Transcript Dmel\Psi-RA

General Information
Symbol	Dmel\Psi-RA	Species	D. melanogaster
Annotation Symbol	CG8912-RA	FlyBase ID	FBtr0087073
Feature type	mRNA	Associated gene	Dmel\Psi

Evidence Rank	Weakly Supported	Length (nt)	5687
Evidence Score	3

Map ( GBrowse )
Recent Updates
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 59 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	45530 AT02592 AT03891 AT09130 AT09435 AT17774 AT18229 AT31802 bs78f04 CK01.97A.D1 CK01.112C.G4 Dmel_neb_014415_0876_2668 EC34726 EK004038 EK014613 EK038007 EK054234 EK085905 EK089954 EK092431 EK095513 EK096825 EK099711 EK109545 EK125734 EK135437 EK156161 EK161137 EK174622 EK175150 EK188212 EK195749 EK208659 EK216161 EK219411 EK233603 EK234806 EK247148 EK250442 EK261349 EK269147 EK282643 EN04926 EP03343 EP08702 FGM315E03 LD40556 LP21287 RE16995 RP004023840 RP004075844 RP004201470 RP004218240 RP004330051 RP004407598 SD02488
End(s) extend beyond the annotated transcript, internally consistent	EK172843 EK206303 RP004256161
Sequence
	AAAAAACGCCTCCAATCAAGCTATAATGCTACACAATTTTTTTGCAAACG CATAATTTTCACTGAAAAGCCGAAAGAAAAATTAAAAAAAAAAACGTAGA AGCGCATGAAAAAAACGGCTCAACAATAAGGCAGAGTAGACATTCGAAAG CCACTTAAACAAATGCCATAGGAAGCGTTTATAGTATTTCCTCAGCATTT GTGAAAAAATCGTCGCTTTCGGCTATTGAATTTTCAACGCGTGCGGTCAA ACAGAACAAAAAAAAAACAAGTGGTAACCATAAAGAACCGAATTGAACCT ATTATAAACCCAGAACTATGAGCGACTTCCAGCAACAAGGCATCAATCAA TCGCAGGCACTCGCGCAGGCAATTCAGCGTGCCAAGCAGGTGAGTTCCCA CCACTTGGAAGAGGAAGAAGCGGAAGTGGGCATTGATTCGGCTTCTTTTG CCCCAATCCCCAAACCAGATCGCAGCCAAGATCCAGCCCAGCCAGCAGGG CGGCGGCACAGCGGGTCCATCGCCACCGTCTTCGGGTGGAGGGCCTGGCT TTAAGCGTATCAACGACGACGGCGACAGCGGTCCGGAATCCAAACGCTCC TTGGGCAGTCCGGAGTACGCCAACAACAGCTCCAACATGAGCAGCGGTAG CGGGGGTGGTGGTGGCGGCGGCGGAGGTCCCGGCGGTGCCAGTATTACTC AGGCAATCGCCCAGGCTGCTGCGGTAGCCGCTCGTTTGGCCGCCTCGGCG GGAACAAGCTGTGAGGAGCAGATCCGTCTGCCCGAATCGGTAGCCGGCGC CTTTATGGGTCGCTCCAGTAACGACACCATCACCCACATCCAGGCCGAGT CCGGTGTAAAAGTGCAGGTCATGCAGGATCAAGATCGCGTTATCATGTTG CGTGGTCAAAGGGATACAGTCACTAAGGGGCGCGAAATGATTCAGAACAT GGCCAATCGGGCTGGCGGGGGACAGGTGGAGGTGCTGTTGACGATCAATA TGCCGCCACCGGGACCTAGCGGGTATCCACCTTACCAGGAGATCATGATT CCGGGCGCCAAGGTGGGCTTGGTCATTGGCAAGGGCGGCGATACCATTAA ACAGCTGCAGGAGAAGACCGGAGCCAAAATGATCATCATCCAGGACGGAC CAAACCAGGAGCTGATCAAACCCCTTCGCATATCCGGCGAGGCGCAGAAG ATAGAGCACGCCAAGCAGATGGTGCTCGATCTGATTGCCCAGAAGGATGC ACAGGGTCAGCAACAGGGTGGTCGGGGCGGCGGCGGAGGTGGCGGCGGTC CAGGCATGGGATTCAATAACTTTAATAATGGCAACGGCGGCGAGAGCACC GAAGTCTTTGTGCCCAAAATTGCAGTTGGCGTGGTCATCGGCAAAGGCGG CGACATGATACGTAAAATACAAACTGAGTGCGGCTGCAAACTGCAGTTCA TCCAGGGAAAGAACGACGAAATGGGCGACCGCAGGTGCGTCATTCAGGGC ACTCGCCAGCAGGTCGACGATGCCAAGCGCACCATTGATGGGCTAATTGA AAACGTTATGCAACGAAATGGCATGAATCGAAATGGCAATGGAGGAGGCG GTGGCCCAGGAGGAGACTCTGGCAACTCCAACTACGGCTATGGGTACGGC GTAAATCACGCTCAAGGTGGACGGGAGGAAATTACATTCCTAGTTCCCGC TTCCAAATGTGGAATTGTTATTGGTCGCGGCGGTGAGACCATCAAGCTGA TCAACCAGCAATCTGGAGCGCACACTGAAATGGATCGCAATGCCAGCAAT CCCCCCAACGAGAAGCTCTTCAAATCTAAGGGCACCACCGACCAGGTGGA GGCTGCCCGCCAAATGATTTCCGAGAAGATCAACATGGAGCTGAATGTCA TTTCTCGCAAGCCCATCGGTGGAGGTCCCGGCGGTGGTGGCGGAAATTCT GGCGGTGGCCAGAACAATTCCCACCACAATCAGCAGCAAGGCGGCTATGG CGGCCAGAATCAAATGCAGGGCGGCGATCCCAACTCGGGAGCTGGCTACC AACAACAGCCTTGGGGTGGACCCTACGGGCAGCAGGGTTGGGATCCGTCC GGTCAACAGCAGCAAATGGCCATGGCTAATCAAGGGGGCTCTGCTGCGGG AGGAGCTTCCGGTGGTCAAGACTACTCGGCTCAGTGGATCGAGTACTACA AACAAATGGGATGCCATCGTGAGGCTGAAATGATCGAGCAGCAAATGAAG GCCAAACAGGCGGGCGGCTCCTCCGGTCCTGTCCAGCAGCAACAACCCCA ACAGCAGCAACAGTCCCAGCAGCAGACAGGAGGCGCCGGTGCCGGAGGAG CGGACTACAGTGCCCAGTGGGCGGAGTACTATCGCAGCGTGGGCAAGATT GAAGAAGCTGAGGCAATCGAAAAGACATTAAAGAATAAGCAGAACGGATC TGGTGGCCAGAGCAGTACGCCGAATCCCAGCCAGGGCGGCTCCGGCCAGC AGCAGCCCAATCCCGCTGCGGCGGCGGCGGCAGCAGCTGCTGCTGCAGCG GCGGCCGGTGGTTATGGCCAGAGCATGACGCCCACTCAGTATGCACAGTA TTCGCAGTATTATGCAGCTGCTGCTGCAGCTGGTGGTCAGCCCCAGGGAG CGCCTCAGCCCGGCGGAGGGCAGAGCGGTGGTCCGCCGGGCAACTATCCT GGCAATTATCCGGGCGCTGGTTACGGCGGCTATCCCGGTGCGCCGGGCCA ACAGCAGCAGAAATCGCACAAAAACGACAATCACTGAGGACGTTCGGATG TATCGGAATCGTCGGTAGGGGGAAGGAGGTGTATGTGGGAGTGGAAGCGA ACGCCGAAGTGGAAGATGCTGCGGGTTGAGGACGATGCAGGTGCCTTGAA TGGGTGATCTATTGTTCTACTATGTCCCTATGTCTTTTATCCCCCCACAA AACTAGCAAATCAGAAATGAAAAGCAAATGATTTTTAATTGCAATAACAA CAGCAAAAGCAAAAGCAGAAGCATCACCACCACCACATAGACAACACACG GGATGGAGGCGGACATCAGGCGAGGACCCGGATAAATCGGAGAACGTTAA GCTTTTGCAGAATTGTAAATTAATACTATTAACACTGTCTATTATTTGGA TACTGCATATAATTTCACCATAGCTTGTAAGAGATTATCCCGAGATCCTA AGTCTACTTTTACCTAATAATTATACATAATTCCGACCGATTGAAACATA ATGCTCTTGCTGTTCATGATCACCACTTGCACAGACATACTAAGAGACGC TAATTGAATCCGTTTTGGGTGTTTTGTTCATTTTTATACACATCTGCATA TATATAGTCATATATATATATATATATATATACATCGCATATATAGGTTC TTTCACCGTCAATTCAGGCAGCCAATCTGCAATGGGCGTTCAGTAATTAA AGACACCCTTTGTTAAAATTCTCAACTTTAATGGTAGCAATAAACAAATC GAACGTTTTATATACACGAACTCATTTTCACGTACTTAGCTTAGCTTAGT TGTACTAGAAGCCATTTGAACTATATATGATCGACATTTACACTTGATCA TATATACATATGTCTGCTGATCTGGTAAGATTTAAAAGATTTGATCGAAC CTTTTTATTAAATTTGATTCAAGTGAGGGCCAGGTACAAAAGGTTATCTT CCTTAATTGATATTTAACATCTTGCATAACAATATTTTCATCTTTCAGTT CTGGAGAATCTATGAAATCATTTTTGTAGCACTAAGGTGAAACTGAACTG AGTTTAAAATTATTTCCTGCTCTATAATTGTATATTTTTTTAAATTATAA ACCTGGTTTGAATACGCTTGCAATATTTACCTTTAAACGAACGCGCAGGA TAATCATGCTTGTTTTAATATCTATTTCACCAAATGCAAACATAAAGTAT GTTATTTTCAGAGGACGCTCTTCAGACCAGTTAATAGCAGAAATACGAAA TCAAACCCCAAAACTTTTTCACACTATAACAAATAACGAAAACAAAAAAA AACACGATGAAATACGAACCATACATATATTGTAAAAGTGTCAAACTTGG TAAGATTGTGTGTTGTTATTACTGTCTATTAAACATATTGCAATTGAAAC AATGAAACTTACCCAATGAATGTAGGTCTACCATAATTTAGTCTTAATAC CGATATATAATCTAAGTTTTACGTCTCCCCAAATATCTGATTGTTGCAAC AGCAGATCAACCATATTGTAACCGTTGTTCGGCCACGCGGGATCAGTTCG GGACTACCATCCAAATCCTGAACTCCGTCCTGCGGCCGGCCGGCAAAGCA TTGAATAAACATTTAATATACCATATAATATATATTCACATACATATATT ACCAGCACGGAGCATTTCGGTGCTGTGTGTCCTATTGCGTTTCTATTAAT TACATTTATACCCGTTACTAAACCAATCCTAAAACAAAATTTTAATGAAT AGTAACGGGTATCAGATAGTCGGGGCTCGACTGTATCGCTCTTGATTTAT TTATCCAGCTGATTGTTTATGCCACATATGAAAATCGTTTATTGAGCGTA TTTTCAGAGGTTCTGGTCGTTCTTGCTCGTGGAAGAGATCTTGGGGATCG GGACGGGCTTTTGACTTTTCCCAGGGATGGTCGATTGATTGCCACATTAT TGGGTATGCTTGGAACCACATTGGAGTACAATTTTAATATCAAACTGCAC ATATATTATATCCATAACTGATTATCCTGAATATTCTTTATACTACATAC TATTCCTTGACAATTGACTATATATATGCATATATTTATATACGTATTTC TCAATAATTGCCTAGCAAAACGAACGATATTTGATTTCCCGAACAGTGCT CCCTATTGATAAATTCTGTGCTGTATACATATTTGTAAAATATCGTTTAA AGGTATCATTTGCTTGCTCTATAAGCGGTTTACATTGGCTCCCAAGCCAA TCTCTAATTTATACTATTCCATATTGTGTACTTTAATATATTGAATATAT TTCGTATAATAAGAGCGATTCAGGTCTAGAATTAGGAAATTTTTCGAATA ATATGGCAGTTTGAAAGAGAAGAACCCAATTTTCAATGTTTTTGGGAAGT CGATTTTCTTTTTTCATTCTAGCAAAGGTTTTCAAGGATATCATCCTGCG TATCTTATATCGACCAAGGTAAGTATGACCCAACCAAATATTAAATGTAG AACGTTCAATAACCCATTTCGTTGAGCATTTCTTTTGGGTCCAATGTCAA GCCGTTTATTTTGCAATCAAATGATATTTTTGAAATTTACATTTCTGCAT ACATTTCCATTCGTTTCATTTAAATTACGTGCTTTGATCTATTTGCAGGA ACAATTCAGAGAAAAGTTGATTCCTTCTCCCGTATTATCCACACTTCTCA TTGATATATGTATTTTTGTCCCGAAATTGATATTTACATTGTTTTTTTAT AAACATATATTAACCATTTTTGACAATATATAAATATATATATTATATCT GAATCATAACTGACTATCTGTATGTTTCAGCGTTTTGTCCACTCGACAGC TTTCAATTACCACCCGGTAAATCCCCGACAGAAATTAGTTTAATTATTTT CTTAAATCGTTTAGATAATTGTTAAATTCAATTGTAG
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) Psi-RB FBtr0087072 3227 Psi-RC FBtr0087074 3435
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) Psi-PA FBpp0086221 716
Derived from OTHER transcripts	Name FlyBase ID Length (aa) Psi-PB FBpp0086220 796 Psi-PC FBpp0086222 797
Comments
	Based on cDNA(s) with retained intron; results in premature stop codon and/or downstream start; may or may not produce functional polypeptide. Extended 3' UTR based on RNA-Seq and/or EST data. Transcript postulated to overlap transposable element.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_166200
Synonyms
	CG8912-RA Psi⁺R4.2 Psi-RA Psi-RB
References ( 3 )
Research paper	Siebel et al., 1995, Genes Dev. 9(3): 269--283 Soma-specific expression and cloning of PSI, a negative regulator of P element pre-mRNA splicing. [FBrf0080395]
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]