Transcript Dmel\Atpα-RB

General Information
Symbol	Dmel\Atpα-RB	Species	D. melanogaster
Annotation Symbol	CG5670-RB	FlyBase ID	FBtr0089511
Feature type	mRNA	Associated gene	Dmel\Atpα

Evidence Rank	Strongly Supported	Length (nt)	4801
Evidence Score	15

Map ( GBrowse )
Recent Updates
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 98 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	42293 42528 66848 67424 78599 101637 103344 105129.2 118329 156875 165136 165609 172731 172812 173767.2 174066.2 176434 214567.58 274421 280705 282545 527148 CK01.60A.A2 Dmel_dig_012939_0667_2687 EC01588 EK010450 EK044518 EK048054 EK050657 EK056453 EK061628 EK063333 EK072615 EK076233 EK110616 EK129442 EK134725 EK149143 EK154045 EK157358 EK187407 EK194912 EK195448 EK208026 EK237311 EK269651 EK270255 EK274051 EK278313 EK301939 EK308128 EN07347 FGA007H01 FGM105C03 GH01419 GH04314 GH04496 GH14588 GH18736 GH20172 GH20563 GH23749 GH25005 GH26570 GM06976 HL01181 HL01521 HL02161 HL02926 HL03332 LP11510 LP17021 RE57803 RH17468 RH20833 RH29111 RH39057 RH61666 RH61841 RH66563 RH69835 RH70634 RH74629 RP004242334 SD05455 SD06629
End(s) extend beyond the annotated transcript, internally consistent	9731 73888 145154 175329 193920 CK01.114D.D7 EC40326 EK109410 EK252622 EK274344 EK297042 RE56682
Sequence
	GTTTCAGTCGAACGTCGAATCCGAACTGGGAAGGTCCAACTGTGACAGCA GCAGCTATCTCGTCTCTTTGTCGGGTGGTACAGTACAGCTCTGCTCCCCT GCCGCCCGCCCGCCCCCTCGGCGCTGGTGTGTGCCCGCTGCTCTGCTTAC ACAATAACTGTGCATCGATTGAGTCCAGCTCCAGCGAGAAGAGAAGCAGC CCAGGACTAACTCTCGTTCGACATAAGAATAAAAGGATATTACGTTAGCG TACAGCAGTCGTGTGTGATCAGTATTTGTTGTATTTGTCTCGTTCCAACG CGAATCGGTTCTAGTGCTGAAAACAAGTTCAATACTGCTAACGGGGTAGT TTTCTGCGAAAGCCCCCAAAACACAATACGCAACGCCAAGCGCAAAAATT GTGTAATAGCACCCAAACGTGTAAAAGTCAAGACGCAAGATGCCGGCCAA AGTTAATAAAAAGGAGAATTTAGATGATCTCAAACAGGAGTTGGATATCG ATTTTCATAAAATCTCTCCTGAGGAATTGTATCAGCGCTTTCAGACACAT CCCGAAAATGGTCTAAGTCACGCCAAGGCCAAGGAAAACTTGGAGCGCGA TGGTCCCAATGCGCTGACGCCACCCAAGCAGACGCCCGAATGGGTGAAGT TCTGTAAGAACCTGTTCGGTGGCTTCGCCATGTTGCTGTGGATCGGTGCT ATTCTCTGCTTTGTGGCCTATTCTATCCAGGCCAGCACCAGCGAGGAGCC GGCCGACGATAATTTGTATCTGGGTATTGTACTTTCCGCTGTCGTCATCG TGACGGGCATTTTCTCATACTATCAGGAATCGAAAAGTTCTAAGATCATG GAATCGTTCAAGAACATGGTACCCCAGTTCGCCACCGTCATCCGCGAGGG CGAGAAACTCACGCTGCGCGCTGAGGATCTCGTTCTGGGCGATGTCGTTG AGGTGAAGTTCGGCGACCGTATCCCCGCTGATATCCGCATCATCGAGGCG CGCAACTTCAAGGTGGACAACTCCTCGCTGACCGGCGAGTCGGAGCCGCA GTCCCGCGGTGCCGAGTTCACCCATGAGAATCCGCTGGAGACCAAGAATC TGGCCTTCTTCTCCACCAACGCCGTCGAGGGCACTGCCAAGGGTGTGGTC ATCAGCTGTGGCGATCACACCGTCATGGGCCGCATTGCTGGCCTTGCCTC CGGTCTAGACACCGGCGAGACGCCCATTGCCAAGGAGATCCACCATTTCA TCCACCTTATTACCGGCGTGGCCGTGTTCCTGGGCGTCACCTTCTTCGTG ATTGCCTTCATCCTGGGCTACCACTGGCTGGACGCTGTCATCTTTTTGAT CGGTATCATCGTCGCCAACGTGCCCGAGGGTCTGCTGGCCACCGTAACTG TGTGCCTGACCCTTACCGCCAAGCGTATGGCCTCAAAGAACTGTCTGGTG AAGAATCTGGAGGCCGTGGAGACCCTTGGCTCCACATCGACCATCTGCTC CGATAAGACCGGCACCCTCACCCAGAACCGAATGACGGTCGCCCACATGT GGTTCGATAATCAGATCATCGAGGCCGACACAACTGAGGATCAGTCGGGT GTTCAATACGATAGAACCAGCCCTGGATTCAAGGCGCTCTCTCGCATTGC CACTCTCTGTAACCGTGCCGAGTTCAAGGGAGGCCAAGATGGCGTCCCAA TCCTCAAGAAAGAAGTCAGTGGAGATGCCTCCGAGGCTGCTCTGCTCAAG TGCATGGAACTGGCTCTGGGCGATGTGATGAACATTCGCAAGCGTAATAA GAAGATTGCCGAGGTGCCCTTCAACTCCACCAACAAATACCAAGTGTCCA TCCACGAAACCGAGGATACCAACGATCCCCGCTACTTGCTCGTAATGAAG GGAGCCCCCGAACGTATCTTGGAGCGCTGCTCTACCATTTTTATCAACGG CAAGGAGAAGGTTCTGGACGAGGAGATGAAGGAGGCGTTCAACAATGCCT ACATGGAACTCGGTGGACTGGGTGAGCGCGTGCTCGGTTTCTGTGACTTT ATGCTGCCATCCGACAAGTATCCCAACGGCTTTAAGTTCAACACCGACGA CATCAACTTCCCCATCGATAATCTGCGTTTCGTCGGCCTTATGTCCATGA TTGATCCCCCACGTGCTGCCGTGCCCGATGCCGTTGCCAAGTGCCGATCG GCCGGCATCAAGGTCATCATGGTCACCGGCGATCACCCGATCACTGCCAA GGCCATCGCCAAGTCTGTCGGTATTATATCCGAGGGCAACGAGACCGTCG AGGACATTGCCCAGCGCCTCAACATACCCGTCTCTGAAGTGAATCCCCGC GAGGCCAAGGCCGCCGTCGTCCATGGCGCTGAGCTTCGTGATGTGTCCAG CGACCAGCTGGATGAAATCCTCCGCTACCACACCGAGATCGTCTTCGCCC GTACCTCGCCCCAGCAGAAATTGATCATTGTCGAGGGTTGCCAGCGCATG GGAGCTATTGTGGCCGTGACTGGTGATGGTGTCAACGATTCTCCCGCTCT GAAGAAAGCCGATATCGGTGTTGCCATGGGTATAGCCGGTTCCGATGTGT CCAAGCAGGCTGCTGACATGATTTTGCTGGACGACAACTTTGCCTCCATT GTGACTGGTGTGGAGGAGGGTCGCCTGATCTTCGACAACCTGAAAAAGTC CATCGCCTACACCCTGACCTCCAACATTCCCGAAATCTCGCCCTTCCTGG CCTTCATCCTCTGCGATATACCACTGCCACTGGGAACCGTGACGATTCTT TGCATCGATCTGGGCACTGACATGGTGCCAGCCATTTCATTGGCCTACGA GCATGCCGAAGCCGATATTATGAAGCGTCCACCACGTGACCCCTTCAACG ATAAATTAGTGAACTCAAGGTTGATTTCGATGGCCTACGGACAGATCGGC ATGATCCAGGCCGCCGCCGGCTTCTTTGTGTACTTCGTCATCATGGCTGA GAACGGCTTCTTGCCCAAGAAACTGTTTGGCATTCGTAAGATGTGGGACT CAAAGGCTGTTAACGATCTAACTGATTCCTACGGTCAAGAATGGACCTAC CGCGACCGCAAGACCTTGGAGTATACCTGCCACACGGCCTTCTTCATCTC GATCGTGGTTGTGCAATGGGCCGATCTGATCATCTGCAAGACGCGTCGTA ACTCGATCTTCCAGCAGGGCATGCGCAACTGGGCTTTGAACTTTGGCCTC GTCTTTGAAACCGTGCTGGCCGCGTTCCTCTCATACTGCCCGGGCATGGA GAAGGGTCTGCGCATGTACCCCCTGAAACTCGTCTGGTGGTTCCCGGCTA TTCCATTTGCGCTGGCCATCTTCATCTATGACGAGACCCGTCGTTTCTAC TTGCGCCGCAACCCCGGAGGCTGGTTGGAGCAGGAGACCTACTATTAAAC ACCCACACTGCTACACTCCCACACACACAGCCACATGCCCACACACGAAT GCACACCACAACAAGAGCAACCAGGAACACCCGCAAACAACACCTACAAA CCATGGAGAGCAACAAATAGAAATGTTTATGAACCACAAAACCCACAAAA GCAACACAACCACAGTAATAGCAACAGCAGCAGCAACGGCAACAACAACA GCAACAGCTACGTCTACAACAAGCTACAGCAAGAACATATTACAATATAT TTTATTTTTTTAATTTAATTATTTAAAGTAAACGAGGATAAACAAAAATG CAAGCGATAATTATTTTAAACGTTAAGTAAATTTAAATTATAAATTAAAG CTAAAAATAAGATTTAAATAAAGTATAAATGAAAATAAAACAAACAACAA AAACGAACAACAATTTCGATGAAACACCAATCACATCCAGACAAGAACAA CAACAAAATCAACCAGTAACTAAGCAAAACAGTAACAAGAACATGTTTTT AGTAAAATTATTAACGTAACGAGAACTGGATGAGGCGATTTTTATCGCCA CAATAACAAGATCCCAGAAAGCTAACACACACACACGCACTCACAAACAC ACTCACAAATACACACACACACACACCGATACACAACGCATGACGAGACA AAGTATATAAGAAGTTTAGAGAAATTATAAAACGAAGTAAATAAAAAGTA AAATGAGGAAAGAAAACAATGAAAACCCCTAGCGTAGTTACCAAGTAAGC CGTGAAAAGTAAAGCCCAATAAAAACCACAACAACAACAACCAAAACAAA AGAACAGAAATTAATTTGCAAAACTTGAAACTTGTGTGTGTAAACGCAGC TTAGCGCAGAAGAACGAAATATATATATAAACAGAAGAAAAACCACAAGA AATGTGAACACGACGAATATAATTGTTTATATATATACACACATATATTA TATGGAAAAAATTTGATTATATAAATGGAGCTATACAACAATACACCAAA AACCAAAATTGAAACCATAACGAAATCGACCGATCTGCACTTGGCACTAC GCCGAGTTCCGGATAAAGGTCTCCGAGCAATGTTTGGAGACCTGCCGGTC TAGAATTTGTTAAAATCTAATGAAAAAACCAACTAAATGTTTAATAATAA ACCCCCTTAAACCAATTGACATGCAATATTATGCTTTGTGTGCATTTAAG CCCAAAAGAACCGATGCCGAGATTCGGTGGGATTAAGTCCCCCGATGTCG ATATCGAGATTCAGATACAGATACCATTACCGATACCTAGGCCCAGAAGG AAAAGATAAAACCAAATAAAACTAAAAACCAAATTCAATACGAAACAAAA G
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) Atpα-RA FBtr0089510 3624 Atpα-RC FBtr0089509 4590 Atpα-RD FBtr0089512 5099 Atpα-RE FBtr0089513 5026 Atpα-RF FBtr0089514 4590 Atpα-RG FBtr0089515 4590 Atpα-RH FBtr0089516 4801 Atpα-RI FBtr0300191 4590 Atpα-RJ FBtr0333324 5545 Atpα-RK FBtr0333325 4734
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) Atpα-PB FBpp0088503 1002
Derived from OTHER transcripts	Name FlyBase ID Length (aa) Atpα-PA FBpp0088502 1041 Atpα-PC FBpp0088501 1002 Atpα-PD FBpp0088504 839 Atpα-PE FBpp0088984 1002 Atpα-PF FBpp0088983 1002 Atpα-PG FBpp0088982 1002 Atpα-PH FBpp0088981 1002 Atpα-PI FBpp0289428 1002 Atpα-PJ FBpp0305516 1002 Atpα-PK FBpp0305517 1002
Comments
	Transcript terminates at site supported by polyadenylated cDNA.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_169937
Synonyms
	Atpα-RB CG5670-RB
References ( 3 )
Research paper	Sun et al., 1998, J. Neurochem. 71(1): 142--151 Functional analysis and tissue-specific expression of Drosophila Na⁺,K⁺-ATPase subunits. [FBrf0103046]
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]