGGC GATACAAGATGACGTGTGGTATTTCATGTGTCGATAAGACACTGAATAAA TCGTTTTACCATCTGGGAATATGCATAGCCAAACATCCTGGATATTTTAT TATCATTCCTGTGCTGCTGACGCTGCTCTGCATGACTGGTTACCAGCAGC TGAAGTATCAAATTGATCCGGAGTATTTGTTCTCGCCAATTGCGGGGGAG GGAAAGACTGAGCGTGCCATCGTTGAGCAATACTTCAAAGTGAATTACAC GCACCGCTTTAACGTCGGACGCATAACGAGGCCCGGTCGCTTCGGGCGAG TCATTGTGATAACGAAGGATGGCGACGAAAATATGATCCGCCGCGAGGTT TTCCAGGAGCTGCGGCAGCTGGACAACATCATCCAAAATGCTACAACCAC TTATGATGGTGATACCTATACGTACAAGGACAATTGTGCCCGCTGGGAGA ACGAGTGCTTTGAGAACGATATTCTCAATTTGGATGCGCTGATGGATGAC ATTGAAGCGGGTCAACTGAATTTGACATTTCCTTTCATGTTTAATCCAGT CACGTGGGATGCCCACTTGTTTCCTGTCTTTTTTGGCGGCACCAAGCTGA CTGAGGACAATTATGTGATCAGTGTTCCGGCCATTCAGTTGGTGTATTTC GTCACCGCAGACACCAAAAGGCAGGATGCCAAGGGTGCCGAGTGGGAGGA GACTTTCCTGCGGGTGGTTGGCAACGCAGAGAATTCTGGACAGTTCAAGC ACATCTCGGTCTCATATTTCGCCTCCCGTACGTTGGACCACGAGCTCGAG AAGAACACAAAGACTGTGGTGCCCTATTTCAGCTCAACGTTTCTGCTGAT GGGTCTGTTTAGCATTATCACCTGCATGATGGGTGATGCAGTTCGCTCGA AACCCTTCCTGGGGCTCATGGGCAACGTTTCGGCCATTATGGCCACCCTG GCCGCTTTCGGCCTGGCTATGTACTGCGGCATTGAGTTCATTGGCATCAA TCTCGCTGCTCCCTTCCTGATGATCGGCATTGGCATCGACGACACTTTCG TAATGCTGGCAGGTTGGCGGCGCACCAAGGCCAAAATGCCGGTCGCGGAA CGAATGGGTCTTATGATGTCCGAGGCGGCGGTGTCGATCACCATCACCTC GGTCACCGACTTCATTTCGTTCCTGATCGGCATTATTAGCCCTTTTCGAT CGGTCAGGATCTTCTGCACGTACTCGGTGTTCGCCGTTTGCTTTACGTTC CTGTGGCACATCACCTTCTTCGCCGCCTGCATGGCCATTTCGGGATACAG GGAGCGGAAGAATTTGCATTCCATTTTCGGCTGCCGTGTCCAGCCAATGT CTGTTGCAATCAAAGAAAAGCGAAACTTCCTCTACAAAGCGATCATGGCT GGTGGCATAGACGCTAACGATCCTGACAATCCCATCGACAACAAGGACCA CATGCTGATGGCGTTCTTCAAGGACAAGATGGCTGCAGTAATCAACAACA AGTGGTGCAAGGCGATCATCATCCTGGCCTTTGCAAGCTATTTAGTTGGC GCCTGCTACGGAATCACCCAAATAAAGGAGGGTCTCGAACGACGAAAGCT CTCCCGGGAAGACTCCTACTCGGTGGAGTTCTTTGATCGCGAGGACGACT ACTACCGCGAGTTCCCATACAGAATGCAGGTAATTATTGCTGGCCCGTTA AACTACTCGGATCCTCTAGTCCAGGAGCAAGTGGAGAACCTTACCAGCAC CCTGGAGCATACCTCGTACGTAACCTCTAGGCGTTACACAGAGTCCTGGC TACGCTCGTTCCTCTCATTCTTGGAGCGCAACAATGAGCTCCTTAATGTT ACGGTGGACGATGAGCAAACATTTATTGACGCCGTGAAGGAGCACTGGTT GTTCCCTGGTAACCCCTTCTCCCTGGATGTTCGCTTCAATGAGGACGAAA CCCAAATTATTGCCTCACGGTTTCTCATTCAAGCGGTTAACATCACAGAT ACCAATCACGAAAAAGAGATGGTTCGGGATCTACGACAGATCTGCAAGGA CTCTCCGCTGAATGCCTCGATATTCCATCCATATTTTGTGTTCTTTGATC AGTTCGAACTGGTGAGACCGGTTTCACTCCAGGCAATGGTGATCGGAGCC ATCATAATGATGATCATCTCCTTTGTTTTTATCCCTAATATACTTTGCTC CTTGTGGGTGGCCTTCTCGGTCATCTCGATAGAGCTGGGCGTTGCAGGAT ATATGGCCTTGTGGGACGTTAACCTGGACTCCATTTCGATGATTAATTTG ATCATGTGTATTGGCTTCTCAGTGGACTTCACCGCTCACATCTGCTACAC ATACATGTCCTCGAAAAAACGCAGCCCCAAGGCACGAGTCCGAGAAGCGC TTCACTCCCTGGGTCTTCCAATTATCCAGGGCTCCAGCTCGACTATTCTG GGCATTGTTGCTCTTCTGCTGGCCCAGAGCTACATCTTCCTGGTCTTCTT CAAGATGGTGTTTTTGGTGATTTTCTTCGGCGCCATGCACGGACTTTTCC TGCTGCCTGTGTTACTCTCGCTCTTCGGACCCGGATCTTGCCTTACCTGG ACGGGAAAGGACGATGGTAGCGACGCAGAGGTAGACGACGGCCTGGACGA CCGTCAGCTGGAAAAGCCCTTTTCACAGTCATATTACATGCAATACCCTA GCATTGGTATCAACGGCCCATATGGCTCGAAAGGCTTCCTGGGAGCCCCA TACAAGGCCTACGGTGTGGACGAGAAGGATCTAGGACTGGGTACCTCTGG TGAGGACTCGTCGGAGAGCAGCTCAAGTCGATCGCAGCACCGGCAGCAGG CTGCCGCCACAGAGGAGGAGGTTGTGGTACGTGAGTCTCCGACGCGGAGA TACGATGACGGCTGGCGTCGCTCCTCCTACCAGAACATTTATGGTCAAGG AGCAGCACAGTTTCAGGCCCAACCCGATCTGTACGGCAAGCAGGTTTCGG CGACCGAGTGGCGCCAGCGTTTGGATACCCACGAGCAGCAGCAGCGTCAA AGGCAGCGGAGAAGTCCGTTTGAAAACTACCGCCAGGACGTAGAGATTGA CATGCAGAAGGCGCGACGTAACTCGCACGGCGACGTTATCGATCTGCATG GAACACCCAACTCCTCCGTGGAGGAGCGATTTAGACGACGGGGAGAGCCC TTCAGTGCGGAAAGTGGGGACGACAGCAGCTACCGTCATCAACAGATAAT GGCTATGCCAGCCGCTGGATCCGCTCCTTCAGCTAAGCGGTATCACCGAC GACGATCCTCAGAGGATTCCACCAGCCGACACCAGCGATGGCCGGCAAAC ATCGAGGAGCGGAGGGCACGACGCGCTTACTCGCCTGCCCACAACCGCCC AGAGACTGCCTTGACCAGCTACGCCTACCGCTCCTCCTCGCACCATAATC TTTACCAGCCGAACGGGAAGTCTTCGAAGTATCCGCCCACTTACCAGTAT GGCGACTACTACCATTGAGTGAAATATGCGAAAGTCCTCGTTGAAATGTG ACAGGAAAATTCCTTATATTTATAGAGTGTTCTGTGGGACAGCCTTTAAA CAAATTACTAGCAAAGTAAAGAGCATTACAAACCCTTTAAATGAATGATC AAAATCGGTATGGATTCTCAAGCTAAAAGTATTTCAATTACCCCGCTTAT CAGTCGATTTTATTATACGAACCAACAAGGTTGAAGTTTAAATGTCTTAT TTTGACAACTCAAAAATGTGTTAATATCGCCTGTAGAACATATAAAAAAG TTTTGATTGTTTAGTTTTTTGTACCTATTGCAATTAAAATCGAGTTAGAG AGGGACTTGACGAAACAGAGCAAACATTCTTGTCAACCATATTTAAGTTA GGCCTTTTGAACAAATCACAGCTATTTCAGTCACTTTTTTATACTTGCCC GCAATTTAATGACACAACACAAGCATTTCATCGATAAGAGCTCAGAGAAC TTAAAATACCAACAACACATTAACATACCTCTAGTTACATGTATGCTATT TGAGTCAGATTTTGGGATCCCCATTACAGTTTTCATTAAAAATAATTTAG ATTTAATAACATTTTGTATAGCAAAAGAAACCATAAGTAAATATTTAAAA ACTATTACCTGATAAGAATGGCCGCCGCATCAAGGACGGCTTGGCTACCT AGCGCTTATACGCATTTGGGACAAGTTTGTACAATTGTTTACACATTTTT CTATTTAATAAAAATTTTATATTTTCCTAG
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) Ptr-RB FBtr0307500 4885 Ptr-RC FBtr0307501 4941 Ptr-RD FBtr0336523 1385 Ptr-RE FBtr0336524 1650
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) Ptr-PA FBpp0085347 1169
Derived from OTHER transcripts	Name FlyBase ID Length (aa) Ptr-PB FBpp0298835 1169 Ptr-PC FBpp0298836 1169 Ptr-PD FBpp0307593 94 Ptr-PE FBpp0307594 94
Comments
	Transcript terminates at site supported by polyadenylated cDNA.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_136365
Synonyms
	CG11212-RA Ptr-RA
References ( 2 )
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]