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General Information
Symbol
Dmel\Vha16-1-RC
Species
D. melanogaster
Annotation Symbol
CG3161-RC
FlyBase ID
FBtr0086152
Feature type
Associated gene
Evidence Rank
Length (nt)
2981
Evidence Score
Genomic Location
cDNA Clones Consistent with the Transcript ( 241 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        GCCACTCGCAATTCGTTCGTCGTCGCAGCAGCATTGGTCGCAGAGCAGCGTAAAACCCCACGTATATAGCACATATATTG
        TACATATAATAAAAATACTTTGTTTCGACTTGAAGCAACGCATACATATAACGAGCGCGCATAACATTCAGATTCATCTG
        TGCAAAACGCCGAATAAAAACTATAGTGCAATCACCACAGCAGCAGCAAAACGAACTAAAATTTCGATTTCTCATCATTT
        GTAGCCTAAAAAACACACAACAAACAAAGCAAAATGTCTTCTGAAGTGAGCAGCGACAACCCCATCTATGGCCCCTTCTT
        CGGAGTTATGGGAGCCGCCTCCGCCATCATCTTCTCGGCCCTGGGCGCTGCTTATGGCACTGCTAAGTCTGGTACCGGTA
        TTGCTGCCATGTCAGTGATGCGGCCTGAACTGATCATGAAATCCATCATTCCTGTGGTCATGGCGGGTATCATTGCCATT
        TACGGTCTGGTGGTGGCTGTGCTTATTGCCGGCGCGCTGGAAGAGCCATCAAAGTACTCACTATACAGGGGCTTCATTCA
        CTTGGGAGCCGGTCTGGCGGTGGGCTTCTCTGGTCTGGCAGCTGGTTTTGCGATCGGCATCGTGGGAGACGCCGGTGTCC
        GTGGCACAGCACAGCAGCCTAGACTGTTCGTGGGCATGATCCTGATTCTCATCTTCGCCGAAGTGTTGGGTCTCTACGGC
        TTGATTGTGGCCATTTACCTGTACACGAAATAAATCAATCAATGCAAACACACAACAACAACAGATAGACAAACGGCGCC
        CAGCGGTCAACAGCAGCCACATCAACATCAGCAGCAGCTTCAAGAGGAGCAGGTAAAATTGTGTCAAGCCAATGAGCAAC
        GTGCAACATGCAACTTCCAACAAGCAAAAACCACAACAGTGCGTGTGCGGTGCAAGCCCGGCGTGGACCGTTTGTACATA
        GGGAGAACAACCAAAACCAGTCCTGCCGGACTGCAGGATCTCCGCCACGCACTGCCCATTGGTGGCCGCCGATTTGCACC
        TGTTGTTCAGTTTACCTCGATTCGCTGGCGCGTGGTTTAGCTTAGTTATTTTCCGTTCAAAATCAGTCTTAAACACGAGG
        AAAACAATTTGCAATTAAGTTCATAAAGATGTAATAATTATGATTTTTGCTATATCAAGAAATCCTGCTCTTTTACTTTT
        TATTTTGCGCTCCACAATTTTGTGTGCTCTTTGTTATTTGTTTTTTCCATTATTATTATTAAATAATGTTTAGTGTATAT
        GTAAAGTTCGTTAAACAAAAAGAAAAAATTGTAAAGAAATCAACAACCAACAATTGTCAGAAGAAACTTTGTACATTTGC
        ATTGAGCCTGACGCGGCTGCAACCAATTCAGATCAACAAATTTAGCGAAAGGGCCAAAACAACAAACAAACAAGCAGCAA
        CCACAACATCAATGCTACCGCCCGATGTCATCCGGTGCGGCAACGTACCGCTCTTGTCCGATTGCCGCTGTTTGGGCGCG
        CCCCGCCCCCTTCTTTGGTGGTGGGGGTGGAAGCCCAGTACAGTGGTGCCTCTGGATTTCGGACGGCAAGCGGACGCTTG
        GCAATACTTTATCGTCAACTGCGGAAACCAACTACATGCAATCATTCACACACACACACACAAAACCAACACACACACAC
        ACACATACAAAATGTAACTAAGTCCTACGTTTATTTTTAATTATTGTTCAATTCTAAGAATAATATATTAAAAATTAATA
        ATAATAAATTATATATATAATTATGATTTTTTGTGATAAGAACAGATGGTAATGCAAACAATTACGGTATTGATATACAT
        AATATATACAGAATATATATATATATATAAACAAGAACAAGAAATCATAAACAATTATACATATTAACACGAGAAAGTTG
        TTATAAAACGTACGAAACAATACAAATCATGTGAATGAATGTAATGCGACAAACTAAAAAATACTGCAAATCAACAACCA
        CAACACACACTTTTTCCGCTGTTATTGTATAGTAAAGAAAATATTATATATATAAATATATATTATGTATAAAATATTAA
        CAAGAAATTGTAGTAGCAAAATTATAAACCAACAAACAAGAATACCCACAACAAAAGTCGTGCAAGCAGAACCCAAAAAC
        CGTAGACGAATGTTGCAAATGAAACTCATACCAACAACAACCACATTAGCAACACGAAATCTACCAGAAAAATCCAACAA
        AAAAAATTGTAAAATCCCAACAAATTAGAAGTTATAAGAAGCTACTTCGGAACCGAACCCAACAACACCCGATCAACATG
        TATAGTAGTGGCATTAGGCAAATAACAATTAATTTGTAGGAGAGCCACGCAAGCCGAACGACCCGGTCCCGAGAAGGATG
        CACATTCCACCGCCCGTTGGACGCCGATGCATTCGTGATGCTGAGAATGCGGAGGAGCTCAACCTGTGCGGAGGCGCTGA
        ATTCCCGGGACCCGAATCGCTCTGCTTGCGCACACCTCCCGATCCCCACAAGAAAGCGACCACAACAGAAATGCACAAAA
        CACACCTGCAATAAACCACTTGTGCTCACAATCAATCAGCAATTGTATATAAGCATGTGACGTTGCCTGTCAATCACAGA
        TTCCCCCATCCGACACCGAATCATGATGCAGCGTCAGTGTTACGTTCCCATCGGAAAACGGTGGGGGAAACTAATTAACT
        CGATTGCTAGCTTAAGGAACTCACGAAGCAAGTGTTGAATAGTCCGTTTATTATTGTTACGCGTACCCCCAACAATTGTG
        TCACGAATTCATATTGTTATTTGTTTAAGTTGCATGCACCCCACAACATAGACCTACCTATACATGTATCCAATGGTGCG
        GTTTTAGAAACTGTAACTGTGTATTCGAAACAACTTATAAAGCAAGTAAACAACCATCAACAACAGACATTGTATGAAAT
        AAATTGTAATTTCTAATTTCC
        
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        FBtr0086150
        2833
        FBtr0086151
        2798
        FBtr0086153
        2816
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        FBpp0085485
        159
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        FBpp0085483
        159
        FBpp0085484
        159
        FBpp0085486
        159
        Comments

        Transcript terminates at site supported by polyadenylated cDNA.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (3)
        Reported As
        Symbol Synonym
        CG3161-RC
        Vha16-1-RC
        Vha16-RC
        Secondary FlyBase IDs
          References (2)