FB2020_06, released Dec 22, 2020

Transcript: Dmel\Vha16-1-RD

Open Close
General Information
Symbol
Dmel\Vha16-1-RD
Species
D. melanogaster
Annotation Symbol
CG3161-RD
FlyBase ID
FBtr0086153
Feature type
mRNA
Associated gene
Dmel\Vha16-1
Evidence Rank
Length (nt)
2816
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 230 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        GCCACTCGCAATTCGTTCGTCGTCGCAGCAGCATTGGTCGCAGAGCAGCGTAAAACCCCACGTATATAGCACATATATTC
CTAAAAAACACACAACAAACAAAGCAAAATGTCTTCTGAAGTGAGCAGCGACAACCCCATCTATGGCCCCTTCTTCGGAG
TTATGGGAGCCGCCTCCGCCATCATCTTCTCGGCCCTGGGCGCTGCTTATGGCACTGCTAAGTCTGGTACCGGTATTGCT
GCCATGTCAGTGATGCGGCCTGAACTGATCATGAAATCCATCATTCCTGTGGTCATGGCGGGTATCATTGCCATTTACGG
TCTGGTGGTGGCTGTGCTTATTGCCGGCGCGCTGGAAGAGCCATCAAAGTACTCACTATACAGGGGCTTCATTCACTTGG
GAGCCGGTCTGGCGGTGGGCTTCTCTGGTCTGGCAGCTGGTTTTGCGATCGGCATCGTGGGAGACGCCGGTGTCCGTGGC
ACAGCACAGCAGCCTAGACTGTTCGTGGGCATGATCCTGATTCTCATCTTCGCCGAAGTGTTGGGTCTCTACGGCTTGAT
TGTGGCCATTTACCTGTACACGAAATAAATCAATCAATGCAAACACACAACAACAACAGATAGACAAACGGCGCCCAGCG
GTCAACAGCAGCCACATCAACATCAGCAGCAGCTTCAAGAGGAGCAGGTAAAATTGTGTCAAGCCAATGAGCAACGTGCA
ACATGCAACTTCCAACAAGCAAAAACCACAACAGTGCGTGTGCGGTGCAAGCCCGGCGTGGACCGTTTGTACATAGGGAG
AACAACCAAAACCAGTCCTGCCGGACTGCAGGATCTCCGCCACGCACTGCCCATTGGTGGCCGCCGATTTGCACCTGTTG
TTCAGTTTACCTCGATTCGCTGGCGCGTGGTTTAGCTTAGTTATTTTCCGTTCAAAATCAGTCTTAAACACGAGGAAAAC
AATTTGCAATTAAGTTCATAAAGATGTAATAATTATGATTTTTGCTATATCAAGAAATCCTGCTCTTTTACTTTTTATTT
TGCGCTCCACAATTTTGTGTGCTCTTTGTTATTTGTTTTTTCCATTATTATTATTAAATAATGTTTAGTGTATATGTAAA
GTTCGTTAAACAAAAAGAAAAAATTGTAAAGAAATCAACAACCAACAATTGTCAGAAGAAACTTTGTACATTTGCATTGA
GCCTGACGCGGCTGCAACCAATTCAGATCAACAAATTTAGCGAAAGGGCCAAAACAACAAACAAACAAGCAGCAACCACA
ACATCAATGCTACCGCCCGATGTCATCCGGTGCGGCAACGTACCGCTCTTGTCCGATTGCCGCTGTTTGGGCGCGCCCCG
CCCCCTTCTTTGGTGGTGGGGGTGGAAGCCCAGTACAGTGGTGCCTCTGGATTTCGGACGGCAAGCGGACGCTTGGCAAT
ACTTTATCGTCAACTGCGGAAACCAACTACATGCAATCATTCACACACACACACACAAAACCAACACACACACACACACA
TACAAAATGTAACTAAGTCCTACGTTTATTTTTAATTATTGTTCAATTCTAAGAATAATATATTAAAAATTAATAATAAT
AAATTATATATATAATTATGATTTTTTGTGATAAGAACAGATGGTAATGCAAACAATTACGGTATTGATATACATAATAT
ATACAGAATATATATATATATATAAACAAGAACAAGAAATCATAAACAATTATACATATTAACACGAGAAAGTTGTTATA
AAACGTACGAAACAATACAAATCATGTGAATGAATGTAATGCGACAAACTAAAAAATACTGCAAATCAACAACCACAACA
CACACTTTTTCCGCTGTTATTGTATAGTAAAGAAAATATTATATATATAAATATATATTATGTATAAAATATTAACAAGA
AATTGTAGTAGCAAAATTATAAACCAACAAACAAGAATACCCACAACAAAAGTCGTGCAAGCAGAACCCAAAAACCGTAG
ACGAATGTTGCAAATGAAACTCATACCAACAACAACCACATTAGCAACACGAAATCTACCAGAAAAATCCAACAAAAAAA
ATTGTAAAATCCCAACAAATTAGAAGTTATAAGAAGCTACTTCGGAACCGAACCCAACAACACCCGATCAACATGTATAG
TAGTGGCATTAGGCAAATAACAATTAATTTGTAGGAGAGCCACGCAAGCCGAACGACCCGGTCCCGAGAAGGATGCACAT
TCCACCGCCCGTTGGACGCCGATGCATTCGTGATGCTGAGAATGCGGAGGAGCTCAACCTGTGCGGAGGCGCTGAATTCC
CGGGACCCGAATCGCTCTGCTTGCGCACACCTCCCGATCCCCACAAGAAAGCGACCACAACAGAAATGCACAAAACACAC
CTGCAATAAACCACTTGTGCTCACAATCAATCAGCAATTGTATATAAGCATGTGACGTTGCCTGTCAATCACAGATTCCC
CCATCCGACACCGAATCATGATGCAGCGTCAGTGTTACGTTCCCATCGGAAAACGGTGGGGGAAACTAATTAACTCGATT
GCTAGCTTAAGGAACTCACGAAGCAAGTGTTGAATAGTCCGTTTATTATTGTTACGCGTACCCCCAACAATTGTGTCACG
AATTCATATTGTTATTTGTTTAAGTTGCATGCACCCCACAACATAGACCTACCTATACATGTATCCAATGGTGCGGTTTT
AGAAACTGTAACTGTGTATTCGAAACAACTTATAAAGCAAGTAAACAACCATCAACAACAGACATTGTATGAAATAAATT
GTAATTTCTAATTTCC
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        Vha16-1-RA
        FBtr0086150
        2833
        Vha16-1-RB
        FBtr0086151
        2798
        Vha16-1-RC
        FBtr0086152
        2981
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        Vha16-1-PD
        FBpp0085486
        159
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        Vha16-1-PA
        FBpp0085483
        159
        Vha16-1-PB
        FBpp0085484
        159
        Vha16-1-PC
        FBpp0085485
        159
        Comments

        Transcript terminates at site supported by polyadenylated cDNA.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (3)
        Reported As
        Symbol Synonym
        CG3161-RD
        (FlyBase, 1996-)
        Vha16-1-RD
        Vha16-RD
        (FlyBase, 1996-)
        Secondary FlyBase IDs
          References (2)