A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Transcript Dmel\CG8920-RB

General Information
Symbol Dmel\CG8920-RB Species D. melanogaster
Annotation Symbol CG8920-RB FlyBase ID FBtr0086280
Feature type mRNA Associated gene Dmel\CG8920
Evidence Rank Strongly Supported Length (nt) 4005
Evidence Score 15
Map ( GBrowse ) GBrowse View Help detailed view FBtr0086282 FBtr0301207 FBtr0086280 FBtr0086281 FBtr0309253 FBtr0086297 FBtr0086284 FBtr0086285 FBtr0086283
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide cDNA Clones Consistent with the Transcript ( 37 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the
annotated transcript,
internally consistent
End(s) extend beyond
the annotated transcript,
internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the
annotated transcript,
internally consistent
End(s) extend beyond
the annotated transcript,
internally consistent
hide Sequence
TCAAGCGAGAATGAACTCCCGTATTGTTGTGTTAAAAGGAACTTCGTTCG
GGATCATCGGAATATTCATTTCTCAGGAAAACCCCAATAGTCTCATTTAT
GCAGTTTGCAGTGCATATCTTGCTGAGACTCGATTTTTATTAATTGTTTA
ATAGTTTGAATCGTGGAACGATCATAATGGAAAAGCAGGAGGTCCTGGAA
TACGTGGCCAAGGTGGTCAGGGCCCTAATCACGTCAGCTAAGCCGCCGGT
TACGCTGCGGTCCATCGTCGCAGATTACATGGAGATTGAGGGTGAGCCGA
TACCCTTTCGCAGGCTGGGCTACTCGAATGACCAAGAGCTGCTTAAGGAT
TCGAATCAATTCAACTTTCACCAAAGCGGTAATCAGGTGTTCATCACAGC
GAAGTATAACGCTAACACAGAACATATTGTGCGTATGGTACGTCAGCAGA
AGACCAGCAAGTCCACAAGCTTATCGAAGCCCACTCCAATTGCCCAGAAG
CCCAAGCCAATTGCCCAGAAGCACACTCACGGCAATAAGTACCACTACCA
GCAACGGAATAAGCAGCCGAATCATCAGCCGGATCAAGAAATAGGAAGAG
CAGCTAAGTGTGAGAATCAGGCTATAGCCGAGCATAAACAAGATCTAACG
GGCATCATAACCCAAGAGCTGTTTGAAAGTTTCAATAATATTCAAGGTCC
GTTTTCGGAAAACCTGCAGGTTTTCAACAAAAATCCAGAATATATCACAA
GGCGAAAGAAAGAGCTTAAGAAAGAAGACGATCTAGATCGTGGTCAAATA
ACGAAGGAAGTCGCTAGGGAAAAACAGAAGGAAAAAGAAACCCGCGATCG
GGCTGTGACGGAAACGATCTTCGTAACAATTGAGAACAAAAAGGCACCAG
TCATGAATGGACATGGACCAAGGCACGTTAAAGTGGCTAACGGACAAGAC
AAACACAATGACGGCAAACCTCCGCTGCGTGCCATACTGGGCAACAGTGC
TTCGCAGCGCCAGCAAGATACAAGCACCGTCTATCACAGCCCTGAATCCT
CATTCAAGCGGCCACGTCATCCGCGAGTAATGTACCCTGGTCACCAGCGC
ACCACGGGCGTCTCTGTGAATCACAGATTGAAAGTAACGCCGCAATCGGA
TGCACCCACGCCAGCGGTAGCGCCCATCACGCCGCCAGCTTCGCCGGAAT
ACGCTCAAACGACAACCGCCGCTAAAGCGACGTACAAAGAAGATATCCAC
GGAGGTCAAGGTGAAACAGGCAATGTCGTTACAAATCCAAAAGTTAAGGT
GCCACTTAAATTCGATCCCTCACTTGATCCCGTCTCCACGCTCAACTTCT
ATTGCGCGGCAAATGACTTTGAGAAACCTGCATACAACATATTCAACAAG
CTACGGAACCTACATTGTTCAGTGCAAATCGCTGGCGATGTTTACAGTAG
CTATCCGCAGGAGTTCACCGATAAGGAGACAGCATACCAACGCACAGCAC
AGATCGCCATCCAGCGCATCATGCATGCCCAGTCACACCAAAAGCTTTCT
GCTTGCACATTTAGCGATGTGGAGTTTATCGATGGATTGTACAAGGAGCT
GTTAAAGCACCCACATGGCATATTGGGTCACAAGCTGGAGGATTGGTACG
GCAGCACCTTCCGGCAACATCTGCCCAGTCATTGGTACGATTTGATCGTG
AAGTCAAATAAAATTCGTGTTGAGCACGGCATTGATCCAAGGATCATATT
GTTTGCCAACGATCCTGGTTCATCGGAGCCGGACCGCACCAGCATAACCA
CCCTGCCACAGATGGTGCTGCCGTGGCAGTCAAGCGAAGGAGGATCGCAC
GACTGGAACATGTTCATCAGCTTCTGCGACTCCACCAAGATAGTGTGGGC
TCGGATGATCGATCAGATCGCAAACTTTGAGGAACTGACGAAGCATATTG
GACGCCAAATGGAGTCTCCGCATTTCCGACAAAAGGTCTCTAAACCTTAC
GCTCAGGAAGTCTATTTAGTGGAGATGCCCGATGGCTGGAATCGTGTTCG
TGCAATTTCTGTGGATGAGGAGACCCGCTCGGGCCGTTATCACTTTATCG
ACTTTGGCGATGTGGCAATGTTTCATTCAGAAGATCTCTTCCACTGTCCA
CCGCAGTTCTTGGCGCTCCCGGCCCAGGCCGTGTGCCTCAGCATGTATGC
GTTGGATAAGTTCGAGGATCATCCGCACGCTCTGCAGGTTTTAACAAAGG
AGCTGGACGGCCAGACGGTTGTGGCCCATGTGCTCACCACGGAGAAGCAG
TTCCTGGAACTGGGTGGATCTGCCCAGGGTGTGGTGGAGAACGGTAAGCG
TCGGGCGTGCTTGGTGGCCACGCTGTACGACACCTCAACGGCTGAGGACA
TTCATCTGAACGATCTGGTTGCGAAAAGAATAACGAAGTGCACGCCGGCA
CCATCGCTGAGTGATGAAAAGAAGATCGGCAAGACCACGCCCATTCTTGT
GTCTCACATCAACGATGATGGTGATCTAATGGTGCTGCTACGCAATGATG
ACCTTAAGTTTGTGGAGCGCAGTATTGCGCAAACTGTGGCTGATTTGGGC
GAGCAGGACCGAGTGAGCTATTCGGATCTGCTCCACGACCGCCATATATT
CGTGTGCGACGAGACTGTCGATGGCGTCAAGCAGTGGTTCCGCGGGCGAC
TGGTCACCAGACCACTGAATCCGGACGAAGAGTCCTTCGATGTCTACTAC
GTGGACGATGGACGGCAGCGTAAGGCGCACATCTCTAATATCTACCGCCT
GGAGGCAAACAACAGAGCTCTGGCTACGTTCCCGCCACAGGCGATACCCG
TTCGCCTGCACGACGTTCCAGAGATCGGAGGTCATATGCTTCATCGCCTG
CGTGGTCTGATACCTTGGCGCACCGAAGCTCTCCTGAAGGTTGTGGCCAT
GGATGGTGGTAAGCCTCTGGTAAACGTATTCATCCGCGAGGATCCGGAGT
CCATGTATATGTGCGTGAACATTGGCCTTCGCCTGGAGCTCGAGATGGCT
AGCTCCATTCATCCGGAGAAGTATGATCATACGCTCCTGAGCTCCAATGT
CCAGCTGCCCAGACGCGGTAGCTTCAGCTCCGTGTTCTCGAATCAGAGCA
GCAGCAGCGACCTTGTCGCTACCACTCCCCCGGTGACGCCAGAGAAGAAA
CCATCCGCAAGATCGACCGGCAGCACCTTTTCGTCTCTCATGCTCAAGGA
TTACGAGGCTATTCCGGCAGTGGGTGCCTATTTCGAGGTGCGCGTTGCCC
TCTCCGTCAATCCCGGTCACTTTGCGGTGCAACCGTACAAATACTATAAC
CAGCTGCAGACTTTGATGAAGAATTTACAAGAGCATTGCCAAAAGACGGC
AGCCAAGGGAGTGCAGCCTTCACAACTGGCCATTGGAGAGGCCTACGCTG
CCCCTGACTCCGAAGGCGTATATCATCGCGTAAGTATTCACAAGATTTAC
GATGAGATTATACACGTGCGTTTCGTCGACGTGGGCGACGATGGAGTAAT
TGCCTGTGATCAACTGAAAACTCTAAATCCGGAGTTAAGAAAGCTGCCCA
AGATGGCATTGCCAGCACAACTTTATGGCATACAACTGACTGATGTAGTA
TGGAGCAAGGAGAACTGCGTCCGATTCCGGGAACTGTCGCTGGGTCAGAA
GTTTATTGGCATTGTGCGGCGAATGACTAAACAAAAGGATGGCGGACGAG
CGCTGTGCCTGGAGCTGGTGGACACCTCCACGCCGAAAGATATTAAGCTG
CACGAGATTCTCATCAATGAGAAGCACGCACAGCCAGCAACATAAGAAGT
CTGAGTCGGAGGAGACGATCCATTTAAATTTGTTCATGTTTATGTTTGCG
TAATCCTAGTTTTAGAATTAGGAATATACATATAACTTATTACGACGAAA
CATTCCGCCAGATGGAACCGATAATAGCTAATAAACTGATGTTTTTTATC
GAGAG
hide Other Products of this Gene
Other Transcripts
Name
FlyBase ID
Length (nt)
FBtr0086281
3079
FBtr0301207
3272
FBtr0309253
3753
 
Polypeptides
Derived from
THIS transcript
Name
FlyBase ID
Length (aa)
FBpp0085592
1222
 
Derived from
OTHER transcripts
Name
FlyBase ID
Length (aa)
FBpp0085593
879
FBpp0290425
965
FBpp0301192
1136
 
hide Comments
  • GC splice donor site postulated.
  • Transcript terminates at site supported by polyadenylated cDNA.
hide External Crossreferences
RefSeq - An integrated, non-redundant set of sequences
hide Synonyms
CG8920-RB
 
hide References ( 2 )
FlyBase analysis
FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome.
Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453]
FlyBase, 1996-, FlyBase inference based on genome sequence analysis.
FlyBase inference based on genome sequence analysis. [FBrf0104946]