Transcript Dmel\Muc11A-RA

General Information
Symbol	Dmel\Muc11A-RA	Species	D. melanogaster
Annotation Symbol	CG32656-RA	FlyBase ID	FBtr0089803
Feature type	mRNA	Associated gene	Dmel\Muc11A

Evidence Rank	Moderately Supported	Length (nt)	3332
Evidence Score	7

Map ( GBrowse )
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 24 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	164381 214375.15 CK01.75C.E12 Dmel_dig_013254_0629_2051 Dmel_dig_018410_0659_2088 Dmel_dig_019431_0645_2227 Dmel_neb_012916_0082_0698 EK059250 EK268553 LP11046 RP003044378 RP003066640 RP003081702 RP003166716 RP003229707 RP003274640 RP003359251 RP003380005 RP003457065 RP003532249 RP003550769 RP003564709 RP003641269 RP003642436
End(s) extend beyond the annotated transcript, internally consistent
Sequence
	GGGGATAGTAACGATTCTTCATTCGAACCAAAAACACATCCAACGAACAC GATGACAACGAACCGATCCACCAGACTACTGGTGTTGCTAGTGTTGACCG CCCTGGTGGCCAGCCATCAGGCGCATGCCGCCGCCGTGGGATTGAAGTGC GGTGGTAAGAGCGCCGTCTGCGTGGGACCACTCTCCTATCAGCAGTGCGT TGATGACCTGACCACCGGTCCGGTGGTGCCATGCGCATTGAACACCCGCT GTGTCACCGACGGCCTCGAGATTTGTGTGCCGGTCAAGTCGGCCGCTGAG GCGCCCACGGCGGCTGTCGCCAAGATGGTGACCATCACCGACAGTCCCGT TGTGAGCGAGTCGGCTCCGCTAGTGGATTCCACCAACAGCGGTTCCGGTG TAGAGATCTCCACCGAGGGCGCACCAGCCAGCGCTGTTCCGACTAAGCCA TCTATTCCGGTTGAGACCACTCAGGCACCGGTTGAGACCACCCAGATTCC GCTCGAGACCACACAGGTTGCGGTTGAGACCACCCAGATTCCGCTTGAAA CCACCCAAGCTTCCGGCGAGACAACTACAGCAGCCATTGAGGAGACTACC ACAGGTTCGGAAGCACCACTGGAACCGGAATCGACGGTGCCCAGCGATAC AACTCCCGTGGACTCCACATTGGCACCCGGATGGGAAGGCACTTACCCAA CCATTGAACCCAACACACCAGCAGAAGATCCCAACGCTCCTGCGGGAACT ACTCTTGCTCCTGGCGAAGTCGATCCCAACAGCCCCATTGACCCCAATTC ACCTCTGGACCCGAACGCACCAGAAGAATCTACTAACGAACCCGGCTTAG TTGACCCCACCCTACCTGCTGACACAACTACTGCTCCAGATTCCCCTGTT GAAGGATCAAGCGCAGCTCCTGGCACACCGGCTGATGTCACAACTGCCGC TCCTGGTGCTCCAGCTGATGGATCATCTGCCGCTCCTGGTTCTCCAGCTG ACGGATCTTCCGCTGCTCCTGGCTCTCCTGCTGATGTCACAACTGCCGCT CCTGGTGCTCCAGCCGATGGATCATCTGCCGCTCCTGGCGCTCCAGCTGA CGGATCTTCCGCTGCTCCTGGCTCTCCTGCTGATGTCACAACTGCCGCTC CTGGTGCTCCAGCCGATGGATCATCTGCCGCTCCTGGTTCTCCAGCTGAA GGATCTTCCGCTGCTCCTGGCGCTCCTGCTGATGTCACAACTGCCGCTCC TGGTGCTCCAGCCGATGGATCATCTGCCGCTCCTGGCGCTCCAGCTGACG GATCTTCCGCTGCTCCTGGCTCTCCTGCTGATGTCACAACTGCCGCTCCT GGTGCTCCAGCCGATGGATCATCTGCCGCTCCTGGTTCTCCAGCTGAAGG ATCTTCCGCTGCTCCTGGCGCTCCTGCTGATGTCACAACTGCCGCTCCTG CTGACGGATCTTCCGCTGCTCCTGGCTCTCCTGCTGATGTCACAACTGCC GCTCCTGGTGCTCCAGCCGATGGATCATCTGCCGCTCCTGGCGCTCCAGC TGACGGATCTTCCGCTGCTCCTGGCTCTCCTGCTGATGTCACAACTGCCG CTCCTGGCGCTCCAGCTGACGGATCTTCCGCTGCTCCTGGCTCTCCTGCT GATGTCACAACTGCCGCTCCTGGCGCTCCAGCTGACGGATCATCTGCCGC TCCTGCTGACGGATCTTCCGCTGCTCCTGGCTCTCCTGCTGATGTCACAA CTGCCGCTCCTGGCGCTCCAGCTGATGGATCTTCTGCCGCTCCTGGTTCT CCTGCTGAAGGATCCCCTCCCGCTGGAGGATCCCCTGCTGGTTCCAATGT CCCCGCTGGTGGAGACCCTGCTGATTCCAATGTCCCCGCTGGTGGAGCCC CTGCTGATTCCAATGTCCCCGCTGGAGGAGCCCCTGCTGATTCCAATGTC CCCGCTGGAGGAGCCCCTGCTGATTCCAATGTCCCCGCTGGAGGAGCCCC TGCTGATGCCAATGTCCCCGCTGGCGGAGCCCCTGCTGATTCCAATGTCC CCGGTGGAGGAGCCCCTGCTGATGCCAATGTCCCCGCTGGTGGAGCCCCT GCTGACTCCAATGTCCCCGCTGGAGGAGCCCCTGCTGGTTCCAATGTCCC CGCTGGAGGAGCCCCTGCTGATTCCAATGTACCCGCTGGAGGAGCCCCTG CTGATTCCAATGTCCCCGCTGGTGGAGCCCCTGCTGGTTCCAATGTTCCC GCTGGTAGCTCCCCTGGATCATCTGTTCTGGGACCAAATCCGCCAGCTGG CTCAGTTGTACCATCGATTCCTGTACTTCCTGGCGGAGCTGGCTCTTGGC CTTGGCATCCTCGACCAAACATTCCAATCGTGCCACCGACCTGGAGGCCC CTGCTTCCTGGACAAAATGGCTCAGGCGCTCCTGGCAGTGGACTAATCAA TGGCATCGTCAACCCGCCCCAACGCCCCCATCCCTTCTGGCCCAACTGGC AAAGCTGGGTGAACAGCTGGCGACCAACAAAGCCAGTTCCTAGCACTGAG GCTCCTGTCCAACCGCAGAATCCTCAGCAGCCGCAGAATCCTCAACAGCC TGGAAACAGCAATCCTGAGACCGCCGAAAGCGTAGAGCAAGCTGCTCCAG TACCACCAGCCAATGTACCAGCGTCCAACGAGAATGCCTCCGTTGAGGAC AGCAACAAAGCTTCCAGCGAGAAGTCCAAGGACAAGCCAAAGTCCGGTGA GGATCAATCCAAGGAGCAGGAACAGAAGAAGCCCAGCTCTGAGGAGAAAG AGAAGGACAGCAAGGAGAAGAACGACAAGGACAGCAAGGAGAAAAAGGAC AACGATAGCAAGGACAAGAAGGACAAGTCCAAGGAGGAGAAGGACAACGA GTCCCAGAAAGACAACGATGGCGACGACGAGCCGAGCTCCAAGGAGAAGA AGCAATACGTCAAGGATCTGATCAAGAAGCTGAAGAAGGGCGACGAGTGC GACGAGGACGACGTCTATCCGGATGTCCGTGATTGCCGCAAATACTACCG TTGCGAGGTCAAGAAGTCCGGCAAGCATAAGTTCGCCCACCTGCGTTGCG ACAAGAAGGAGCGATTCGACTGGCTTACCCAGTCCTGTGTGCCCAAGGAT GAGGCCCGTTGTCTCGAGAAATAGAACTGGCGTGGGATGCCACAATCAAC TGCACTTAAATATTGGCAATGATATTCTATCTCCATTTCCTGGGTCCTAT CTAATTTATTGCACTTAAACTTAAATATCTATCATTTTTTGTTTTCCTTA ATAAATCTTGAACTTTATGAAAATCTGGCAAA
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) Muc11A-RB FBtr0342741 4868
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) Muc11A-PA FBpp0088744 1040
Derived from OTHER transcripts	Name FlyBase ID Length (aa) Muc11A-PB FBpp0309609 1552
Comments
	Due to the repetitive nature of this gene multiple alignments are possible and this transcript structure is based on potential alignments and consensus splice GT/AG donor/acceptor sites.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_167319
Synonyms
	CG32656-RA Muc11A-RA
References ( 2 )
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]