A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Transcript Dmel\Atg7-RB

General Information
Symbol Dmel\Atg7-RB Species D. melanogaster
Annotation Symbol CG5489-RB FlyBase ID FBtr0086711
Feature type mRNA Associated gene Dmel\Atg7
Evidence Rank Weakly Supported Length (nt) 1873
Evidence Score 3
Map ( GBrowse ) GBrowse View Help detailed view FBtr0307347 FBtr0086708 FBtr0086711 FBtr0086712 FBtr0086709
hide Recent Updates
Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
Update Feed
Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide cDNA Clones Consistent with the Transcript ( 3 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the
annotated transcript,
internally consistent
End(s) extend beyond
the annotated transcript,
internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the
annotated transcript,
internally consistent
End(s) extend beyond
the annotated transcript,
internally consistent
hide Sequence
CTCATTGGTCTATCGCCATCGAGAGCTTTGTTTGTTTATAATTTGCAGCC
AAACGTTTGAACGTAAACAACGCCCTAAGCAAAACATGAGCACGGAAAAA
GAGATAATTTTGCAATTTGCTCCGTGGGAATCTTTTGTGTCGCCCACTTT
CTGGCACAAGCTAGCGGAGCTTAAGCTCGACCACGATCGCCTGTCCGACT
CGAAACGCTCCATTACTGGACACTACACAAATCGTAATGCAAGTGGATGC
CTTTTGGAAGTAGACTACACGGCCTACAACAGTCCCTCTTTTGTTGGAAA
ACCATTGAAGTTTCTTGGCCTGCGACACAATCAACAAATGAACATCGATG
ACAGCCTTGTATGGAAGGTGATTCAGACTGAAGCTTGCGATCTTAGCCAA
AGCGAAAATATAAAGTTCGTGGGCTGGGAGCTAAATAAAAATGGCAAAAT
GGGGCCAAGAATGGTGTGCATGAGGGACAGCATGGATCCAGCCAAACTCG
CTGAGAACTCTGTAAACCTGAACCTGAAACTAATGAAGTGGCGCCTTGTT
CCCGATCTCAATCTCGAAATCATCTCCCAAACAAAATGCCTGCTCTTTGG
AGCTGGTACTTTAGGATGCGCTGTAGCTAGAAATCTGCTGTCCTGGGGAT
TTAAGCACATAACCCTTTTGGACAGCGGCAAGGTTGGGTTCTCTAATCCA
GTGCGTCAGAATCTCTACACGCATGCAGATGCTGTGGCAGGCAATCGGAT
GAAGGCGACTACAGCTGCTCAGAGATTGAAAGAGATCAATCCGTCTGCGG
AAACGGCGGGTTATGTGCTGGAGATTCCCATGCCTGGGCATACTATTGGA
GAATCGCTTCTAGCCCAGACGAAGGAGCATTTGAAGGTTATCGAAAAGCT
TGTGCAGGACCATGATGTCATCTTTCTGCTCACAGATTCGCGCGAAAGCC
GCTGGCTGCCCACCCTGCTTGGAGCGGCAAAGGAAAAAATTGTCATCAAC
GCAGCTTTAGGCTTTGACAGTTATCTGGTAATGCGACATGGCACTACGCG
TAAGGAAGCAGGCGACGATGGCCAAGAAATCGAAGGACTTAAGTGCATTA
ATGGCGATCAATTAGGTTGCTACTTTTGTAACGATGTTACGGCCCCTGGA
AATTCGCTCAAAGACCGAACTTTGGATCAACAGTGCACAGTGACACGACC
CGGAGTATCCAACATTGCGGCCAGCTATGCGGTGGAATTGTTGGTGGCTT
TGCTGCAGCATCCTCGTAAGGAGCTGGCACCCGCCTACTATGCACAGAGT
GGGCGTGGCAGGTCGGAGGAGACGGAAGAAAAGGTGCCGGAGGGTCTGCT
AGGAATTTTGCCTCACTCCATCCGTGGAATGCTGTGCAACTACGAGAATA
TTCTGCCCGCCACTCAAAAGTTTGCTCAGTGCATAGCCTGTTCAGCGGCC
GTCCTAAATGAATATAAAAAAGAGGGTCATGCTTTCCTGTTTAAAACTTT
TGAAACAGCCAAGTTTCTGGAGGATTTGACGGGAATCTCCGAATTCAAGC
GGTTAAACAGCGAGATTATCGATTTTGATGATGAAGAATTTGACATGTCC
GATAGCGACGAGGATTAGGTTCCACAAAATTGGTCAAGTTTTATCTTCAA
AGCAAAATATCTTAAATATGAAATTCAGCTTATTGTGGCTTTAATTTTCT
GCAGCATTTATAGTTCAATGTCTATACCAAAAATGTGTGTACTTCAATGC
TTTTATTCTATCTAGTCGTTAAGCAAATTGTGAATCATTCAAATGAAATT
GATGTGAAAATTAGGCATAAGAAAAATGTGAATTTACTATTGAAAATTGT
AATAATAAAAGTGTGAATTTACT
hide Other Products of this Gene
Other Transcripts
Name
FlyBase ID
Length (nt)
FBtr0086712
2395
 
Polypeptides
Derived from
THIS transcript
Name
FlyBase ID
Length (aa)
FBpp0085890
510
 
Derived from
OTHER transcripts
Name
FlyBase ID
Length (aa)
FBpp0085891
684
 
hide Comments
  • Transcript terminates at site supported by polyadenylated cDNA.
hide External Crossreferences
RefSeq - An integrated, non-redundant set of sequences
hide Synonyms
Atg7-RB
 
CG5489-RB
 
hide References ( 2 )
FlyBase analysis
FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome.
Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453]
FlyBase, 1996-, FlyBase inference based on genome sequence analysis.
FlyBase inference based on genome sequence analysis. [FBrf0104946]