Transcript Dmel\Hr46-RD

General Information
Symbol	Dmel\Hr46-RD	Species	D. melanogaster
Annotation Symbol	CG33183-RD	FlyBase ID	FBtr0112799
Feature type	mRNA	Associated gene	Dmel\Hr46

Evidence Rank	Weakly Supported	Length (nt)	4233
Evidence Score	3

Map ( GBrowse )
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 64 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	19325 21119 29205 40554 64601 69271 77287 81563 83819 144324 165316 172453 214257.35 214449.37 281580 CK01.11C.C10 CK01.29D.F7 CK01.30B.E4 CK01.54B.D11 CK01.76A.C8 CK01.78D.H2 CK01.84A.A8 CK01.86B.E12 CK01.86B.G12 CK01.93C.D5 CK01.109D.D12 CK01.128D.H12 CK01.145B.D6 EC05801 EC23201 EC29501 EK026316 EK044516 EK059408 EK059444 EK066902 EK066936 EK068250 EK068258 EK072915 EK099764 EK102706 EK113708 EK119447 EK135414 EK153639 EK160303 EK192947 EK196327 EK210655 EK218449 EK227602 EK250722 EK256804 EK269856 EK273227 EK281407 EP12129 EP14246 IP15760 RP004225837 RP004248105 RP004471381 RP004526447
End(s) extend beyond the annotated transcript, internally consistent
Sequence
	AGTGTGCAATCGTTTGTCCCCACGTCCAGTCCAGTCCACTCGGATTCCGG GCTCTCTCATCGGATCGCTACCAGTCCCGATTACGCTTGCTCTCCTTTCT GATCCGTTCCACTCCGCCGGCTTCATCATCGCCTTCGCCGGCTAACTTCG CCGTTTGAAAACTATTTGATCCGAGAACAATACTGGGACTCGAACTAATT CGCCGATTTTACGATCGCTATTATGATCTCATGGCCGGGAGATGAGTTCA AGGCCTTGACACTGATCTGATCCGATTTGGGTGTCTGAACGAAAGTCCAT GTCCATTGATGAGATTGCTTAACCCGGATAACATGCCCAGCACCATCAGA GCTCAAATTGAGATAATTCCATGCAAAGTCTGCGGCGACAAGTCATCCGG CGTGCATTACGGAGTGATCACCTGCGAGGGCTGCAAGGGATTCTTTCGAA GATCGCAGAGCTCCGTGGTCAACTACCAGTGTCCGCGCAACAAGCAATGT GTGGTGGACCGTGTTAATCGCAACCGATGTCAATATTGTAGACTGCAAAA GTGCCTAAAACTGGGAATGAGCCGTGATGCTGTAAAGTTCGGCAGGATGT CCAAGAAGCAGCGCGAGAAGGTCGAGGACGAGGTACGCTTCCATCGGGCC CAGATGCGGGCACAAAGCGACGCGGCACCGGATAGCTCCGTATACGACAC ACAGACGCCCTCGAGCAGCGACCAGCTGCATCACAACAATTACAACAGCG GCGGCTACTCCAACAACGAGGTGGGCTACGGCAGTCCCTACGGATACTCG GCCTCCGTGACGCCACAGCAGACCATGCAGTACGACATCTCGGCGGACTA CGTGGACAGCACCACCTACGAGCCGCGCAGTACAATAATCGATCCCGAAT TTATTAGTCACGCGGATGGCGATATCAACGATGTGCTGATCAAGACGCTG GCGGAGGCGCATGCCAACACAAATACCAAACTGGAAGCTGTGCACGACAT GTTCCGAAAGCAGCCGGATGTGTCGCGCATTCTCTACTACAAGAATCTGG GCCAAGAGGAACTCTGGCTGGACTGCGCCGAGAAGCTTACACAAATGATA CAGAACATAATCGAATTTGCTAAGCTCATACCGGGATTCATGCGCCTAAG TCAGGACGATCAGATATTACTGCTGAAGACGGGCTCCTTTGAGCTGGCGA TTGTTCGCATGTCCAGACTGCTTGATCTCTCACAGAACGCGGTTCTCTAC GGCGACGTGATGCTGCCCCAGGAGGCGTTCTACACATCCGACTCGGAAGA GATGCGTCTGGTGTCGCGCATCTTCCAAACGGCCAAGTCGATAGCCGAAC TCAAACTGACTGAAACCGAACTGGCGCTGTATCAGAGCTTAGTGCTGCTC TGGCCAGAACGCAATGGAGTGCGTGGTAATACGGAAATACAGAGGCTTTT CAATCTGAGCATGAATGCGATCCGGCAGGAGCTGGAAACGAATCATGCGC CGCTCAAGGGCGATGTCACCGTGCTGGACACACTGCTGAACAATATACCC AATTTCCGCGATATTTCCATCTTGCACATGGAATCGCTGAGCAAGTTCAA GCTGCAGCACCCGAATGTCGTTTTTCCGGCGCTGTACAAGGAGCTGTTCT CGATAGATTCGCAGCAGGACCTGACATAACAAGAGCAGCAGCCGTTCCTG GAGACGACCGCGGACGATGTTGCCGAGGATGCGGCTGCCGCCGGATGTGT CCTGCCGCCGGTGGCGCCCCCTGCCGGGCAGCAACCAGCGCTGCTCGAGG ACTGAGGGCCGCAGGATGTGGCAACAATAATTATTTGAGTAAACACTGCA CTGCGCATGCAGCAGATACAAGAACTTTATCATGATTTAAGCTAGCATAC AACCAAGGATGTGATCCTCGCCAAGGACTCACTTAAAAAGAACTCTATCT ATATACATATATATATTATATATGACAGAGCGGATGACGCAAAGGGAAGG GAAAATATTTCAAAAATATTGTTAACTCAGTTAAGACTTTTGCTTCGTAG AGAACCGAAACCGAAACCGATTGCATTTCGAGCAAGGGGCATCAAACTGA TTTTCGAGGTTATACTATACATATATACACACAAACACACACACACACAT ATATATATATGTAACTTCCAAACTTTCATATCCTGGCCCGAGCAGATCAG ATCGTCTAAGTACTTAAAACCAAGCGAAATTCTCTACACCGCACAACCCA GGACCCGTAGACCCCAATAATTCAGTTCGGTTAGTGTTAACCCCAGAAAG CCCGATTCCGATCCCGCCTAGGTTGTCTTTGCCTTACGTTGTAACTAAAG TATGTGTATTATATATACAGCAAATGTATGTATAACTATGTCGTATCGGT TATATGCCTAACAACATTATTTTTTGTAAACAACAAAATCGAATATCTCG GAAAATGTGTTCTTATAATTATATTGATTAATGCAATTACAATATATTTA CAATTTACCGTTACGTTTTTACATTATACATAAGACGCAAGAGAAGGAAA CGGAAGTTTAAGGATTAGAAAGCTGAATAAGAAAAGGCTTAAGGACGAGC TGAGTAGCAGTTAAAGTGAGCGAGAAATCGAATGAATACCAGAAAATTTC AAGCAAGCACATAAAAGTATGCAATATTTTGTTTAAAAACAACTTTTTAT TAGTTTCTTAAATATAACATAATTACGTACATACACACACGTATATATAG GGCTATATATATCTATATATATATATATATACATGATAGACAAATCCCAA TCCGGTTCCAAGGTTTAGTAAAAATAAAGAGAAATAAAACGAAAAACAAA AACTTTTGATATGAAATCCTACGCATAATTAACAACTTTTATTGTTTCTA AGACTTAAACTTAATTAAAATGGAAACCAAAACAGACTGACGGACCGACC CCGACAGCATGCCACGCCCTCCCCCGCCCCACCCTCCACAGATCCTGGCA GAAATTTCAAAGGAGTTTGATACACAAATCGAGAAAAGAAATTTTCAAAA AAATAATATAAAGACAAGCAAACGGCGACTTTTTTGGTTGATACATTTGA AAAGAATATACAATTAAATATCTGACTGACTATACAAAGACGTTACACAC ACGCATACACATACACACACATACACGCATACACACACAGCTTACGATAC ATAAATTAGTTAAACTTAGAGTAAACAAACAACAACAAACACATTGGATA GTAGGTGATAATTGGTGTGTCTTAAATAAACCTTAACCCCTCCCCGACCC CCGCCCACTTGCTTAATACCCAACGCCCCAAAAAGCCCCACATTTCTACT AAATGAAAAGCTTAATCAAAACTTTTTTGAAATTATTCAAGTGAAAATTT CAGCAGGCAGGCATAAATATTAATTAACATTAATTATAGCAAGGAAACTT ATAAATAAAATGTATACAACAAAACTACAAAAATTAAATAAATTACATTT TGCAAATTCCACAAAAAATAAAACATGATTTTGCAAATTCACTTAAAATC CTTTCCCTGAATCCAAGCAAAAATATTTACACTAGCTTACATAGAACTGG GACGAGGACATGAATATTTCAATTGAGAAAAAAATCTATGTTAATGTAAT CGATCGATTTGGACATATTTAAGTTCGACATTTTTGGCCTTACAAAACAA AAAACAAAAAGAAGAAACCTAAAGTACTTTATATATATACAAACCATATA TACAATATAGAGAATACAAAACTAGTTTTAATTTATACAAAGCAAGGGAG CAGCTTTCAAACTCAAAACAAAAATATCCCCGAAAAAAACAACAACTTTG TTAAAAACTGCGCATAATAAAGAAAATAATAAACAAAGTTAATCTATAAT ATAAATTGAAGTTAAGTTGATTTGAGCGGTCGACAACAAGAACATAAATG TATCTTTAAATGATATATGTATTGTTAAATTTGTATGCTAAGTTTTTAGA AAGGTTACATTTTTAAAGAATAATAACAAAAGATCGCGAACTCGACAAGG TGTAAAATGAGTACATTTAAATTAAAATTTAGCATATATAATGCATAAAT ATTATGTTACGATATTTACATTTATATAAAACAAAACAAAAACACTAAAG AAAACCGAAAAAACAGAAGTCCCATATTAAAAATGAAATAAAATGAGCAG AACCTATAAACTGATAAGGGAATTCTGAATATT
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) Hr46-RA FBtr0088368 6071 Hr46-RC FBtr0088366 6466 Hr46-RE FBtr0302438 6385 Hr46-RF FBtr0306345 7407 Hr46-RG FBtr0306346 4170 Hr46-RH FBtr0330609 6071
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) Hr46-PD FBpp0111711 456
Derived from OTHER transcripts	Name FlyBase ID Length (aa) Hr46-PA FBpp0087456 487 Hr46-PC FBpp0087454 694 Hr46-PE FBpp0291630 874 Hr46-PF FBpp0297438 487 Hr46-PG FBpp0297439 372 Hr46-PH FBpp0303459 529
Comments
	Monocistronic transcript; alternative dicistronic transcript(s) exist. Transcript terminates at site supported by polyadenylated cDNA.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_001103786
Synonyms
	Hr46-RD
References ( 1 )
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453]