Transcript Dmel\TBPH-RC

General Information
Symbol	Dmel\TBPH-RC	Species	D. melanogaster
Annotation Symbol	CG10327-RC	FlyBase ID	FBtr0089625
Feature type	mRNA	Associated gene	Dmel\TBPH

Evidence Rank	Weakly Supported	Length (nt)	3210
Evidence Score	3

Map ( GBrowse )
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 22 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	17174 28962 44083 71862 191262 214353.72 523296 CK01.32A.E4 CK01.131A.G4 EC43789 EK128730 EK160256 EK174830 EK200211 EK292014 EN03763 EP15059 GH13570 GH14113 LP06661 RE50724
End(s) extend beyond the annotated transcript, internally consistent	RE09981
Sequence
	TCAGGCGATACATACAAAGGAAAAGAAAATCAAAACGGAAAGCGAGAAGA AATGCTTCACTCGTCGTTTGAAAATTTGTTAAGCTGTCAATTGTAAATAT TACCTGATTCCTATTTCGCACCGATTGAAAGTGGTTGTGCATCGAAGCGT GTGTTGTGTCAAGAACCGAGCGTGGAACGTACAGTGAATACCTGATTTTG CCTGGGTGTGAATCGAATTCGTGTGAGAGAGCGTGCGATCTGAGATCTGG GATCAGAAATCTATATCTACTTGCCATACGCAGTCAGAAATTACAGCAAC CAACTAATCCCTGTCAATAGTGTAAGAATTGTTGTGTAACCAACCATCTT TTAGGACCGCCAAACTGCCTCCGTCTACACATTATGTCCTCCCCTCGACG ATTGCGTTTGTGTGCGTGTGTGTGTGTGCCACACACTTGCACTCACACAC AGACGACAGGATTGGATATTTTCAATTTATGTGGCTTTCATTCATTGATT TTCCAATTCCTGCCGCGATTCCACACTCACAAACGTCAGTTTACTCGTAT TAAGTGGGTGAAATATCTGTTTTCTTGAGTAGTTCAAAACATATACATAT GTATGCCATACATCGTAAACTTGGGATTGGGTATTCTTCTTTTGTTTATT AACTAAATGTACGTAGAATAGGCATTTAGCCGATGGTGGGACATAAGTAG CGTCTGATTCAGAGAATTTTTAACTAATAATAACGTAAAGAAACGCCTAA ACATGAACACTAATAATATATGAATATGTTTGTAATACTTACTAAAATTA TATCATCGAAATTACAAGAGATAGAAACATTGTTTATTTGTCGTTTTTAG TAGATTGACCTAGTGTAGGATCCTTTTTGTTTTGGCTTGGTCCCACGAGC AATGTGTGTATAGAGTGGTTCGGGGCAACCTTTTTGTGTTGAATATTGTA CCTTGGGATGCATCTGAATAGAACGGATGAACTGAGTGAGTGCATTCATG AATGCAGCGATGCAGAATATGTGGGATGCTTCCGTTGACTGAATGACATG GTGGATCATTTCTAGAGCGAAGTGTGAGCCCCTGCGGCGATAGAGTTCTT TAATCCCCTCCTCGTTTCTAGCAGCCTTCTAGGAAATGGATTTCGTTCAA GTGTCGGAGGAGGAGGGCGACGAGCCCATCGAGCTGCCGGCTGAGGAGGA TGGCACTCTGCTTCTGTCCACACTGCAAGCTCAGTTCCCTGGATCCTGCG GTCTGAAGTACCGCAACCTGGACACGAAGGCTGTGCGCGGAGTTCGCTCC AACGAGGGCAGACTGTTTCCGCCCAGCGTGGAGTCCGGCTGGGGCGAGTA CGCTTACTTTTGCGTCTTTCCCAAGGAGAACAAGCGCAAGAGCGACGATA ACTTGGAGAACTCAACTGCCAAGACCAAACGCATCGAGACCCGTCTGCGC TGCACTGATCTCATCGTGCTCGGCTTGCCGTGGAAGACCACAGAGGAGAG CTTGCGTGAGTACTTCGAGACCTACGGCGAGGTGCTGATGGCCCAGATCA AGAAGGACACCAAGTCGGGCCAGTCCAAGGGCTTCGGTTTCGTGCGCTTC GGCTCTTACGATGCCCAGATGCGCGTGCTCACCAATCGCCATCTGATCGA CGGTCGCTGGTGCGAGGTTAAGGTGCCCAACTCGAAGGGCATGGGCCACC AGGTGCCTTGCAAGGTGTTCGTGGGCCGCTGCACCGAGGACATTAACTCG GACGACTTGCGCGAGTATTTCTCCAAGTTTGGCGAAGTCACTGATGTGTT CATTCCCCGGCCCTTCAGGGCCTTTAGCTTTGTAACCTTCCTTGATCCCG ACGTGGCACAGTCCCTGTGCGGAGAGGATCACATTATCAAGGGCGTTTCG GTCCATGTGTCGAATGCTGCTCCAAAGGCCGAGCAGAACAGAAACCAACA GGTCCAGAGCTACAACTACAACTCTGCCAACAGCTTTGGCATGCACTCAT ACCACCCACAGGGTAACCACATGAATCCGGGCCGCAACGGACACCACCGA GGTAATAACCAACACAATGCTCACGGCGGTGAGAACGCAATTGTGCCCAA TAATCACAACATTGGCACCGCCGGCTACGGCATGGGTGGCAACAATTACG GCGGCAACTCGGGCGGGGGCTACCACAACAATGGCGGCAATCACTCCAGT GGCGGGAACACGAACCGCCAGGACGGCGGCAGCCAGTACAACAGTCGCCA GTCGAATTTTCACGGAATGAACCAGCCGCATAACGGCAACGTGGGCGGCA GCAACGGCTGGATGAACCGTGGCCACCTGGACATGCCCAACCTGCAGGCC CTGGGCATCAACTCGCAGGGATCGAGCTCCTCCAACCAGGGCCAAAACAT GAGCAACCAGTCAATGCTCAATCTCAACTCATTGCCCATCAATCCCGCAC TGGTCGCTGCCGCCTTGAACCAGTGGAGCCTGGTCGGCAACCAGCTGCAG AACCAAAACCAGGACCAACAGGGCGGCAATTTTCTATCTTGGATGGCTCA GAACGGGGGCCACAACAATGCCAACAACTTTGGTGGACGGAAGGGGCCGA ATAACCCGAACAACAATCCGGCCGCCAACGGAATAAAGACCGACAACTCG GAGCCACAGAATGGGAACACCGGTTGGTCGAACCAGAGCAGCGGATCTCA AAACGCCGCGGAGAAGTCAAACTTTCTTTAAGGCGGTGCCTGTCACCCAA TGATGTGGTTAATGTGGTTAACCAACACCTCTGTAGCTTACTTAAATTTA CATATATGTATTCCACATACAAACCAGTTAAGAATTGTATTTAATATGTA ATAGATATTTTGATAATTGTAAACAAGATGACACTGGATGGCTAATAACA CAATTGATAAAACACACTTCAAAATAAATTCTGCGCCAAAGCTCAGTAAA AATTGTATCATTGTATCACTTAAGTAGAATTTGATTTGTATTTTGTTGTT TATTAAATATATTTTGGCTTACGCTAAGAAAGTTTAGTTATAAAGATTGT GCACTTATAATGCTGGATCTGCGGAGAATTTCCAATATAACAAAGTTTTC TTTAAGATATCTAAACGAATTTGGCGCAGCCTCATTTTAGAGGAGAATTC ATTTAACATGTACATTCATTTCAAAAAATAAAGAATGCAAAAGCATATTA GTACAAAGTG
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) TBPH-RA FBtr0089626 1705 TBPH-RB FBtr0089624 1915 TBPH-RD FBtr0089627 2175 TBPH-RE FBtr0301643 2178 TBPH-RF FBtr0301644 1918
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) TBPH-PC FBpp0088568 531
Derived from OTHER transcripts	Name FlyBase ID Length (aa) TBPH-PA FBpp0088569 332 TBPH-PB FBpp0088567 531 TBPH-PD FBpp0088570 531 TBPH-PE FBpp0290857 531 TBPH-PF FBpp0290858 531
Comments
	GC splice donor site postulated. Transcript terminates at site supported by polyadenylated cDNA.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_134318
Synonyms
	CG10327-RC TBPH⁺RC TBPH-RC
References ( 3 )
Research paper	Lukacsovich et al., 1999, Genomics 57(1): 43--56 The Drosophila melanogaster 60A chromosomal division is extremely dense with functional genes: their sequences, genomic organization, and expression. [FBrf0108232]
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]