Transcript Dmel\Dp1-RF

General Information
Symbol	Dmel\Dp1-RF	Species	D. melanogaster
Annotation Symbol	CG5170-RF	FlyBase ID	FBtr0086680
Feature type	mRNA	Associated gene	Dmel\Dp1

Evidence Rank	Strongly Supported	Length (nt)	5348
Evidence Score	15

Map ( GBrowse )
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 248 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent	LD21383 LD29992
End(s) extend beyond the annotated transcript, internally consistent	LD21677
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	5266 9758 31778 34172 43907 54319 57166 58539 60344 67211 70740 74194 75556 76016 76186 76244 78074 78477 80646 82005 99177 102747 103643 108105 123153 144371 155697 165334 173518 176455 176711 178499 214503.59 214509.31 214577.40 273694 CK01.7B.C7 CK01.59C.C3 CK01.60C.H8 CK01.69A.D6 CK01.76C.G1 CK01.90C.F10 CK01.102C.A10 CK01.130A.F9 Dmel_dig_012214_0717_0501 Dmel_neb_010247_0180_2675 Dmel_neb_013659_0145_1510 Dmel_neb_014216_0195_0422 Dmel_neb_014638_0842_2503 Dmel_neb_016137_0884_1736 EC054174 EK048210 EK048864 EK055247 EK059819 EK063664 EK071055 EK086235 EK100421 EK109134 EK113705 EK123944 EK147422 EK148810 EK149101 EK159224 EK170904 EK177206 EK177316 EK179419 EK181214 EK184654 EK207461 EK213039 EK213519 EK221610 EK242606 EK248204 EK250315 EK259239 EK269911 EK272827 EK277628 EK281558 EK282464 EK283730 EP14517 FGH102C03 FGH109G10 FGM227G12 FGM318F02 FGM319B10 GH23429 GH23430 GM07567 LD01002 LD02295 LD03549 LD03991 LD07657 LD08928 LD09635 LD09750 LD11494 LD16329 LD17607 LD20476 LD20951 LD25108 LD28860 LD31215 LD32150 LD34431 LD37661 LD38526 LD39816 LD40541 LD41594 LD41618 LD44441 LD44539 LP03893 LP06354 LP07709 LP11249 LP11525 LP15194 RE10015 RH02358 RH02569 RH04209 RH51751 SD03044 SD04447 SD04483 SD04726 SD06989 SD07979 SD09252 SD10536 SD10795 SD13866 SD22007 SD22305 SD22662 SD23324 SD24820
End(s) extend beyond the annotated transcript, internally consistent	38953 57843 62588 62913 121277 121302 156103 CK01.127D.H6 EK098548 EK156136 EK187836 EK188646 EK251359 EK259021 EN10202 GH13108 GH13474 GH18845 IP13406 IP13506 LD03802 LD14960 LD42787 LD47335 LP16108 RE08229 RE08470 RE10342 RE13278 RE15024 RE18340 RE19707 RE34542 RE39104 RE40610 RE41453 RE46484 RE53296 RE57692 RE57707 RE67671 RH47434 RH50356 RH52025 RP004070377 RP004089494 RP004092399 RP004102474 RP004109322 RP004121160 RP004141505 RP004141793 RP004172169 RP004178894 RP004187008 RP004187761 RP004194885 RP004197468 RP004200459 RP004200469 RP004200742 RP004206416 RP004216789 RP004218753 RP004236747 RP004240021 RP004249773 RP004253558 RP004256583 RP004259092 RP004264358 RP004265731 RP004270186 RP004307132 RP004402104 RP004410624 RP004457103 RP004487056 RP004530508 RP004532261 SD01804 SD02137 SD02236 SD04423 SD05254 SD05466 SD07062 SD07260 SD07505 SD08639 SD09856 SD10430 SD10627 SD20908 SD22554 SD23513 SD25359 SD27933
Sequence
	GACACCCAAGTTATCAAACTGGATTTGGTCAAAGGAGAGTAAACTCGGCC GGATTTTTTGGATTTTACAGTACCTGTACTGTAAACGACTTGGAACGAAA AAGGACTTTTCTCTTTTTTTAAGTAATGCAAGCAGCAGCAGTGATGGAGG AAACTAACAACGCAACTACCATCGAGCAGCAGCCCATCGCTCTCATTAAT GGCCAAGAGCAGGTGGCCAACGAGCAGCAACCATCCTCGCCAACTTCAGT GGCCACGCCCACTAGTACCACTAGCGGCGGAACTGGCAATGCCACACCCG CCTTTAGCTACGACGACCTGTTTCCGGCCCTGCCGGCCAACACTTCGGCT CAATCGCAATCCGGAGCTTCCGGTTCGACTCTAGCTCGTGTGACGAGTTC CCAAAAAACTCATATTGTGCATGTTCCCTGCAAGGAGCGCAAGTCCACGG AGTCGGAGAAGTTTGGCGAAGGCGAGTCGAAGCGTATTTGCCAGCAGATC ACCAAGGAGACCGGAGCCCAGATCGAGATTGTGAGCGGCAAGAACCAGTC GCTGACCTTCCTGATTAAGGGCAAGCAGAGCGAGCTGCTCGATGCCCGCC GTAAGATTCTTATGGGCTTCTCCACTCAGGCCAGTCGGCAGGTGACCGTT CCTCGGGAGCACTTCCGCGTCATCCTCGGCAAGGGTGGCCAACGGCTGCG CGAAATCGAGCGTGTTACTGCGACGCGCATCAACATCCCCAGCCAGAGCG ATGAGAGCGAGTTTATCACGATTGCCGGAACCAAGGAGGGTATTGCCCAG GCCGAGCAGGAGATCCGTCAGCTGTCAGCCGAGCAGTACAAGAAGTCATC GGACCGCATCACGGTGCCCAAAGTTTACCATCCCTTCATCGTGGGCCCCT ACAGCGAGAACCTAAATAAGCTGCAGGAGGAGACCGGCGCTAGGATCAAC GTGCCGCCGCAGCAGGTTCAGAAGGACGAGATCGTCATCTCGGGCGAGAA GGACGCGGTCGCAGCGGCAAAGGCCAAGGTGGAGGCCATTTACAAGGATA TGGAAAAGAAGTGCTCTACCGTCAGTGTGGAGGTAGCTAAGCCCAAGCAC CGATATGTCATTGGTCCGAAGGGCTCCACCATCGCCGAGATTCTGCAGTT GACCGGTGTGTCTGTAGAGATGCCTCCCAATGACTCCCCCTCGGAGACGA TCACTTTGCGTGGGCCGCAAGTGGCTTTGGGAAATGCCCTAACCGTTGTC TACCAAAAGTCCAACTCGGTCAAGTCTGTGGAGATCAATGCGGCACATTG GATCCACAAGTATGTGATCGGTCGCAAGGGGGCCAACATGAAGCAGCTGG AGGAGGACTGCCCCAACGTGAACGTGAATTGCCTGGAAGACAAGATCAAG CTGGAGGGAGATCCCGAGAACGTTGACAGGGCTGTAGCCTACTTGTCCGA AATCATCAAAAACTACGAGGAGAACTTCACATTCGAGGTGATGACGGTTA ATCCTTCGTACTACAAGCACATCATCGGTAAGGCTGGAGCCAACGTAAAT CGCCTGAAGGATGAACTGAAGGTTAACATTAACATCGAAGAGCGCGAGGG CCAGAACAACATCCGTATCGAGGGTCCCAAGGAGGGAGTACGGCAGGCGC AGCTTGAATTACAAGAAAAAATCGACAAACTGGAAAACGAAAAATCGAAG GATGTGATCATCGACCGCCGTCTCCATCGTTCTATTATCGGAGCTAAGGG CGAGAAGATTCGCGAGGTGAAGGACCGCTACCGCCAGGTTACAATCACGA TACCTACGCCCCAGGAGAATACCGATATTGTGAAGCTGCGCGGACCCAAG GAGGATGTGGACAAGTGTCACAAGGATCTGCTTAAGCTGGTCAAGGAGAT TCAGGAATCGTCGCACATTATCGAGGTGCCCATCTTTAAGCAGTTCCACA AGTTCGTTATTGGCAAGGGCGGCGCTAACATCAAAAAGATCCGCGATGAG ACCCAGACTAAAATTGATCTGCCTGCCGAGGGTGACACCAACGAAGTGAT CGTAATCACCGGCAAGAAGGAGAACGTGCTCGAGGCGAAGGAACGTATCC AAAAGATTCAAAACGAGCTTTCCGACATTGTCACCGAGGAGGTGCAAATC CCGCCCAAGTACTACAACTCAATCATCGGCACTGGCGGCAAACTCATCTC CTCGATCATGGAGGAATGCGGTGGTGTTTCTATCAAGTTCCCCAACAGCG ACTCCAAGAGCGATAAGGTCACTATTCGCGGTCCCAAGGACGATGTGGAG AAGGCTAAGGTTCAGCTATTGGAGCTGGCCAACGAACGGCAGCTGGCTTC CTTTACCGCCGAGGTGCGCGCCAAGCAGCAACACCACAAGTTCCTGATCG GCAAGAATGGCGCTTCTATCCGTAAGATTCGCGATGCCACTGGTGCCCGC ATTATCTTCCCTTCAAACGAGGACACTGACAAGGAAGTGATCACCATCAT TGGCAAGGAAGAAAGCGTAAAGAAGGCCCGTGAGCAGCTGGAGGCGATCA TCAAGGAGTGCGACGAAGTAACCGAAGGTGAGGTTTCTGTCGATCCCAAG CACCACAAGCACTTCGTGGCCAAGCGTGGCTTCATCCTGCACCGCATTTC GGAGGAGTGCGGCGGCGTGATGATCTCCTTCCCCCGTGTCGGCATCAACT CCGATAAGGTGACGATCAAGGGTGCCAAGGACTGCATTGAAGCGGCCCGC CAGCGCATCGAGGAGATCGTCGCCGATCTGGAAGCGCAGACCACCATCGA GGTGGTGATTCCACAGCGTCATCATCGCACCATCATGGGCGCACGTGGAT TTAAGGTTCAACAAGTCACCTTTGAGTTCGATGTGCAGATCAAGTTCCCT GATCGTGATGCCACCGAACCCGTCGAGGGTCTGACCAACGGAGGCAGCGG AGAGAATGGAGGCGAGAATGAAGGCCAGGAGGGAGAGCAGGAAGTAGAGA AGGAAGCCGAACAGGAGCCGGTTCGTCAGTGCGATGTTATCCGAATCACG GGCAGAATTGAGAAGTGCGAGGCCGCCAAACAGGCTCTGCTTGATCTTAT CCCCATCGAGGAGGAGTTGTCGGTGCCTTTCGACCTCCATCGTACCATCA TCGGACCGCGCGGTGCCAATGTGCGTCAGTTTATGTCCAAGCACGATGTG CACGTAGAGCTGCCACCTAGTGAGCTTAAGTCGGATGTGATCAAGGTCTG CGGTACGCCCGCTCGCGTCGCCGAGGCCCGCGAAGCGCTGGTGAAAATGA TTGAGGATTACGAGGCTGATAGGGCCGATCGTGAGCTGCGCTCCTTTGTT CTCCAGGTGGACGTAGATACGGAATTCCATTCGAAGCTCATTGGTCGTCA TGGCGCTGTGATTAACAAGCTGCGTGCCGATCACGACGTCATCATTTCGC TGCCTAAGCGGGATGAACCCAATGACCGCATCATCTCTATCACCGGCTAC CAGGCCAATGCGGAGGCAGCCCGCGATGCCATCCTAGAGATTGTTGGCGA CCCCGAGACACTTCATCGCGAGGTTATCGAGATCGATAAACGCATCCACC CCCACCTCATTGGCCAACGCCGACGCACCATTCGCAAGATCATCGAGGAT AATAAGGTGAACATCAAGTTCTCAGCTGATGATGACAACCCCAATTCGAT CTTCATCAGTGGCAAGATAGAGGACGTTGAGAACGTCAAGGAGTTGCTCT TCGGCATGGCTGAGGACTACGAGCGTGACTACTTGGATAACGTGGCGATA GCGCCGCCAACGATTGGTGCCTTCCTAACTGGTCAGGGTTCTGGATCCGA TGCCGCAGGTGCCAGCGAGAACGGATTCGTCATCAAAGACGCACCGTGGG AGAAGCAAAAGCAGGCCAAAAACCTGACTGCGCCCAACACTCAGTCGCAG GAGGACTTCCCGCACTTCGCTGCTGGCGGGGCTCCGGTGGCCTCCACGCC TATCACCTCCGTGTGGGGCCCCAAAAACTAAGTGCATCGGGCCGAGTGTC CCGATCGCCAGCAGTAGCAGCAATACTACAAGTCGGGGTGCGCCGGGGAT CGGAGCTGGAGATGGACCAGGAGCTGGAGCAGAAGCTGGAACTGGAACTT GAATTGGATTATCGGGCAATGAGCGGCAGAGCAGCGGCAGTCGTGCGGAC ATCTCTTTAGTCGAAAACTAGTGTCAAAAATAATGGTATAGGTTGTCTCC CAGGAGCTTTTCTACAACGCAATTTGTGCAGGTTAATAGAAAACGACTAT TTTTGTATGATTTGATACAGGATCAATCAAACACACAAAAACCCACACTC ACACACAACGGCACATACACATGCTCACACATATGAAATTGCATTTATAC AACATATAGAATACGAGAATCGAAACAGACAATTGACCACGCCTTCAGTT CCGTTCCCCGATGTGTTGGCCAAACCCCGGCCACTTTATATATAAAAAAC ACTTAATTGCCAATTTCTTTTTATATAACCATTCTTCATTGCAACACATA ATATTCTAATTAGTTGAAGCTCCCTAAAAGTAAGCAGAAAGTTCAGCAAA ATGGTTTGTTAATTGAATTAAAACTGACTAGCGAAGCACGTTCAAGAACG AATGTAATTTTAAGCATAAAATGTTAATTATTTACATTTACCTTCTATCT ACCCCCCGTTTTGATTACACCATACTCAATTTTCGTATTCGGAATTTCCA TTTAAACCCTTCCCAATTAAGTGATGATTATTATGATTTATGCGAAAGTA AATGTTAAATGAACGTTGATTGTATTGTACAAACGTTTCTTACGTTGCGG GGCGAGAGTGGAAGTGGAGATGGCGATTTATTTGAACAGCAAATATAAAC CTTACCTAAATTTAATAACTATATTACCCGCACGCCTGCTCCTACTCCTA CTCCCTAATCCTCTAGCGTTCTACCATACACACAGCCATGATACAGAACC CGAAAAACACACACACACACACACCGACTCTGTTCACATTTCAAAATGAG TATCGACATTTTAATTTTGTGCAATCCCCTTGATTTATATTAAATTGTTT TCGACTTATATTTTCCACTTAAATAATTTTCTTTGCGCCGCGGTGTAAAT TGTCAAAAGCAAGTAAAAGATTTGGAACTCTTCCAGTACTTTGTACGAGT ATCGGGTGATGGTTTTTCAGTTTTCTCAACTCTACACCGCGCAATATCTG ACAGTTGAAACACAAAGTATAAGAAAAATTATTAATTTTTTACTATTACT ATTCAATAAAAACAAAAAACCATATAAAACCAATAAAAATCGTAAACG
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) Dp1-RA FBtr0086682 5377 Dp1-RB FBtr0086683 5762 Dp1-RD FBtr0086679 5424 Dp1-RE FBtr0086681 5453 Dp1-RG FBtr0340329 5313
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) Dp1-PF FBpp0085861 1301
Derived from OTHER transcripts	Name FlyBase ID Length (aa) Dp1-PA FBpp0089201 1301 Dp1-PB FBpp0089202 1301 Dp1-PD FBpp0085860 1301 Dp1-PE FBpp0085862 1301 Dp1-PG FBpp0309290 1301
Comments
	Transcript terminates at site supported by polyadenylated cDNA.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_166282
Synonyms
	CG5170-RF Dp1-RF
References ( 2 )
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]