A Database of Drosophila Genes & Genomes

FB2008_07, released August 8, 2008
 

Transcript Dmel\Rho1-RC

General Information
Symbol Dmel\Rho1-RC Species D. melanogaster
Annotation Symbol CG8416-RC FlyBase ID FBtr0087213
Feature type mRNA Associated gene Dmel\Rho1
Created / Updated 2000-04-11/2004-06-05
Evidence Rank Moderately Supported Length (nt) 1798
Evidence Score 7
Map ( GBrowse ) detailed view FBtr0087255 FBtr0087216 FBtr0087211 FBtr0087212 FBtr0087213 FBtr0087215 FBtr0087217 FBtr0087214 FBtr0087254
hide cDNA Clones Consistent with the Transcript ( 25 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the
annotated transcript,
internally consistent
End(s) extend beyond
the annotated transcript,
internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the
annotated transcript,
internally consistent
End(s) extend beyond
the annotated transcript,
internally consistent
hide Sequence 
GGGAAAAAATCGTCGAGTTCAATTCGAATTTTTAACTTCCAATGACGACG
ATTCGCAAGAAATTGGTAATTGTCGGCGACGGTGCCTGCGGTAAAACTTG
CCTTCTGATTGTCTTCAGCAAAGATCAGTTCCCCGAGGTCTATGTGCCCA
CCGTATTCGAGAATTATGTGGCCGACATCGAGGTGGATGGCAAACAGGTG
GAGCTGGCCTTGTGGGATACGGCCGGGCAGGAGGACTACGACAGACTACG
ACCGCTGAGCTATCCCGACACTGACGTCATACTGATGTGTTTCTCAGTGG
ATTCACCCGATTCGCTAGAAAATATTCCTGAAAAATGGACCCCAGAGGTC
AAACACTTTTGTCCAAATGTTCCAATCATTTTGGTAGGAAATAAGAAAGA
TTTGCGAAATGATCCCAACACAATTCGGGATCTAGCAAAAATGAAGCAGG
AGCCGGTGAAGCCGCAGGAGGGTCGCGCCATGGCCGAGAAGATTAATGCC
TTTGCCTATTTGGAGTGTTCGGCTAAGTCCAAGGAGGGTGTGCGAGATGT
TTTCGAGACGGCAACTAGGGCCGCGCTGCAAGTCAAAAAGAGGAAGAAGA
CCAGATGCCTTTTGCTCTAAAAGAGCAAATCAACAACATGAAAATCTTTA
CCACACACACACACAGCAAAAACAACAGCATAAACACACACAAACACACA
TACACACCTTTTACAACAATAACGAGCTGAACAACAACCACTCAACAACA
ACATCAAGAACAACCAGAACATCGGATACACGAAGCTGCACCACCACCCA
ACCAGCAACAAACATGAGCAGAAAACAGAGAGCTTGAGCTAGAAGATCAG
CGGAGGAGGGATGCAGCGAGATATAAGGGAAGGCAGCACCAAGTAGAATG
TCAAATGCGGATTTGATTTTATATACAGTCTAGTGTAGTTATAAACCGAA
GTAAACAACAGTAATAACTCTGGCATTATTATTTGTAAAAACTAGGGCAG
AGCAGATCAATCAGTCAGCCACTGCAAGCAAAAAATATATATCGATATAT
GTAAACATATTCAAGTTGTGTCCGTTTCTGTCCACCCCCTCCTCCTAGAT
GTATGTTATTATTTCGTTAACTGTGTTGTCAAGTGTAGAGTCGGCTGTGG
CTGGACGAGATTGTGTCGTATGCGAGGGTGAGTGAGTCAGGTGAATCAGT
GGAATTAGGAACAGAATCGGAAACGGAATCGGATGTTGGATCCCGGGGTC
CAAGGAGGTCGTAGGCGTCAAGATGAGAGTTATGTTCCCATTAAATCTAT
CAAATACAGAGAGACCAGGCCGCCAATAGGAGTTGGAAGCGAAACTACAT
TACAAGAGCCGAACTAAACACAAAACAAAACAAAACAAAAACGATAAATG
TTTATTTAACTAAACGTAAGCCACAAATGAGATGCATTCAGTTTTCGCGT
GGGAGATGCTAAGAGGGAAAATTTTTGATGAAGTGAAAAACTATTTCGAG
CGCATTAAGCGAGTTTTTAATATTTGTACTTTGCATTAAAACGAGTGGAA
AACATAAAAAAAAAAAGATACTACAAAACAACCAAACAACTATATGAAGA
GTATTTTATGATTTTATAAAATACGATTATACATATAATTATACTATACA
GTACATATGTGTATGTCTCTTTTTTTGTATTTTGTACCGTCAATCGTGTA
ATTCTCACACAGAAGTTGAAAAACTCGAAGATGCATCAGATACAACCAAA
CTATATTATACTTATGAATAAACAGTACATTTGATCTACTCTTGGTTT
hide Other Products of this Gene
Other Transcripts
Name
FlyBase ID
Length (nt)
Rho1-RA
FBtr0087211
1195
Rho1-RB
FBtr0087212
2029
Rho1-RD
FBtr0087214
1983
Rho1-RE
FBtr0087215
763
Rho1-RF
FBtr0087216
1972
Rho1-RG
FBtr0087217
1975
 
Polypeptides
Derived from
THIS transcript
Name
FlyBase ID
Length (aa)
Rho1-PC
FBpp0086355
192
 
Derived from
OTHER transcripts
Name
FlyBase ID
Length (aa)
Rho1-PA
FBpp0086353
192
Rho1-PB
FBpp0086354
192
Rho1-PD
FBpp0086356
192
Rho1-PE
FBpp0089128
192
Rho1-PF
FBpp0089129
192
Rho1-PG
FBpp0089130
192
 
hide External Crossreferences
RefSeq - An integrated, non-redundant set of sequences
•
hide Synonyms
CG8416-RC
 
Rho1-RC
 
hide References ( 2 )
FlyBase analysis
FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome.
Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453]
FlyBase, 1996-, FlyBase inference based on genome sequence analysis.
FlyBase inference based on genome sequence analysis. [FBrf0104946]