FB2020_06, released Dec 22, 2020

Transcript: Dmel\Vha16-1-RB

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General Information
Symbol
Dmel\Vha16-1-RB
Species
D. melanogaster
Annotation Symbol
CG3161-RB
FlyBase ID
FBtr0086151
Feature type
mRNA
Associated gene
Dmel\Vha16-1
Evidence Rank
Length (nt)
2798
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 277 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      Sequence
      Sequence Downloader
      GCCACTCGCAATTCGTTCGTCGTCGCAGCAGCATTGGTCGCAGAGCAGCGTAAAACCCCACCCTAAAAAACACACAACAA
ACAAAGCAAAATGTCTTCTGAAGTGAGCAGCGACAACCCCATCTATGGCCCCTTCTTCGGAGTTATGGGAGCCGCCTCCG
CCATCATCTTCTCGGCCCTGGGCGCTGCTTATGGCACTGCTAAGTCTGGTACCGGTATTGCTGCCATGTCAGTGATGCGG
CCTGAACTGATCATGAAATCCATCATTCCTGTGGTCATGGCGGGTATCATTGCCATTTACGGTCTGGTGGTGGCTGTGCT
TATTGCCGGCGCGCTGGAAGAGCCATCAAAGTACTCACTATACAGGGGCTTCATTCACTTGGGAGCCGGTCTGGCGGTGG
GCTTCTCTGGTCTGGCAGCTGGTTTTGCGATCGGCATCGTGGGAGACGCCGGTGTCCGTGGCACAGCACAGCAGCCTAGA
CTGTTCGTGGGCATGATCCTGATTCTCATCTTCGCCGAAGTGTTGGGTCTCTACGGCTTGATTGTGGCCATTTACCTGTA
CACGAAATAAATCAATCAATGCAAACACACAACAACAACAGATAGACAAACGGCGCCCAGCGGTCAACAGCAGCCACATC
AACATCAGCAGCAGCTTCAAGAGGAGCAGGTAAAATTGTGTCAAGCCAATGAGCAACGTGCAACATGCAACTTCCAACAA
GCAAAAACCACAACAGTGCGTGTGCGGTGCAAGCCCGGCGTGGACCGTTTGTACATAGGGAGAACAACCAAAACCAGTCC
TGCCGGACTGCAGGATCTCCGCCACGCACTGCCCATTGGTGGCCGCCGATTTGCACCTGTTGTTCAGTTTACCTCGATTC
GCTGGCGCGTGGTTTAGCTTAGTTATTTTCCGTTCAAAATCAGTCTTAAACACGAGGAAAACAATTTGCAATTAAGTTCA
TAAAGATGTAATAATTATGATTTTTGCTATATCAAGAAATCCTGCTCTTTTACTTTTTATTTTGCGCTCCACAATTTTGT
GTGCTCTTTGTTATTTGTTTTTTCCATTATTATTATTAAATAATGTTTAGTGTATATGTAAAGTTCGTTAAACAAAAAGA
AAAAATTGTAAAGAAATCAACAACCAACAATTGTCAGAAGAAACTTTGTACATTTGCATTGAGCCTGACGCGGCTGCAAC
CAATTCAGATCAACAAATTTAGCGAAAGGGCCAAAACAACAAACAAACAAGCAGCAACCACAACATCAATGCTACCGCCC
GATGTCATCCGGTGCGGCAACGTACCGCTCTTGTCCGATTGCCGCTGTTTGGGCGCGCCCCGCCCCCTTCTTTGGTGGTG
GGGGTGGAAGCCCAGTACAGTGGTGCCTCTGGATTTCGGACGGCAAGCGGACGCTTGGCAATACTTTATCGTCAACTGCG
GAAACCAACTACATGCAATCATTCACACACACACACACAAAACCAACACACACACACACACATACAAAATGTAACTAAGT
CCTACGTTTATTTTTAATTATTGTTCAATTCTAAGAATAATATATTAAAAATTAATAATAATAAATTATATATATAATTA
TGATTTTTTGTGATAAGAACAGATGGTAATGCAAACAATTACGGTATTGATATACATAATATATACAGAATATATATATA
TATATAAACAAGAACAAGAAATCATAAACAATTATACATATTAACACGAGAAAGTTGTTATAAAACGTACGAAACAATAC
AAATCATGTGAATGAATGTAATGCGACAAACTAAAAAATACTGCAAATCAACAACCACAACACACACTTTTTCCGCTGTT
ATTGTATAGTAAAGAAAATATTATATATATAAATATATATTATGTATAAAATATTAACAAGAAATTGTAGTAGCAAAATT
ATAAACCAACAAACAAGAATACCCACAACAAAAGTCGTGCAAGCAGAACCCAAAAACCGTAGACGAATGTTGCAAATGAA
ACTCATACCAACAACAACCACATTAGCAACACGAAATCTACCAGAAAAATCCAACAAAAAAAATTGTAAAATCCCAACAA
ATTAGAAGTTATAAGAAGCTACTTCGGAACCGAACCCAACAACACCCGATCAACATGTATAGTAGTGGCATTAGGCAAAT
AACAATTAATTTGTAGGAGAGCCACGCAAGCCGAACGACCCGGTCCCGAGAAGGATGCACATTCCACCGCCCGTTGGACG
CCGATGCATTCGTGATGCTGAGAATGCGGAGGAGCTCAACCTGTGCGGAGGCGCTGAATTCCCGGGACCCGAATCGCTCT
GCTTGCGCACACCTCCCGATCCCCACAAGAAAGCGACCACAACAGAAATGCACAAAACACACCTGCAATAAACCACTTGT
GCTCACAATCAATCAGCAATTGTATATAAGCATGTGACGTTGCCTGTCAATCACAGATTCCCCCATCCGACACCGAATCA
TGATGCAGCGTCAGTGTTACGTTCCCATCGGAAAACGGTGGGGGAAACTAATTAACTCGATTGCTAGCTTAAGGAACTCA
CGAAGCAAGTGTTGAATAGTCCGTTTATTATTGTTACGCGTACCCCCAACAATTGTGTCACGAATTCATATTGTTATTTG
TTTAAGTTGCATGCACCCCACAACATAGACCTACCTATACATGTATCCAATGGTGCGGTTTTAGAAACTGTAACTGTGTA
TTCGAAACAACTTATAAAGCAAGTAAACAACCATCAACAACAGACATTGTATGAAATAAATTGTAATTTCTAATTTCC
      Other Products of this Gene
      Other Transcripts
      Name
      FlyBase ID
      Length (nt)
      Vha16-1-RA
      FBtr0086150
      2833
      Vha16-1-RC
      FBtr0086152
      2981
      Vha16-1-RD
      FBtr0086153
      2816
      Polypeptides
      Derived from THIS transcript
      Name
      FlyBase ID
      Length (aa)
      Vha16-1-PB
      FBpp0085484
      159
      Derived from OTHER transcripts
      Name
      FlyBase ID
      Length (aa)
      Vha16-1-PA
      FBpp0085483
      159
      Vha16-1-PC
      FBpp0085485
      159
      Vha16-1-PD
      FBpp0085486
      159
      Comments

      Transcript terminates at site supported by polyadenylated cDNA.

      External Crossreferences and Linkouts ( 1 )
      Crossreferences
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      Synonyms and Secondary IDs (3)
      Reported As
      Symbol Synonym
      CG3161-RB
      (FlyBase, 1996-)
      Vha16-1-RB
      Vha16-RB
      (FlyBase, 1996-)
      Secondary FlyBase IDs
        References (2)