Transcript Dmel\sdt-RE

General Information
Symbol	Dmel\sdt-RE	Species	D. melanogaster
Annotation Symbol	CG32717-RE	FlyBase ID	FBtr0089974
Feature type	mRNA	Associated gene	Dmel\sdt

Evidence Rank	Strongly Supported	Length (nt)	6490
Evidence Score	15

Map ( GBrowse )
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 68 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent	RE70031
End(s) extend beyond the annotated transcript, internally consistent	MIP10078
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	7988 8020 8082 20210 31083 33945 34016 43380 43428 44178 46259 57203 57270 102414 103892 103914 104167 105315 123247 144681 146913 150071 178474 193049 214281.7 214311.20 214351.21 214477.19 214533.22 273708 CK01.7B.H8 CK01.24D.F10 CK01.66D.A4 CK01.71A.D1 CK01.80A.D6 CK01.96A.D3 EK056413 EK105811 EK105833 EK105835 EK116807 EK133955 EK138208 EK140437 EK159522 EK165056 EK174424 EK177411 EK177620 EK186005 EK189108 EK226763 EK227128 EK244001 EK246213 EK249562 EK250923 EK255921 EK296262 EP02225 EP04011 EP04030 EP05821 FGM320G01 RH17925 RH44007
End(s) extend beyond the annotated transcript, internally consistent
Sequence
	ATTCTATGTTCGTACCGCGAGGTAAAAACGCGTGTGTGCCACAGCGAGAG TGCAACAAAAACAACAATAACACACACGACAACAAATACGCAGAGCGCGG CGACAATGTTTTAAATACGATGCGATACGAGAACGTGCAACTGCAATTTG CCGTTAGCTAAGCTGCACGATCGATTTGCAATAGTAGCAATAACAAAAAC AGCAACGCAGCAGAAATGTGTAAACCAAAAGGATAAACCAACAAAAAAAA ACAATATTTAGAAACCAAAAAAAAAAGTTGTAATAGAAAGTCAGACACAG AGAGGGAAAGACGCAGAAAAAGTGAGAAAGGGCGACAGAGATCGAACGGA TTACAGATATGCGCATCCTAAAGCAATGGAATCGCCGGCGCTCCGGATCG AGCATTGTTGTGCTGGATGGCGACGATTTGAAGCCATGTCTGCCGGATGA CTACATAAGCGGTCAGCATCATTTGAACCACCAGCAGCAGCTGCAACTGC AGCAGCAGCTGCAGCAGCAACATCCGCTCCAGCAGCAACACTATCGCACG CACTCGGGCGACATCAGGGAGATTGACCAGGAAATGTTGACCATGTTGTC CGTGAACCAAGATAACGGTCCACACCGTGAGATGGCCGTCGATTGTCCGG ACACGTTCATCGCACGCAACAAGACGCCACCCCGATATCCGCCACCCCGT CCACCACAGAAACACAAGAAAAGCACCAACACCACCACCACCACCACAAT CACAGCTTTGACTAACAATGATCATGCTAACAAAATGTTAATTGTTGCAT ATCATTCTTCACATCAACATGAACAACTACAACAACAACACCCATCAAAA ACATCAACAACAACAACAACAATTGCACTCGATGTGGCCACACAAAATTT GTACAATCAAAAACAACAAAACAAATTGGAACAAATCGAAAACTATGAAA ATTGCCTGCAATCGGAACGAAATGAACAACACGAACAACAATTTGAACAA CAGAAGCAACATCAAGCGACAACCGCAATGGCAGCAACACAGGTGGCACA ACAGCAGACGCCCAGCCACAAGTTGCAGGCAACATTGAGCAGCGATCCGA ATGGCAACAGCAATAGCAACAACAATAGCCACATAGTTGGCATCAGCAGC AGCAGCAGCAGCAACAACAGCAGCATCACCGATGATTTCCTGTGCGTTGT GGATGGCCTGTATCAGGGACGCAAGGACACGGCCTCGCCCTCATCGAGCG CCTTCGATGAGGTGATGAGCAAACATACCCTGGACTCCTTTGGCAGCATC GCCTATCGTCACCTGCACCAGCAGCATCAGGCGACGAGCAATGGCAACAG CAGCAGCAACACGAGCAATACCAACAGCAACACCAACAGCAACACCAACA GCAACAGCAACACCAATGGCAACACGAGCAACAACACAGCTGTTTCAACC AAAACGGCAACGGTGACCAAAACAGGCGTGAGCAGCAGCAACAGCAACAG CAACTCGCTGAACAGCAGCAACAGCTCGATGCACACGAGCAGCAGCAGCA GCGGTCACAGCAGCAACATAGCCAGTGCCACATCATCATCATCCGCCACC AGCAGCTCAACGGTGCCCGATGATCTGAGCCTGGCGCCACCCGGCTACGA GGTGAGCCAGCAGCAGCAGCAACAACATTTGGTTGCAACGCCCGTGACCA TGTTGCTGCCACCGATGGCCAAGCATCGCGAGCTGCCCGTTGACGTACCG GACAGCTTTATCGAGATGGTCAAGACCACGCCAAGATATCCGCCACCAGC TCATCTCTCCTCACGCGGATCGCTATTGTCGAACGGCAGCGCCTCCACCG CCCACACCACGCTCTCCTCGATGGGCGTGGCGCCTTCGCCTGTCACTGCA ACAGCAGCAGCAGCAGCATCAGCATCAGCAGCATGTGCAACCACTGCGGT TGCTGCTGCTGCGGTTTCTGGTGTTGCTGACGGCGATGCGAGGCGGGTGG CCGATGAGCTCAATGGGAATGCGAAGCCCGTACCGCCGCCACGTGATCAT CTGCGGGTGGAGAAGGATGGTCGGCTGGTCAATTGCTCACCCGCACCACA GCTGCCGGATCGCAGGGCGCCGGGAAATGCGAGCAGCGGCAGCAGCGGCG CCACAACGCATCCGCTGCAGCATCAGCAGATCGCCCAGATTGTTGAGCCC ACATTGGAGCAGCTGGACAGCATCAAGAAATACCAGGAGCAACTGCGCCG ACGACGCGAGGAGGAGGAGCGCATAGCGCAGCAAAATGAATTCCTGCGGA ACAGTCTTCGTGGCTCCAGGAAGCTGAAGGCGCTTCAGGATACGGCTACG CCCGGTAAAGCGGTTGCCCAGCAGCAGCAGCAGGCAACGCTGGCCACCCA GGTGGTTGGCGTGGAGAATGAGGCATATCTGCCCGACGAAGACCAGCCGC AGGCGGAACAGATCGATGGCTATGGCGAACTGATAGCGGCCCTTACCCGC CTGCAAAACCAGCTGAGCAAGAGCGGACTGAGCACGCTGGCGGGTCGCGT TTCGGCCGCCCACAGTGTCCTGGCCAGCGCCAGTGTGGCCCATGTCCTGG CCGCTCGCACCGCAGTACTGCAGCGACGACGTTCCCGCGTCTCTGGTCCA CTGCATCACAGTTCCCTCGGATTGCAGAAGGACATTGTGGAGCTGCTAAC GCAATCGAATACGGCGGCGGCCATCGAGCTGGGCAACCTGCTGACCAGCC ATGAAATGGAGGGTCTGCTACTGGCCCACGATCGCATTGCCAATCACACG GATGGCACGCCCTCGCCAACGCCCACGCCCACTCCGGCAATTGGAGCGGC GACGGGATCGACACTCAGCAGTCCGGTGGCTGGACCCAAGAGAAATCTAG GTATGGTGGTGCCACCGCCCGTGGTACCACCGCCACTGGCGCAACGCGGA GCAATGCCACTGCCTCGCGGGGAGTCGCCACCGCCGGTTCCCATGCCACC ACTGGCTACAATGCCCATGTCCATGCCCGTTAATCTGCCGATGAGTGCGT GCTTTGGCACGCTAAACGATCAGAACGACAACATTCGTATCATCCAGATC GAGAAGTCAACGGAGCCGCTGGGCGCCACAGTGCGCAACGAGGGTGAGGC GGTGGTCATCGGTAGGATTGTGCGTGGTGGAGCGGCGGAGAAGTCGGGAC TGTTGCACGAAGGTGATGAGATACTGGAGGTCAACGGTCAGGAGTTGCGT GGCAAGACGGTGAACGAAGTGTGCGCCCTGTTGGGCGCCATGCAAGGCAC CCTGACCTTCCTGATCGTCCCAGCGGGTAGTCCACCGTCCGTCGGCGTGA TGGGCGGAACAACGGGCAGTCAACTGGCCGGGTTGGGTGGAGCACATCGT GACACCGCCGTGTTGCACGTACGGGCGCATTTCGACTACGATCCAGAGGA CGATCTGTATATACCCTGCCGGGAGCTGGGCATCAGCTTCCAGAAGGGCG ATGTACTGCACGTGATTAGCCGCGAGGATCCCAACTGGTGGCAGGCGTAT CGCGAGGGCGAGGAGGACCAGACGCTGGCCGGTCTTATTCCTAGTCAGTC GTTCCAGCATCAGCGCGAGACCATGAAGCTGGCCATTGCGGAGGAGGCGG GTCTGGCGCGATCCCGCGGTAAGGACGGATCGGGCAGCAAAGGAGCCACG CTCCTGTGTGCGCGCAAGGGTCGCAAAAAGAAGAAGAAGGCCAGCTCCGA GGCGGGATATCCTTTATACGCCACCACGGCGCCGGATGAAACGGATCCGG AGGAGATACTCACCTACGAGGAGGTGGCCTTGTACTATCCCCGCGCTACC CACAAGCGGCCCATCGTCCTCATCGGCCCGCCCAACATTGGAAGACATGA GTTGCGCCAACGTCTGATGGCCGACTCGGAGCGTTTCTCCGCCGCAGTGC CACACACATCACGAGCCCGCAGGGAGGGCGAAGTGCCCGGAGTGGACTAC CACTTCATCACGCGACAGGCCTTTGAGGCGGATATTTTGGCGCGCCGCTT TGTGGAGCACGGTGAATATGAGAAGGCCTACTACGGCACATCACTGGAGG CCATACGCACGGTGGTGGCCAGCGGCAAGATCTGTGTGCTCAACCTGCAT CCGCAGAGCCTTAAGCTGCTGCGCGCCTCTGACCTCAAGCCGTACGTGGT GCTGGTGGCGCCGCCCAGCTTGGACAAGCTGCGCCAAAAGAAGCTGCGCA ACGGCGAACCCTTCAAGGAGGAAGAGCTCAAAGACATCATTGCCACGGCC AGGGATATGGAGGCCCGTTGGGGTCACCTATTCGACATGATCATAATCAA CAACGACACGGAGCGCGCCTACCACCAACTGCTGGCCGAGATCAACTCGC TGGAACGCGAGCCCCAATGGGTGCCCGCCCAGTGGGTGCACAACAATCGC GACGAGTCATAATGGGTTCTAAAGCACCCGCAACCACCACACTACCATCT TCCCTAGGATCCATCAACACCCAAGAAATGAATAGCAAACCCAAACTCTT TGTAAATACAATTTTCAATTGAGCCATGAAGCGGAGAGCAGGATCGATTC CAGTCCAGTAGTTCGGTTTGCCTGCCGATGCGATTAATCCCAACCCCTCC AATATTATATATAAATATATATATATTTATACTATTCGTTGCATATGTGC ATTTTAGTCTTAGAGAGAGATCGAGTTTTAATTGTGTGTACTCCTGTTTT AAAAGCATTCCAACCTCTTTATGTATGTTCACAAAATTTGTTGTTCGATT AATCGATTTCGGGAATGCCACAGAGGAAATGGTGATGCTGAAATCAGTGA TTTCAAAAACCATATTGCTTCTTGTGGCACTTCCGTTTTCCTCTTTTTTT TTACCACTACCACTAACTTATATACTGTAAAAGAATGTTTTTTTTTTTTT TGTATTTAAATTAAGCTTGGACACTTCCTTAATTTCAAAGGGCAAATTGA AATTGTAAAATAACGAATCAGCAAAGGAAGGCCAGAATCGATATGATAGT ACCCCTAGTACCCAATAAAATGTGTAATAATACCCATAAGCGACTCCGAA TGTTAACAGAGCCAGAACAATCCGTAGGCAGCTGTGCGAGGGGAGATCGA TCCGTCGGATATAGATTCATATTCATCTTCAGATTCAAATTCAAAAGCAG AATCAGAAACATACAGAGAAACCGAATCAGAAGCGCAGATACAGATGCAG ATGCAAGTGTTGCAATTACGTAATCTATTTACTTTATAAAATATATACTA TACGGATATACATACACATAAATTATAAATCGAAGCGTACTTAATACAAT TAATTTTTAACAAAACGAATGCAAGAGCAAAGTGAAAACTAAGAAATAAA ACCGTTCATAAGAGAGAAACAACAAAATCAGTAAGTCATTGCCAAAAAAA AAAAAAACAAGAAAAACGAGAAAAACAAAAAGAGTTAAATAAATGAGAGT GTTAGATGAGGAGAGTTAGGAGAATCACTTAGAAAAAAACCACTCCACGA GCGAAATTGTTAAAAACAAAAACGGAAACGGAAAAACAAAATACTTAGCC AACTTTAAGCACTGTAAGATAATGGAAAACCCAATAAACGAATGCAAATA GTAAGCCGGAAAGAAAATGAACAGGCTAAGGTATCCGAAACAAAAGCAAA AACAAAAGGAAAATCGAAAAACGAAAAACAAAGTAATTCCCAAGTAAATG TTGTTGTAATTAATTATTTAAACCAATTCGTCTAGAGAGAGAACAGGGAT GGCAGGGCGGCAGATCCAGTTGGTTTCAATTCCAACCACAACTAACTAAC TAGATATACCGTGCATATAGAGATCTATACAAATTCCATTGAGCAGCAGC TAAAAACCAGAATTTTATATTAAAAGAAGTGTGGGTCAAGTAAAATAGCA AACTATGTTACGCAATGTTGAACACTTGAAAGTTTCTAAAAGCGAATGAT ATCTAATATACCTTAAAATCTACATATACGGTGTCCCGCTTGCCATTTCC ATTTCGATCCATTTGCTAGATGGCTGCACTTGCCAGATTATCCCTGTATC CTTTGAGTCCTCGAGATCATATTTCGATCTGATGGACTAATAATGGATTC TTGGTAGAGTTTGAATTGAAATCGGAAATGGTAGCGGGGCAAGTAATAAT AAAATTCAAAAAACAATTTTTTTTTTGTAGTCCACAAGGTATAAAAAAAT GTGTGTGCAGTAAATCTGTTTAAGTTTTTATTTATGTATGTGTGTGGTGT AGCAAAACTAAACTAAATACGAAACAAATACCTAAAGAAAAACAAAGCGG ATTGCAAAATAGGCACGGTTTAATAGCCATTGTACGAAATTAACGACATT TATGAGTAACCCTAACGCAAAAATGCGGACAAAGTCAGATGAAATAACAA TATTAATAATAATAAAAAAAATCGACAAACCAAGAAATAT
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) sdt-RB FBtr0089978 6828 sdt-RD FBtr0089975 3838 sdt-RF FBtr0100375 4482 sdt-RG FBtr0100376 8462 sdt-RH FBtr0111034 4017 sdt-RI FBtr0308217 5228 sdt-RJ FBtr0308218 6406 sdt-RK FBtr0308219 3790 sdt-RL FBtr0308220 7745 sdt-RM FBtr0333720 9152 sdt-RN FBtr0333721 5650 sdt-RO FBtr0340141 7220 sdt-RP FBtr0340142 6968
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) sdt-PE FBpp0088912 1367
Derived from OTHER transcripts	Name FlyBase ID Length (aa) sdt-PB FBpp0088916 1292 sdt-PD FBpp0088913 879 sdt-PF FBpp0099784 859 sdt-PG FBpp0111740 2020 sdt-PH FBpp0110333 934 sdt-PI FBpp0300537 1269 sdt-PJ FBpp0300538 1527 sdt-PK FBpp0300539 879 sdt-PL FBpp0300540 1941 sdt-PM FBpp0305869 1901 sdt-PN FBpp0305870 1292 sdt-PO FBpp0309127 1606 sdt-PP FBpp0309128 1173
Comments
	Extended 3' UTR based on RNA-Seq and/or EST data. Transcript supported by FBrf0141669 Transcript terminates at site supported by polyadenylated cDNA.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_206653
Synonyms
	CG32717-RE sdt2 sdt-RE
References ( 3 )
FlyBase analysis	FlyBase Genome Annotators, 2005, Changes affecting gene model number or type in release 4.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 4.2 of the annotated D.melanogaster genome. [FBrf0182792] FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]