Transcript Dmel\Sox15-RA

General Information
Symbol	Dmel\Sox15-RA	Species	D. melanogaster
Annotation Symbol	CG8404-RA	FlyBase ID	FBtr0087576
Feature type	mRNA	Associated gene	Dmel\Sox15

Evidence Rank	Strongly Supported	Length (nt)	3651
Evidence Score	11

Map ( GBrowse )
Recent Updates
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 14 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent	FI01112 IP09065
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	55284 74141 102993 119303 214379.23 EK182152 EK204011 EK224760 EK238842 EP10561 IP08865 IP08965
End(s) extend beyond the annotated transcript, internally consistent
Sequence
	TCAGTTGGCCTGCGGTTCGTCATCAGCGTGGTTCATGCGGCTCCGACTTT CAGTTCGCCTTTAACTCTGACTCAAGCCCTGGCATCGGCGGAACTCGGTA GTGACTCTGGTGGCTCTCCATTGACATCGCCATCTGCGTCCCCGGGCTGT AATCATAAATATATATATATCTACATACAAACTGGCCCGCTGTACATAGG CCCAGTTAGTTAGTTTGTTAGTTAGTTAGTTAGTTACTTGCTTAGTAGTT GCTGTTGTGCCGTGAATTTTCATTTTCCCAAGAGCGCTATCCGCTGTTTG TATCTTGTGAAATGTCGAAGCCCTTGATTTTAGGCTACGGATACGTTCGT TAGTCAACCTTTAAACAGCTCGCTTTAGGGCCAAAAACTAATGAACAAGT GATTTTAAAGAACGTAGATCAATACCGGTAAAACTATGTAAAAAGTGACA CAATCTGTTTAATAAAAAGTTTACATCGTTCCGGTGTTGAAAAGTATCTT TTCAACACCAAGTGCCAATCGAAAATCCAAATTTGAAGTGTGTATTTTTC AATATCTTCAAAATAATCACCAGTGAATAGTGAGATTCAAAAATATATTT ACATCACTCGGTGATTGCGAAATTGTGGCCAAAATGTGGGTTAGGCTCTG AGCCACAAACAAAACAAAATCTGACAACAAATGGACGCAAATTCACACAT GCCGTGGCACATAAATTTATGGTTGGAACTGTAACTGGGCAAAAATGCTC GGCCCGGCAGACATCAGTAGCAGTAGTAGTGGCACCACCATCACCACCAG CGAACCACCAACCGCCACCACCCACCAATCCACCCGAACCGCCGACAAAG GGAAAAACTAACGGAATAATGCAACATTAAGCAAAATGCTGCTGGCCCTG CTAAAGCAAAGCCAACAACAACAACAACAACACCAATTTCAACCTGCCAC CACCGACGTCAGCAACAGCAAAAACAACAGCAACAACTACAACAACAGAA GCAACAACTGCAACTGCAACAACATCAACGTCACCGTCACCGTTACCACG AACATCGCCGTTGCCGTATAAAAATGGAACCCTCATATGATCACGAACAT CCACATCATCTGCTAACAAATTACAATTCGAAAAAGTATCCGCACGTCTC GCGCACTCCGGAGTACAGTCACTCCACCGGCAGCGATTATCCGGAGCACG GTGGCTATCTGACGGATGGACGCCTGATGCACGAGAGCAACAGCGATGCC GGGATCTACCACGTGCGCCAGGGAAGCGAGCACTCCTCGCCCAGTCTGCA CTCGCCAGCCATACAGAGCTCCGGATACGAGAATGAGCACCTGAACGAGG CGGTTCTGGCCGCGCACAGCCACAGTCACTCGCCCATGCCGATGGTGTCC AGTGCCTATGTGGGCGGAGGAACTGCCTCCGGATCGCTGATTAACAGCAA TATTCCTCTGCTCGGTGGCGGCGGTAATTCCGTACTGAACAAATTTCTAT CGCATCCGCACGCTGGCATGGTGGGCGGTGGAACCGGACAGATGGAGGAC TGCACATCGCACTCGCCAATTGAAGCGGCGTCCATGTGGAGCTACGACTA CAAGGGCGACCTGTGCGCGCCCAATTGTGGCTATCTGGAGCGACACAAGC CGCTGCCCGCCGACCTTAAGTATCGGCCCGGCGGAACCCAGTCAAAAAGT GCCAAAGAATCGCGCATCCGGCGGCCGATGAACGCCTTCATGGTCTGGGC CAAGATCGAGCGCAAGAAGCTGGCCGACGAGAATCCCGATCTGCATAATG CCGACCTCAGCAAGATGTTGGGAAAAAAATGGCGATCGCTGACGCCGCAA GATCGCAGACCCTACGTGGAGGAGGCGGAGCGTCTGCGGGTGATTCACAT GACGGAGCATCCGAACTACAAGTACCGACCCCGACGACGCAAGCAGTCCA AGCTGCGGGCCATGCAGCCGGGCGGCAAGGAGCAGAGCGAGAGTTCACCC AATCCGGGCACTGGTGGATCCAAGTCGAATCCCAAGCTGGCCACACCACC GTTGGCCACCGCATCATCCAGCTATACAACGCCCACCGACGAAAGCACCT GCAATTCCACGAACCAGAATCACGGACAATCAACTCCGGGTGGCCTGTAC GAGCAACCGCTGAAGCCCACGTACTCGCCCAGTTCCGTGGACTGCTACAG CAATGCGGACAGCACGGAACAGATCGAGTCACTGGCCGCCAACTGTCCGC CCGCCCTGCTCAATGAATCGTCGCCCACGGGCGGTGGCTACGACAACTCG CTGTTGCTCAAGAAGTTAACCAAGCCGTCGCCGAGTCGTGCGGCCAAGTC GCGCCAGGAGAAGCTGGCCAAGTCCGAGGAGAAGAACAAGGGGTCACAAT CGCAGGGACAGTCTCAGCAAGGTATATATGCTGCCACCTATCCGCTAGCA CCCACCTCCGTGGCCGTGGTGGCCGCCAGGGGTATGTACGTGACGTGCAA CAATCGGGGATTGCTGGATCATGGTCACTCCGTCAAGGGCACATTCTATC CACCAGTATCCGTTTCGGAAGATGACAATAGCACCTCAATGCGGAACAGC ATTAGTGCTCTGCAGCAGCACTGTAATGTGGTCACAAGTACACCCTCAAG CTCCGGCGGCACCATGCCAACCAGCGAGATGAGCAGCTACACGGTCTCCA TGGCGGATAACTGCGGAAATCTCAGGCTCAGCATGAACGAGTTGTCCGGC AATGAGTATCTGCCCAGCGCCAATGCCTATGGGATGCAATACGAGGACTT CCTGCGCTATCAGAGCAACGATATGGACTACTCAACGTCGGCGGTGGAGC ACAAGGAGACCACATCGGATTCGGCGAGCGGCCAGAAGTGCCTTAAGTAT CCGGACACGAATCAGAACTACGACGACTACGAGGCGGAGGCCTACAGTAA CGCCATGCTGCCTGCAACGGCAGCTAGCTACTACACCCAACTTCCGTATC CGCCCACCTCGCTGGCCGCCTTTCCTCTCCAGCTGGCCGTGCCGTTCCAG CAGACGACATCGGGCGCCTACGGAGCGCAGCCCATTCAGAGTGGTTACCT GCACTACGGCAACTATGGCGGATACGAGGGAATGGCCCAGAGTCAGCCAC AGAACCAAGCGCCCGTCCACCATCAGCAGGCATCCCACTCGGCTCCGCCC TCCCTGTCAGTGCCACCCAACCAGACGGTGACCTCCAATTCGGCAGCAAT TAGCATGCAGCAGCACCATCATCATCACTTTGGACCCGCACCCGGCATGG TGGGCGTGGGCGTGGGAGTGGGCGTCGGAGTCGGAGTCGGTGAGATGCTC TTCGAGCAGCAGCAGCGCAAAGATGATGAGATTAGCAACATTCTGGCAGG AGTGCGCAAGACCTGCTACAGCAATTGACTCTGATCAGACGACATTTGTA ATATTTCGAGCATAGAGTTTTAGAGAGTGGTTTAGGTAGTCTTAAGATTG CTTTCCGCACCCACAATGTTCTTCCAGCCCCTTCCCCATAAAACCTAGTA GTAGAACCACCCATTGAATTGTACAATTATTAGAACTGCATAGATACGAT ACAAAACAAAAATAAGAGACATAACGAAATAAAGTAATTCCTAAGTAATC G
Other Products of this Gene
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) Sox15-PA FBpp0086702 784
Comments
	Transcript terminates at site supported by polyadenylated cDNA.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_079015
Synonyms
	CG8404-RA Sox15-RA
References ( 2 )
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]