A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Transcript Dmel\Sytα-RC

General Information
Symbol Dmel\Sytα-RC Species D. melanogaster
Annotation Symbol CG5559-RC FlyBase ID FBtr0303255
Feature type mRNA Associated gene Dmel\Sytα
Evidence Rank Moderately Supported Length (nt) 2189
Evidence Score 7
Map ( GBrowse ) GBrowse View Help detailed view FBtr0080986 FBtr0303252 FBtr0303253 FBtr0303254 FBtr0080989 FBtr0340254 FBtr0080987 FBtr0340251 FBtr0303255
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide cDNA Clones Consistent with the Transcript ( 4 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the
annotated transcript,
internally consistent
End(s) extend beyond
the annotated transcript,
internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the
annotated transcript,
internally consistent
End(s) extend beyond
the annotated transcript,
internally consistent
hide Sequence
GCGAAAATTCAACCGCTTCCAGTTATCTCTTTACTTGGCTAAATTTATTT
GATGTAATTGACCAATGTGAGCAGGGGATTATTGAGTTAAAAATTAATAA
AAGCCCGCTAATACGGAAATTGCTTCGAAAACTCGTTAACAACACGCACA
ATATGCATGCCACTGTGTAGAGCAAATTGCGCATACGCCACGTTGAACTG
TCGTATTCGTATTCGTATTCGGGATTTCGTAAACATATTGTTGCGGTAAA
TTGCATGCAGCAATTTCAATAAGAAAATTGTTTGCACAGTTTTTGTTCGG
CTTTGTGTCACCGATTTGCAAATATTTAAGGGATTCACTCTCAGCCGGAG
AAATGGACATTGTCATACGTGAGGAGGACATTTCTTTGGCCCAAATTGGC
GTCTATGCCTCTGTGTCCTTTCTCGTTGTTTCTGCAGTTGGGGCAGCGCT
GTATACCACCTGCTCAAAACGCTATCGCCTGAACTGGTTCGAACAAAATC
TCCTGGAGTCCGCCAACGAAAAGGATGAAGATCAGCAAAGGGAGGCTTTG
GTTGCCGGTGCCGTGGGCTACAATGTGGACAACGTGAACGAGGTACCGCG
TGGGAAATACAGCAGCGGAAATGCCGGTAACCTCAGCCCCACCTCTCTGA
AAAGCGAGGACAATGACCCGGCCTTTTGGGTGCCGGCTTCAGTCACCTCC
ACGGCAGCCATCCAGCAACAAGTGTCCAATACCACCGAGGAGTCCGCACC
GCCAACATCACCCACCGGGAGCCTGAAGTCAAACACCTTGTCCTACTGTT
CCACCACCTCCGTGCCAATCGCGAGATCTGATAAGCATGTGGTCCTTGCT
ATGCATCCGAGCCGTCCCAGAGTTTCCTCTATGAACGCCAAGCTGGATCA
CACCAAAATCGACATGACCTTGTATAGAAGTCATTCTCAGCCGAAGACTA
TCAATCCAGTTTCACTCAACGAAGTTCGGGGTAATTTGCATGTGAGTCTT
GGCTACGATCCAGTTGGAGGATTGCTAAATGTTCGACTCCTGGAGGCCCA
GAATCTGCAACCGAGGCAATTTAGTGGAACTGCCGACCCATATGCCAAAG
TCCGCTTGCTGCCGGATAAAAAGAACTTTTGGCAGACGCGTATACACAAG
AGGACCCTGAATCCAGTTTTCGACGAGCAGTTTGTTTTTGAGGTAACAGC
CGGAGTAATTGACAAGCGTACTGTGGAAATTTTACTATACGACTTTGATG
CTTATTCCCGGCACGTTTGCATCGGAGGAAGTAAGCTACATTTGGCCAAC
TTGGATCTCAGCGAGCAATTGAAGTTGTGGACTCCTCTTAGTTCTGCCTC
GGCCCAAGATATGAAGGTGGATTTGGGCGATATAATGGTGTCCCTAGCCT
ATTTGCCATCAGCGGAGCGTTTGATGGTCGTCCTTATCAAGGCACGAAAC
CTGCGGATTGTCGACGATGCCCGGAACTCCTCGGACCCTTATGTAAAGGT
AACCCTCCTCGGTCCCGGTGGCAAAAAGATAAAGAAACGCAAGACGGGCG
TTCAAAGGGGCACCCTGAACCCAGTCTATAATGAGGCTCTTGCTTTCGAT
GTGGCCAAGGAGACTTTAAAAAACTGTGTACTAGAATTCACCGTAGTCCA
CGATGGCCTATTGGGATCAAGTGAAATATTAGGACGAACTCTCATTGGAA
ACTCTCCGGAAGTACGCACCGAGGAAAAAATATTTTTTGAAGAAGTTTTT
CGTGCCAAAAATGCTACGGCTCAATGGGTTCCACTGCAAGAACCGGCAAA
CAATTTGGCCACATCGGCCAAAAGTTCAAAGAACTAGAGTTTTGTATTAT
TGTAAAGGTATTTTTTTCAGTATTTCCACAGATGTCATCCTTATTTCTAA
GGATGTGTGTGTACTCGGTTGCAGGCGATAAAAAAATACCAAAATATCCT
TTTGCCTTGTGTCTCAAAAGAGACATCGATGGTGGCTGTCTTGGATGCGT
GTAGAAATGTGAATGAAGTGAATATCCAAACCTTTTTTGTGTTAGCACTG
TCATGTTAATAACATTTAAAGATTCTGTAATGCGAAAGAACGAGCCACTT
ATTAAAACAAGAAATTATATATATTATTCTGTGTATATATACGCTTTAAC
GATCGGAAGATAATATATTTAAAACTTCGTCAACTTTTC
hide Other Products of this Gene
Other Transcripts
Name
FlyBase ID
Length (nt)
FBtr0080987
2037
FBtr0303254
1931
FBtr0340251
2936
 
Polypeptides
Derived from
THIS transcript
Name
FlyBase ID
Length (aa)
FBpp0292347
494
 
Derived from
OTHER transcripts
Name
FlyBase ID
Length (aa)
FBpp0080540
494
FBpp0292346
504
FBpp0309223
494
 
hide Comments
  • Location of first exon estimated from RNAseq data.
  • Transcript terminates at site supported by polyadenylated cDNA.
hide External Crossreferences
RefSeq - An integrated, non-redundant set of sequences
hide Synonyms
Sytα-RC
 
hide References ( 1 )
FlyBase analysis
FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome.
Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453]