Transcript Dmel\Pdp1-RJ

General Information
Symbol	Dmel\Pdp1-RJ	Species	D. melanogaster
Annotation Symbol	CG17888-RJ	FlyBase ID	FBtr0300500
Feature type	mRNA	Associated gene	Dmel\Pdp1

Evidence Rank	Weakly Supported	Length (nt)	4643
Evidence Score	3

Map ( GBrowse )
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 83 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	12276 44417 44423 56607 60188 61618 65371 74404 78666 81118 107961 119432 119500 160089 162183 174505 174694 175130 175437 177385 190865 191093 214243.78 214539.74 CK01.31B.E9 CK01.77D.E10 CK01.82D.D11 CK01.85D.G12 CK01.87B.A6 CK01.107B.F1 CK01.110C.H12 CK01.111B.C4 CK01.123D.D4 CK01.126D.C5 Dmel_neb_008189_0164_3003 EC205580 EK060749 EK066214 EK066405 EK067958 EK069035 EK094246 EK097111 EK097229 EK112716 EK138307 EK139304 EK159620 EK159632 EK168925 EK187231 EK202004 EK203843 EK208127 EK221831 EK229316 EK234176 EK239112 EK265626 EK276431 EK279614 EK293917 EP10158 EP11457 GH02508 GH02520 GM06388 HL01218 LP09643 RE25787 RE46575
End(s) extend beyond the annotated transcript, internally consistent	245 67102 145373 193654 CK01.19A.F9 EK195041 EK252242 RH44324 RH67449 RH68601 RH69246 RH69662
Sequence
	CGTTCTCATGTGAAAATCGTCGCAGCTCGTTCCGTGTTTTCGCCACTCGA GCGGGAAAATCAAAAAATATTTCTACGCTCAACAAAATAAATTAATTGAA ATTGATTTTTCAAGCAACAGAAATAGTTCTAGAAGAACTATAAATCGAGG AAGTCATTTTTGTTTTATCAAATTTCAAGTGCAATGGGTTCATTGTGAAA TCAATCTAAAGTGTGTGTGTGTGTGTCATTCGAATAATTACTATTATTAA AAAAGAAATAAATACGCAGAAAGAGAGAGAGAGATCGAACGAGGCAGAGT GAAAGAGAGAGATAGAGAAAAAAGCGAGAGATCCGGAGATCTCTCGAGAA TCTTTAAACAACAGCGCTAAAGTTACGGATCTAATTTCAAACAGTTTAAT TTACTTTTAATTTTTCTACAAAACAACAAACTTCAAAAAGAAAAATACGA ACCAGCAAAACTCAAAGCAAAAAACGATCTCATATCCAAGCGCAGCAACA AATTCTGAGAATAAGAAAAGATAACACAGACAAGCGTTTATGTTAAAAAC AAAAAAACTAAAGTGAACCCAAGTGTAAAGACAATGCGCACAACTTTTGG CCGTGGCCCAAAGTTTATACTGCTGACCAGCAAATTTAATCACGTTCAGC ACAAGGAGGTGATCACCTAGGATCATCAGAAAACAGTGATTAACCGTAAC CAGTGAAGGATAACCCAGTGAATAACGTACCCAGTTGTTGAAACCAGTGA TCATGTCGTCGGATACGAATTCGTGTACTAGTTTCTTTGCCCAGGAGCAC GCGAATGCCACATTGTCGCAGTATTTCCAGCAGCTTAACTCGCACGTTGC TGCTGCAGCGGCGGGCAATAGCGGTGGCAACAGCAGCAGCAGCAACAACA ACAACAGCAGCGGCAACAACAGCAGCAGCGGCAACAGCGACAGCGGAAAT GATGGCAGCATGACAGGATCATCGGGAACCATGGACAACCATCGCAGCAG TGTTAGCAGCAATGATTCGGGCAAGAGTAGCGCCACAGGAGGCGGCGGGG CAGGTGCCACCAGCAACAATGGCGTGAATGCCTGGGCCTTGCAGCAGCAG CAACAAACCGCCGCCCTGCACCATCAGCAACAGCAGCAGCATCAACAGCA GCAGCAACACCAACAGCACCTACAGCAACACCATCAAGCGCACCATCAGC ATGTCCTGCAGCAGCAGCAGCAGCAGCAACAGCAGCACTCCCAGCATCAG CATCAGCAGCAACATCACGGCCACCCGTTGCATCCGCATCATACACACCA GCAGCAACAACAACAACAACAGCAGCAGCAGCCGCCGCCGCAACACCACC AGCAGCAGCAACAGCAGCACGCACAGCAGCAGCAGCAGCAGCATCATGCC GCCCAGCTGGCACATACACTGTCATCGGCCGCCGTTGCTGCTGCAGCCGG GAATACCGGTGGCAACACCAACCCCCACTCCATTTTCGGCACCGGCAACT TCCACTACAAGACGAACAACTCGTGGACGCTGCCCACGCTAACGTACCAG AGGATTTACCAGGAGAATCCCCATTACCAGCGCAACTCCTTCATGGATCC GCAGAGTAATGCCGCTGCAGCTGCAGCAGCTGCTGCTGCCAGTTGCAATG CTGCCGCTGTTGCGGCAGCCGCTGCAGTTGCAAGTGGCAACCAGGGATCG AATGGGAATGCCAGTGGCAATGGTAATGCTGTTGTGGCGGCAACTGGTAA TGGAAATGGTGGAAATCCCGGCCAGAATAACAACAACAATAACGGCAACA ATAGTGGCAATAGCAACAATAACAGCAACAACAATGTGTCCTCCGTGCAA CATGTGGCAAATGCCGTCGCAGCGGCAGTGATCGCCAATGAGCATCACAA CCATTTGAACAGCTTGAAAGCGCGATTTCAGCCAGCCAGCTCAGGCAAAT CCACATCGAATAGCAAAGAGATCATCTGCCCAGATGACAAATACAAGGAG GAGGGCGACATCTGGAATGTTGAGGCGCAAACAGCGTTTCTCGGCCCAAA TCTGTGGGACAAGACCCTGCCCTATGATGCCGACCTCAAGGTAACACAAT ATGCCGACCTAGACGAATTCCTGTCGGAGAACAACATACCTGATGGCCTG CCCGGCACGCATCTGGGCCACTCCAGTGGCCTGGGCCACCGGTCCGATTC CCTGGGTCACGCAGCGGGTCTGTCTCTTGGTCTTGGCCACATAACCACAA AGCGAGAGCGGTCGCCCTCGCCATCCGACTGCATCAGTCCGGACACGCTA AATCCGCCATCGCCGGCCGAGTCAACATTTTCGTTCGCCTCCTCGGGCCG TGACTTTGATCCGCGAACCAGAGCCTTCTCCGACGAGGAGCTCAAGCCGC AGCCGATGATCAAAAAGTCACGCAAGCAATTCGTTCCAGATGAGCTCAAG GACGACAAGTACTGGGCACGTCGCCGGAAGAACAACATTGCCGCCAAGCG ATCCCGCGATGCCCGGCGCCAGAAGGAGAACCAGATTGCGATGCGGGCAC GCTACTTGGAGAAGGAAAATGCAACATTACATCAGGAGGTGGAGCAGTTG AAACAGGAGAACATGGACTTGCGTGCACGTCTATCGAAATTCCAAGATGT GTAATGATAAATACAATTTTGTGACTTGGCCTGAGGACACCACAACAATT AAATAATAATAACTATTGATAAAATAACAATAATCATAACTATGATAAAA CTACTAATAATGTTTAGTACAGCAGACATGAAACCTACACTATAAAGTAC ATATTGTATCTAAATATGTATATGCAAAAGTATAATTAGTAAGCAAACAC ACACCCACACAAACACAAGAAACCCCTCACGGCGTCGTGCTCCGCTTTAA TATTTATTTTATGCTAAAAACTAAAAGCAAATTAACTAAACACCGAGGAG GAGAAACCGACCGAATGGAAACTAAAAACATTTTTTAGAGTAGCCAAAAA AAAAGAAAGTCTCACGAGAGCAGAGCGTTGAAAAGCTCTGCAGCCGAAGC TTTTTGCCTTTAACGTAGCATACTTCCGAGCGCAATGGGAATCCTAAAAA AAAAACACAGACGTAGAATTGTTATCTTTTAAATTGTTTAATAGTTGTCT AGCCTAGTTTTACGCAAAAAAAAAAACACTTCTCTTCTTCGACTTCTTTT GCTATTGTTTTCACCCTTCTACTTTAGTTTTTATTATTCTTTGTAATTAG CTGTTTGATTAAGTTTTTCTTTAGCTTATAGTGAACGGAAATCCACATGC ACACAACAAATCATATTGTAAATAATTTCGTTGCCTTTTTTCAAATTAAC TCGAGAGAGGAATTACCATAAAATGCAAAAGAAAACATGTATAAAAAATT GCAAAATGAAAACCCACAAAAAAAAAAGAGAAAATTAAAGGAACGCTAAG AGAAAACCATTTAGAGATGAGCAAAGAACTTCCCTCCTCAGTTGCCGGGC ACTTGGCAGCTGTTTAGTTTAAGTGAGCTATGATTTTTATAAAAACCTAA TGAAAAAAATATCAGAAAACCCCAAAAAAATTAAAAACGGACGGACAGAG ACAGACGGTGGACAGACAGAAATGAAAAACTAGAAGTGAAATAGTTTTCG TTGTTGATTTCTTGATACTAAAATAACCAACCCAAAACTAACCCAGACAT AGTCAGCTGGCTAAAGCGAGAGAACGAGTTTTCTCACTTCCTACTAAGAA CTACATACACACAGACCATCTGCGAAAAACCCCTTCATACCATGCTAACA CTCTACAAATTTTCACATTTTTCCTTTTAGTTGTAAACATTTTATTCGTT TAACTTTTATTACAAGAAAAAACTATTTCTTTTGGTGTGATTTGCAAGAT CTTAAACAAACAATTTAAAAACAAAACATTTTTACATAATACCATACAAT TATGTTACTTTAAACAACAACTATTTTCGTTAGTTAAGTTTATTAATTAT TATTATTTGTTATACATTTGAGTTACATTTACCTGCATACAATTATATAG AAATTTAAGAAAATATATGAAACCGGAAAAAAAACTTACCGACCGAGAGC AAAATTTATATTTTATATTCAGCAAACAATATGGAAGCTATAAACAAAAG CGTAGAGAGATAAATAAGTCCATTAAGCACTCTTTCTAAACAAATTTCAA TAAGTTATAGAATAAATCTATGGAAAAATGTGCAAAACCAACAAAAAAAC TCAAAGAAGAACGACAAAAGTAAAGATCGATAAAGGAGAATGAGCGTAAC GAAAAAGTGAGAAAGCAAAAAACGATTTGTGTGTAATAATAAAAGTCTAA GCGTTGCTTTTAACTATTGAAAACTCGTTTATTTTCTATCTATCCACCCA CAACACCACCCCACAGATGCCCCCATCCCCTCGCCGCATAGCTCATTGTA GTAAATATATAATGAAAACCATACATGGATCTCAAGACAGAGTTAAAGAA ATAAACCTAAAGCCGTAACCGAAATCGAAACTAACCCTAACGATAGACGC AAGAACTACAAAGATTATATAGTAATCAGTAATATAGCAATATAGATATT TAGCCAAACCCCTGTTTTTTTTATGTTTATTAAAAAGAATCCC
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) Pdp1-RB FBtr0076776 5065 Pdp1-RC FBtr0076782 4746 Pdp1-RD FBtr0076780 4702 Pdp1-RF FBtr0076775 2828 Pdp1-RG FBtr0076777 5107 Pdp1-RI FBtr0300499 3862 Pdp1-RK FBtr0306535 6398 Pdp1-RL FBtr0332080 4197 Pdp1-RM FBtr0332081 5080 Pdp1-RN FBtr0332082 5098 Pdp1-RO FBtr0332083 2870
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) Pdp1-PJ FBpp0289727 633
Derived from OTHER transcripts	Name FlyBase ID Length (aa) Pdp1-PB FBpp0076491 270 Pdp1-PC FBpp0076497 570 Pdp1-PD FBpp0076495 647 Pdp1-PF FBpp0076490 250 Pdp1-PG FBpp0076492 284 Pdp1-PI FBpp0289726 232 Pdp1-PK FBpp0297493 270 Pdp1-PL FBpp0304390 581 Pdp1-PM FBpp0304391 275 Pdp1-PN FBpp0304392 281 Pdp1-PO FBpp0304393 264
Comments
	Synonym (FBrf0130038): PDP1-epsilon Transcript terminates at site supported by polyadenylated cDNA.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_168238
Synonyms
	Pdp1-RJ
References ( 1 )
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453]