Transcript Dmel\klar-RB

General Information
Symbol	Dmel\klar-RB	Species	D. melanogaster
Annotation Symbol	CG17046-RB	FlyBase ID	FBtr0110818
Feature type	mRNA	Associated gene	Dmel\klar

Evidence Rank	Strongly Supported	Length (nt)	8240
Evidence Score	11

Map ( GBrowse )
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 64 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent	LD36052
End(s) extend beyond the annotated transcript, internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	12635 39704 44718 60123 74282 121463 148328 175236 180630 214279.27 214385.28 274336 277157 527243 561823 569116 AT11467 CK01.19B.D6 CK01.105D.F1 CK01.117A.E2 CK01.123A.E11 Dmel_neb_012026_0439_1265 Dmel_neb_013434_0075_1674 Dmel_neb_013589_0608_0946 EK018147 EK093620 EK113759 EK156436 EK159848 EK168315 EK241351 EK254234 EK279222 EK301727 EK304121 EN07509 EN07541 EN13214 EN14553 EP02459 EP03252 EP13943 FGH106G02 GH01769 GH07261 GH14703 GH22034 GH22663 GM02132 GM20077 GM22361 HL05989 IP04291 LD13537 LD25931 LD43547 SD02151 SD10239 SD12459 SD27948
End(s) extend beyond the annotated transcript, internally consistent	561931 EC01179 SD11423
Sequence
	CCGAGGTGTGCGGCGCGCATTGGGCAGACTGGAGTGAACTAAGTAAATCT GCAGCGTTCTAATTTAATTGCGCGATGAGCGCGTAAAAACACACCTGCGT AGCGCTGCAATAAAACCAATGTAGATTTTTGTTTATATGTTCGCGTTTCC ATCGTATTTTTCGAGTCTTATTCGTTTTAATTGTTAGTGCTCGTACGCTA AGTGAATTGCTAGCAACTTGGGGCTAAAAGTGCCAAAAAGAGCCAGAATC GAAAAGAAGCGGCTAAAGAGGAATAAGCGAAAAGGAAGCAACGAAAACGG TGTTTTGCTCTCTTTCTCCTCTCTCATCCTCGCCATGTGTGTGCGTGTGC AAATGTGTGTGTTGGCGTCGCTAAAAAAGTGCATGTGAAGATTAGGAAAA TAATAAGGAAGGCAACGAAAAGTAAAATAAAATTTGATGTACAAAATACG CAAATTGGTGACAAACAATGTACAAGTGGCATACATGAAATAAAGTTTTA TGCAAAAAAAACAAAATCGACTGCAGTGCGTGCACTTGTGTGTATGTGCC GCTGCATATGTGTATGTGTGCAGTGTGGAAATAAAGCAAGAGAGAAAAAA AAACTGTTTGCAGCCGGGGTACAAATTCCAATTGGAGTCTCAAGGAGCAT AAATTCCCATTCGACGCATGCGTGGCTGCTAAAAAAAGCAACCGAAAGTG AATTGAATGGCATCGAATAGATGGAATGGATATGTGAATGAATTTCGACT TTCGCACAATTTGCGCGCTCTTCACACTCGATTATTGGAATCGAATTAGA TACGCAAACTAACCGACATTTTATCAAAATAACGAAACAAGTATTTTGCA TAAAAACGAACGGAAATCGAAAGGAACGCCCTGAAGGTCATTGCCAGGGA GCGGAACGCCGGCAACGAAACGGGAAACAATGGAAATAAGAGGAAGCCAG GCAGACATGCAAATATTGGGCGACTTTTGAGGGGTTCGATTAACATAACT CGCTCTCTAAATAAAACATTGTACATCCCCCCATGCACACATGGTTAATA CAGCCAAATAAAGTTGGAAAACAATGGAAATGCAACAGGAAAACGAGACG GGAAGAGAAGGGGTAATCCCGAACTCGGAGAAAGAAGTAGCGTTGATAAG TAACCAAGAGACTGAAAAAGCGGCCATGATTAGTGGTGGCAAAGAAGGTT CGGTAAGGGATTTGGAGTCCCCAAACGAAACCGCCACCACCCAAAAAATA GAACACACAACGAAACCACTTAAATTGGATGGCATTTTTGCCATGCCAGC CACTCCGCCGAATAGGGCCGGACTAACAACAAAATCGGCCAGCAGTAGCC GTAGCAGTTCCCTCAAAAAGCAGAGACGAGGATCCAGAGGAAGTGCCAAT TTGAATGTAGCGGGAACGGGTGATGGAGCACCCAAAAGAAGCGCCCCCGG CGGTGGTCAGCTAAACTATGGCACCAATAGTGTTGGAAACGACCTTATGA AGCAATCGCAGTCCATGACGTCACTGAAGGCCTCTAATGAGGAACAGCAG GAGAGTCGTGACGTCATCCAGGCCAAACTTCACTTGGAACGTCCCTACAA CAGCCTCAAGAAAAATTCGCATAGCAATAAAATGCACCGTTATTCGTGGG GAAGCGGAAACAGTCAATGCAGTTCCACCAGTCTGCACAGCAGCGCCACC TTGGGTCTGGGTTCGTCTGGCAAAGACGACCTCTGGGCGGCCATTCAAAC GAACTACAACTACATTATGGACACGAACCTTTTGGACACTTGCAAGGAGG CGCGCTGTGAGATAGAGGGCGCTGCCACGGTGTTGGAGAAATCCAGTGAA TGTTCCTTTAAGATGCTCGATGAGACCCAACGACCGGAGGGTCTTTGTGA GGATCCCAAGGAGTTGCGGCGTTGGCTGCGCGAAATGGAGAATAAATTGG AGAGTTCGCCGACAATCACAGAGCTGACTTTGTTTGGCAACGCGGAATTG CAGCGCCATCTAGCAGTACACTCGGTGTTGTACCATGAAATTGCATCACA CGCTCGAGTGGTGAGCTCTTGCATTCGAGCCGCCGAAAAGGAACAGCAAC TCCAACAGCAGCAGCAACTGTCGAGTCAGCAACCCGCCTCATTGACCAGC AACTGCTCCAGTGAGTCAACCAGCGAATCGGCCACAAAGTCGAGCAGCCT GAGCAGTGGTTTCGCTTCCGATCCGGTGACCACACCCATTGGAACCGCAG CAGCGGCCCCGCCGTCAAGTAGCACCCACCCATCCAAGAAGGGGGAGGGC AACTTGGAGCGACTTAGGGATCGCTACCATCTGTTGTATCTGAAGGCGTT CGAACTGCAATTGTGCCTGGATAATCTGCTCAGGAAACGCAGTTCCGCAG CGAATGGTTTGGATGACGACGAGGACGAAGAGGAGGACACCGAAGACGAT TCCTTTGGCTACGAGGGCGAAGCCACCGAGGACGATCTGAACGAGGTCAA CTCGGATCTCGATCTAGAGAACAGCGAGTCCAAGTCGGCCACCCCCGCGG AACTTATTCTCCAGCGCTGTCAGATTGCAGCTACCCAGATTGTGTGCGGA CTGGATGAGACCCAATCCCAGTCGCGGTCACAGCAAGTCCCATCCCAAGC GAAGTCGCCGTCAGCGGATCAGCCACGCGATTGTCTTGCACCTCAAAAGA TACTGAAATCGGCTGATGCCTCAACGGATGACGACGACGAAGGTTGGCTC TACACGGCGACAGCAGCAGCAACATTGGAAGTTGCAACAGCAGCAACTGC AGCACCGACTGCCGCAGCAGCAACATCGAGTGTGGATGGTCTGCAGTCCA CGGCCGTCTCCTCGACTACGGCCACGGGTGGACCACTCCCGCCCAGCGAC GACTCTGATAAGGAGAACAAGGTGGCTCTGGTCAGCGCCACGACAATCAC GGCGGCAGCAACCGCAACTGCAACATCCATTGCAACACTGCACAGCAGCA ACTACGACAGCAGCAGCGCCTGTTCCTCCTCCAATTCAAATTCGAATTCG AACTCCAACTCGAACGGCAGGCTCACGGAGACCTCAGCCACCTCGCGAGT AACCCAGCTACAGATGCAAATCCACTCGCAATCGCAGTCGCAGTCACAGA TGGAGCTCCAAATCAATGGCAATGCCATCGACGGCAGACACATCATTAGC AACAACAATTGCTACAGCAGCATGCAACATCAGCCGCAAAACAACAACGA GGGTGAGGCAGCCGAGGATCTGGCCAAGATCAAGATGGGTGACGATGAAG CAGCTGCTGATATGGCAAATGGAAACGCCACCAAATCTCAGCAGATGAGC AACGGTGTGTACAGTCGCGCGGACTCTTGCAACTTCACCGTTTGGGCGGC AGAAACTGTAGCCAGTTGCCACTTGCCCCCGAGATCGCCGGCCAAATCGG CCAAGTCCTCGAAATCCCAGGCCAGCAATGCCACCGTGTCTGGATCCACG CTTGTTTCCCCAGTCAAGGGCAAGGTCTCGCATGATTCAATCAAGCAGTT GGTGCTGGAAGCCGAGCATTTGGTGCGCGACGCCCAAGAGACCGCACTGA AGACGCCAACCAAGCAGAAACATTCCATCATTAAGATCTCGTCGACGGTC AAGAAGCGCGAGGTCACTATGCCCCATCCCATCAAGCAGCGTGTGGAGGA ATGGCTGGAGCACCAGCCCTCGACCCCACAGCTGCTGACCCGGAGCCACA CGCACGAGCTCCTGCCCAGCTGCAAGCCAGATGACTGTGAGGCCTCCGGA GAAGCATCCGAAACAGACTCGGTGCCCCAAGCTGGAGCAGGAGTAAACGG AGGAGCACCGAATGGTGCGGGATCGGATACATCGGAGGGCTTCACCGATT CCATTGCCACATGTATGCAAACGAGCACGAATTCCTATGGGAATTCCACG GAGAGAATCGGTGGATCGGCTGAACCCATTGGACAGCCCGTCACGCCTTT GGGCTTTGGCAGCAGCAACCAGAGCCTGAATGTAAAGATTGTAAAGCGAT CGCAAACGCGTCGCAAGTCGGAGAGACCATGGTCGGTCTCGTGTCTGTCC CAGTTGACTACGGATGCAGCCCAGTTAACCACGGCCCGGATAGTGGAAAA CTCTCCGTCCGGTCTGGCCAGTCACTCGATCAGTGAGAGTGCCCTGGACT CGCTTTCGCCAGGACCAAGACCGCGGGCAGCTTCTTCCTCGGGAACGGGA AGCAATGCAGCCAAGAAGGCGGATAGCAAGGGCTCATTGAGGAGGAGGAA GGCCAGGAAGAAGCGCATTTCGGCCGCATCGGCTGGCAGGAAATCTGATT CAGGTTCCGAACTGGGTGGAGATCTCACCCAGACACTGATGAAGTCCTGC GAGTCCATGTCCTCGCAGCAGCTGCAGGAGTTCACCAATGCCCTTCTGAG CATTCAAAAAGGCGCAGTAGTTGCTCCTTTGAGTCCCAAGGGCGACGTTT CTGGAGTACCTTCACTGGCCGATGGCGAGGGAGGGGAAACCCAGCTGATG CTACCCAAGTTCCGGGTGGGCTCCTTCACCACAGCTGGCCTATTGGCTAC TGATACGAGGTTAGGCGCTTTAGCAGCCCTCTCAAACTACATGAACGAGG ACGAACAACAAGCAGAACTCAGCACTGAGGACCATCATAGCAGCATCTCG GAGACGGCGTGGGACAACTACCAAGAGAAATACAACTCGGAGAACTATTC CGAGGGCTTTGATTCAGATGCGGCCCGGCGTCTCTTGGAATTCGGCGACG ACTATCGCAATTTCATCGACTCGCAATCGGACTGCTGCAGTTCTCTGTCG GCGGCCAACAATCTGGACTCGTTCTCGCCGCCGCGCATGGACTCACTGCA GAAGCACGAGCTGAAGACCCTCCATATCAACCAGGACACAATCACCAGCA CCGTGGACCACGCCCGCCGCCAGCGCGCCCTTGAACTGCAGTACGAGCGT CGTCGCAAGACCCTGGAAGTTCGACGAAAGTCTTGCCAAGACATGGATGA GAGCCTGATGGCTAGTCCCCAGTCGGATCAACAGCAGCAGCAATTGCAGG TCACGCCTTCGTTGTCTGCCTCCGCCACCGCCCTAATGACCACGCCCAAG ATTCAGTCGACCAGCCACCAGATTAGCCATCGCGCAGAATCTGTGGGACG CAAGTTGGATTTCGGCGGAATGAGCCACTCCGCTCAGTCCCTGCTGCGTC GCACCTCGGAGAGCGATACTTCAACCAGGAGACGACGCACTGTGACGGCG GACGAAAGAAGACGCTCCTCCCGCAACCTGGAGAAGTGCATCAAACTTAT TCCAGCTACCACTTCCTCGTCGAGTGGCTCGGACTCCGAGGACGGAGAGC AGGAGATGCGATCCCTGCTGCAGCAGAGCCGCGACAGGCTGGACGACACC AGAGCCCTGAAGATCAGATGCCATCTGCTTAGACCAGAGGATTATAACGA GATCATCAACACTTGCCGCGACAACATTCGCTGCCTGGAGGCCGTGCTGC GCGGTCCGCCCGGCACCGTGTTGTCCAACCACTGCGCTGGCCAGACAAAA GATCTGCTCGGCGCCTGGGAGGATCTACTTAGCTGGAGCGAGAATGCCTC CGCTGCCCGCAAATTGCAGCAGGAGATGAGTGTGTTGAAGAGCTCGCTGC AGCGCCTGGGAGACAAGCCAACTCCAGAGCTCCTCGATACGGAGCCGGCC ATCCAAATAGCAGTGGAGGCGCTCAAGTTGGAGCAGACGCAACTGACCAG CTATAGGACCAACATGCTGCGTCTTAACGCCTCCGTCCACAGTTGGCTTA CCAAGCAGGAGCGGCGACTGCAGAGCGCCTTGGAGGAACAGGAGCAGCAA CAGGAGTCCGAACAACTCAAGCAGCAAAAACTTGTTGAAGAGGAGAAGGG AGCTGACGTTCAGAAGGAGCTGGCGTCTACCGGAGCAGTGGCCATCACGG TCACCGACAGCAATGGTAATCAGGTGGAGGCACTAGCCACAGGAGAAGCC TCCACCTCCACGCCAGCCTGGGATGTGCACACGCTGATGTCATCGGAGCA GGAGTTCCATAAGCATCTGAAGAACGAAGTGAGCGACATGTACAGTTCCT GGGATGAGGCGGATGCCAGAATCAACACGCAACTGGAAATGCTTACCAAC TCGCTTATTGCCTGGAGGCAGTTGGAGTCCGGTTTGAGTGAGTTCCAATT GGCTTTGGGCCAAGATAGGGGCACTCTGAAGGGTCTTGAAGGAGCTCTGG ACAAGGGACAAGCCACACCAGTCGAGCTGGCCCAGAATGTAAAACTGGTG GCCAAGCTGCTGTCCGAAAAGGTTCACGTAAGCCAGGAGCAACTTTTGGC CGTCCAGCAGCACCTGGACCCCAACCACATCTACCACATTACGAAGTTTA CAGCCTCAAATGGCTCGCTATCAGATTCCGGCATCTCTGATGGAGGAGCT ACTTCTGATGGTGGCCTGTCCGAGAGGGAGCGACGACTGGGAGTTCTTCG ACGCCTAGCAAAGCAGTTGGAACTAGCTCTGGCGCCGGGAAGCGAAGCCA TGCGTTCTATTGCTGCCCGAATGGAAAGTGCCGAGGCCGACCTGAAGCAC CTGCAGAACACCTGTAGAGACTTAATTGTTCGCACTGCAGCTAGCCACCA GCAGAAGCAGCAGATCCAGCAAAATCAGACCCAGCAGGTGTCACCGAAGG CCAATGGACACATTAAGAAGCAGGCCGCAAAGGGCAAGGCAGAACCCCAG TCGCCTGGCAGACGTGGTAAAGGAGCTCGAAAGGCGCGTCAGGCCAAGAA GGCTGGAGAGGATCAGCAAGTAGAGGAGCCAAGTCTCAGCCCAGAACAGC AGAAGATGGTCCTGAAGCAACTCAAGACCTTGACAAGTGGCGATGGTGGG GACGACCCCTCTGACGATCCCTCGTTGCTCTTCAACCTGGAAAGCTCCGA GGAAGATGGAGAGGGAGCGGATCCTGCACAGACCTCTAAGCGAGGGTGGG CGTGGCGCATCGCGAGGGCGGCAGTGCCTATGCAGGTGGCCCTGTTCACA ATCTTCTGCGCTGCCTGCCTGATGCAACCCAACTGCTGCGACAATCTGAA CAACCTGTCCATGAGCTTCACGCCGCAGCTCCGCTATATCCGTGGACCAC CTCCGATCTGAGGACAGAGCGCGACTAATTAAGCAGGCCGCTAATCGTTG TAGGTTACCGTTACGTTATGTTAAGGCATTTAACAGCTGTAACTAGAGTT AACCAGCGCAACCAGCCACTTAGGCAGAGCCACTAAGAGCTCGCCTGTGG CGCGCGTTTTCCGCGCTCGAGGTTTTACAATCCCGAACAGAGCGCTCTCC TCCGAAAGGTGCGACACCCAGAGGCAGCCCAATTTTATATGTCTAATTTA GGTAGCGAGCGCGAAAGGAACGCAATTTATAGTAAGGATGTATTTGTTAT TTCGGTTAATTTCCTACGAGTTTAGGTTGCTGTTCGATTGAACGCTGAAT ATGTACTTAGGCGAGGAGCAGACGATGCCCAGCCACGTGTAAACTGCCGC ATAAAGGAACAAAGGGGCGGATCGTCCCCCAGATTCTTACCCAGTAAATA TGATACAAACACAATGATCAATTGAGTGGCGTTTTTGTATACTTTTTTGT TTGAAAAACACTAAAGTGCCTACAAATGCGAACTGTGAACGAGGAGCTAC CAGCAGATGACAAAGGATCCGTCGAGGAGTCCAAACGAGAGTATGAATCC AAGGCACCGAAGCAAACAGAAGCTAAAAAGCCAACAGCACTAAGGAGCTA GCAATGGAGCTCACCAGAACAGCGATGAAGAATCAGAGTTTATATTTTTA TACGCAACGCAACTATACACAATCAGTGCGGAGACAACGAATCTTCAGCC AACACACATCATACGTTTTATGTCTATTATATTAATAGGATAAACCTTAC ACTTATTTTGCAAGAAAACAAAAATTCAACAAAAAAAAAAAAAACGAAAA TATCTCTTAGGTTCGTGTTTGGAATTCCTAGACTTAGTTTATGGTTTACT CACTCCTGGCAGATGATCATTGTAATATACTTATAAGGTTTATACTATAC TTTGTGCGTTTTCAAAACTTTCACTTGGCATTAAAAATACAAAACAGAAA ATATCATTTATACACAAAAAAACATTAAAGAAAAAGTATT
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) klar-RA FBtr0072565 8681 klar-RC FBtr0112807 3032 klar-RD FBtr0112808 6842 klar-RE FBtr0333850 8617 klar-RF FBtr0333851 7507 klar-RG FBtr0333852 4934
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) klar-PB FBpp0110115 2045
Derived from OTHER transcripts	Name FlyBase ID Length (aa) klar-PA FBpp0072464 2262 klar-PC FBpp0111719 567 klar-PD FBpp0111720 1823 klar-PE FBpp0305983 2272 klar-PF FBpp0305984 1636 klar-PG FBpp0305985 1180
Comments
	Extended 3' UTR based on RNA-Seq and/or EST data.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_001043111
Synonyms
	klar-RB
References ( 1 )
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453]