A Database of Drosophila Genes & Genomes

FB2008_06, released July 3, 2008
 

Transcript Dmel\Pten-RA

General Information
Symbol Dmel\Pten-RA Species D. melanogaster
Annotation Symbol CG5671-RA FlyBase ID FBtr0089905
Feature type mRNA Associated gene Dmel\Pten
Created / Updated 2000-08-22/2004-06-05
Evidence Rank Weakly Supported Length (nt) 2537
Evidence Score 3
Map ( GBrowse ) detailed view FBtr0079978 FBtr0080086 FBtr0089902 FBtr0089900 FBtr0089901 FBtr0089903 FBtr0089904 FBtr0089905 FBtr0080079
hide cDNA Clones Consistent with the Transcript ( 2 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the
annotated transcript,
internally consistent
End(s) extend beyond
the annotated transcript,
internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the
annotated transcript,
internally consistent
End(s) extend beyond
the annotated transcript,
internally consistent
hide Sequence
AACACCCTGTGGATCTCACGCTTGATAAATTAATAATACATTTAATAGAG
CATGAGCGCTACTGTTTAACTTTTACACATAATTGAAAAGTTTTATTTGA
AATTTCGTGGCTTAGAGCAAAACATGTGATAGCTTTTTGAAATGCAGTAG
CCAGAACCTGCTCGTTTGTCAAAAAAGTGTGTCTACTCGGCGAGATAAAA
CAAAAAACAGTTGCCAAATCAGTCGCTATGTTAAGTAATTCGAAATTACT
GCTCGGTGTTTCTAAAACGGATTTTGATTTTGATTTTCACCCCTCGAAAA
TCGCCCCCTCAGCCAACGAACCCATTTAATTGCTCGAATTCGTATCGAAA
TCGCCGTGCGTTGGGCTTCAATAAAAGAACTCTGTTCTGTTAGCCAGTTA
CAATTAAAACCAGGACCATTTGACAACCAATCTGAATGTATTATGCCAAG
CGGAAGATTGTTATATTGTTTATCTTTGATAATATGCCGATACATAACGT
ACACTTTGCAATGGAGTAAATAGAAGACAAGCACTGGTTCCCAAATACAT
TTGAATGGATGCAGCTAATCTAATTTAAATAAAAAAGACAAGTCTTTAAA
CCTTAAAAATATGGCCAACACTATTTCGTTAATGTCCAACGTGATACGCA
ATGTAGTGAGTAAAAAACGTATACGATACAAAGAAAAAGGATACGATTTG
GATTTAACATACATTAATGATAACATAATTGCCATGGGCTATCCAGCACC
GGATAAACTAGAGGGCCTATTCAGAAACCGTCTGGAAGATGTCTTTAAGC
TATTGGAAGAGAATCATGCCCAGCATTACAAAATCTATAACCTATGCTCG
GAGCGTAGTTACGACGTTGCTAAATTTCGCGGGAGAGTAGCTGTTTATCC
GTTCGATGATCATAACCCTCCAACGATTGAGTTAATACAACGATTTTGCA
GTGATGTTGATATGTGGCTCAAGGAAGATTCGTCCAATGTTGTAGCCGTG
CACTGTAAAGCTGGAAAGGGCAGAACCGGTACCATGATCTGCGCATATTT
AGTGTTCAGTGGAATTAAAAAATCCGCCGACGAGGCATTAGCGTGGTATG
ATGAGAAGCGTACAAAGGACCGAAAAGGTGTGACAATCCCATCTCAGCGT
CGATATGTTCAGTATTTTTCCAAACTAGTTTGTTCAAGTGTTCCATATTC
GAAAGTAAGCCTTAACGTATGTGAAATACGCTTCTCGGAGTCCAGTTGTG
TGCAAAACTTAGGCATGGTAGAATGTTCAATATCTGTATTACACGACTCA
GCCACAGAAAATGCAAAGCCAGATAGACTGAAAACCTTGCCGATTGATTT
TCAAAAATCATTTGTTTTGACCATTAAACCATCAATACCAGTTTCCGGCG
ATGTAAAATTTGAACTCACAAAAAAATCCCCAGATAAAATCATTTGTCAC
TTTTGGCTAAATACGTTTTTTGTACGAAACTATTCACCTTGCGAGTCCGA
TGGAACAGTTAACAAATATATACACACTTTAAGCAAATCAGAAATCGATG
ATGTACATAAAGACAGTGAACATAAAAGATTTTCAGAAGAATTCAAGATT
TCAATCGTTTTTGAGGCAGAGAATTTTAGCAATGATGTTCAAGCTGAAGC
GTCCGAAAAAGAGAGAAACGAAAATGTTTTAAATTTCGAAAGATCAGACT
ATGACAGTTTGTCTCCAAACTGCTATGCCGAAAAAAAAGTCTTAACTGCG
ATCGTCAATGATAATACAACGAAAAGTCAAACAATAGAAACGTTGGATCA
TAAGGATATAGTTACTAAAATTCAATACGACACATCAACCAATTCAAAAA
ATACTTCGACTGCGTGCAAACGCAAACAGCCTAATAGCAAAACTCTTTTA
CCAAGCTTGAATGATTCCACAAAAGAGGAAATAAAACGAAATCATATATT
TAATCAACCGTCCATTAAGAAAACTGATTTAATCAAATGGCAGAATAGTG
AAGTTCATATCACCTCTGACACTCGAAGTATAAACGAAAATAAGAACATC
AATTACAATTCATACATCACATGTAAACAATCCTCTCCAAAATTCAACTG
TGGTACCGAAGATGGCGAGGAAGATTGGGAATCCGAATAATCACCCGAGA
CGATTTAAAAGACTTCTGGCTGAACGATCTCTTAATTTTGATGTATAAAA
CGAAGCCACCAGAACTGGATTTATATGTCCCCAAGACTTTTACGAGTATA
CTAGCAGAGACAGGCTTACACAGATCCACTTCCTTTCACGGGGAAACGAT
CGATTACAGCTGCGCTCTGCACATCTGTTTAGAATTTAATGTACATAGGT
GAATCAACATACCTGTAATCAATGCTTATTACGGACTTATAATTCTTGGT
GATTTAGCAAAGTAATTAAAATTGCTAAGTAATTGGCTAATCTATTCGAA
TTTGTAAATATACTGTATGATATTTATTTAAGTAGTTTTAACAATTATTT
TAAATAAACTCATGTACATTTTGTATTGTAGATTTCA
hide Other Products of this Gene
Other Transcripts
Name
FlyBase ID
Length (nt)
FBtr0089904
2324
FBtr0089902
1815
FBtr0089900
2137
FBtr0089901
2350
FBtr0089903
2509
 
Polypeptides
Derived from
THIS transcript
Name
FlyBase ID
Length (aa)
FBpp0088844
509
 
Derived from
OTHER transcripts
Name
FlyBase ID
Length (aa)
FBpp0088843
514
FBpp0088841
418
FBpp0088839
514
FBpp0088840
509
FBpp0088842
509
 
hide External Crossreferences
RefSeq - An integrated, non-redundant set of sequences
hide Synonyms
CG5671-RA
 
Pten-RA
 
hide References ( 3 )
Research paper
Goberdhan et al., 1999, Genes Dev. 13(24): 3244--3258
Drosophila tumor suppressor PTEN controls cell size and number by antagonizing the Chico/PI3-kinase signaling pathway. [FBrf0123020]
FlyBase analysis
FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome.
Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453]
FlyBase, 1996-, FlyBase inference based on genome sequence analysis.
FlyBase inference based on genome sequence analysis. [FBrf0104946]