A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Transcript Dmel\CG9003-RC

General Information
Symbol Dmel\CG9003-RC Species D. melanogaster
Annotation Symbol CG9003-RC FlyBase ID FBtr0113068
Feature type mRNA Associated gene Dmel\CG9003
Evidence Rank Strongly Supported Length (nt) 2368
Evidence Score 11
Map ( GBrowse ) GBrowse View Help detailed view FBtr0306029 FBtr0088088 FBtr0113067 FBtr0113068 FBtr0330634 FBtr0330632 FBtr0113069 FBtr0330633 FBtr0112421 FBtr0088087 FBtr0088071 FBtr0088085 FBtr0302211
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide cDNA Clones Consistent with the Transcript ( 33 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the
annotated transcript,
internally consistent
End(s) extend beyond
the annotated transcript,
internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the
annotated transcript,
internally consistent
End(s) extend beyond
the annotated transcript,
internally consistent
hide Sequence 
AGTTCTCATTCGGCGCTCTGTTGTCATCGATGTTGTCTCGCGAAAAGTGC
AGCTCTCGTTCGCTTTTCGTGTCTCGCGTTTCTGCATTTACACGGTTTTT
CCTCGCAGCTGAGGAAAAATCGAAAGAAAATCTATTTCACGCAAGCCCAG
CTGAAAATATAAACAAATGCAAACATTCCTAGGCGCCACCGAACTGGACG
ATGAGTTAATCAAACAACTGCCAAAGGAGGTACTGCTGCGCGTCTTCTCC
TACCTGGATGTTGTCTCACTATGCCGCTGTGCACAGGTATGCAAATATTG
GAACGTGCTGGCCCTCGACGGTTCCAGCTGGCAGAAAATCAATCTATTCG
ACTTTCAACGTGATATCGAGGGTCCAGTGATTGAGAATATATCGCAGCGA
TGTCGCGGTTTTCTCAAGTCACTGTCGCTGCGTGGCTGCCAATCGGTGGG
AGATCAGTCCGTGAGAACTCTAGCGAACCACTGCCACAATATCGAGCACT
TAGATCTGTCGGATTGCAAGAAGATAACCGATATATCCACACAGTCCATC
AGCAGGTATTGCTCCAAGCTAACGGCCATTAATTTGCACTCGTGCTCCAA
CATAACAGACAACAGCTTGAAGTACTTATCCGATGGCTGTCCAAATCTCA
TGGAGATCAACGTGTCCTGGTGCCACCTGATCTCCGAGAATGGTGTGGAG
GCGCTGGCTCGTGGCTGCGTCAAGCTGCGCAAATTCAGCAGTAAAGGTTG
TAAACAAATAAACGACAATGCCATAATGTGCCTGGCCAAATACTGTCCCG
ATTTAATGGTGCTAAATCTACACAGCTGCGAGACCATAACCGATTCATCG
ATTCGCCAACTGGCCGCCAATTGCCACAAGCTGCAGAAGTTGTGCGTGTC
CAAGTGCGCGGACCTCACCGATCTCACTCTGTTGTCCCTCTCGCAGCACA
ATCATCTACTGAACACCCTGGAGGTATCCGGGTGTCGCAACTTCACGGAC
ATTGGCTTCCAGGCGCTGGGGCGAAACTGCAAGTATCTGGAGCGAATGGA
CCTGGAGGAGTGCAGCCAGATTACAGACCTAACGTTGGCTCATCTTGCCA
CTGGCTGTCCCAGCTTAGAGAAATTGACCCTATCGCACTGTGAGCTGATT
ACGGACGATGGTATTCGACACCTCACCACTGGCAGCTGTGCTGCCGAAAT
TCTGTCCGTGCTGGAGCTAGACAACTGCCCCCTGATAACCGACCGAACGC
TAGAGCATTTGGTGTCCTGCCACAATCTGCAGCGCATCGAGTTATTCGAC
TGTCAGCTTATCACCCGCACCGCCATACGCAAGCTGAAGAACCATCTACC
AAATATCAAGGTGCACGCCTACTTCGCCCCCGGAACGCCGCCGGCTGTGA
CCAGCGGACACCGACCACGCTATTGCCGCTGCTGTGAGATTCTCTGAGAT
ACGGCCATCGGCTTCGCCAGAAAGATAATGCGAAAGACAGCCACGGACTG
ATGCTGGCCCGTGTGCATCGTCATGTTCGCCATGGTGTTCAGCCTGACCC
TCGTCTCGATGATCTGCATGTACTTGCTGGGCCTGCTCGACGCGGCGATG
ACCACATGGCCACCAGATTCAAATTAAGATCCATCCGACACAGCAGAAAC
AGCAGCAGCAGCAGCAGCAGCAGCGGCTCGATCGAAATCGAAACCTTACC
CTAGTTTTAATTTAAAGCGAGTTTCAAAAACTCGCAGAAACCAGCATCAA
ATTGTGATTATTTTATTTACTATGCTACGTTATCTAGACCCTCACTTGTG
TAAACTGTATTAGCGCCCACACTCTGTTTGTTATTAACTGCAGCCCGATG
AATTGCTAGCTTATATAGATCTGTATATATACATATATGTAGTCGATCCA
CGGCAGCTTCAGATGGTTCCGCTGAATGTTCTGTGTCTAGCCTAAAAAAC
TGCAATTATGTGCGTTTAGTTTTAACTCTCATACACGCATGCCTGTATTA
AAAGTGTTTGCTAAATTATGACTAAATTAAAAATCCATCTGGAGCATGCT
TCGGACTTTATCTCTCACTGGTCCCAAAAAAAAAAAAACGAAAAGAAAAA
ATACTGGAGTTTCCAAATTCCGAAACATGTCGATAGAACCGCAAAGCGTT
CAAAACACTTACTATCCGAGATACTATTAATTTCACTTTTAGTCTACTCA
AGTCTAGTGCCAGCTAAACTGTTCAGCAATTAGCATTATCTATGTATAGC
CATGTATATTACACAACGAACAAAACGACTCACACTGGATCATCTTTCCC
GAAACACCAAGCATTACCCACGTCAATAATCCAATAAATCTATATACACC
TTTTGGGTTCACACAGAT
hide Other Products of this Gene
Other Transcripts
Name
FlyBase ID
Length (nt)
CG9003-RA
FBtr0088088
2703
CG9003-RB
FBtr0113067
3810
CG9003-RD
FBtr0113069
2902
CG9003-RE
FBtr0330632
2885
CG9003-RF
FBtr0330633
2885
CG9003-RG
FBtr0330634
3693
 
Polypeptides
Derived from
THIS transcript
Name
FlyBase ID
Length (aa)
CG9003-PC
FBpp0111981
426
 
Derived from
OTHER transcripts
Name
FlyBase ID
Length (aa)
CG9003-PA
FBpp0087190
464
CG9003-PB
FBpp0111980
651
CG9003-PD
FBpp0111982
437
CG9003-PE
FBpp0303482
455
CG9003-PF
FBpp0303483
497
CG9003-PG
FBpp0303484
437
 
hide Comments
  • Transcriptional initiation site supported by short-capped RNA data (FBrf0209722).
  • Transcript terminates at site supported by polyadenylated cDNA.
hide External Crossreferences
RefSeq - An integrated, non-redundant set of sequences
•
hide Synonyms
CG9003-RC
 
hide References ( 1 )
FlyBase analysis
FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome.
Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453]