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General Information
Symbol
Dmel\Ca-β-RJ
Species
D. melanogaster
Annotation Symbol
CG42403-RJ
FlyBase ID
FBtr0306386
Feature type
Associated gene
Evidence Rank
Length (nt)
5788
Evidence Score
Genomic Location
cDNA Clones Consistent with the Transcript ( 0 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
          End(s) extend beyond the annotated transcript, internally consistent
            Sequence
            GGTCGCATATTCAGACGTCTCCACCGCGAACCGCTTGAAACTGCTCCACATTGCTTTGCCCAAGTGGATCACGCCCTCGG
            AACATAAATCCCATCAAGCATATAGATTCCAGCAGGATGGCGTTGCGTTCGTTCAAATCGCTGCCATGTGACGGACTCTA
            AGTCCCATAGCCACATTTGTGACCCAATTCGATGAGCAATTGTGTCTGTGTGCCTGTGTGTGTGTGTGTGTGTGCGGGGC
            TCTTGGCCATTTAACGATTAGTGGCCATAACGGCAAAGTGTTTGTTTATTTTGTTGTGCGACCGCAGAAACGATTCCAAA
            AATGATTGCATAATTGACTTTTGGCGGGGGGGTGTAGAAATCGCGCTAGACGCTCAGCATAAATTTCGGCTTGTGTTCCT
            ATACCGTTTGTGATTCCAAAACAATTTGTGAGCCATGAAAAAGCTTCATCTGGGTGCCAAGCACAAGGGCAAGTCCTACA
            AGCCCTTTAGGAATAAGAATCGTCGGGGTTCTGCCGACTCGAACTACTCACAACCGTCATCCGATCTGTCGCTAGACGAG
            GAAAAGGAATCGCTTCGGCGAGAAAAGGAACGTCAGGCCTTAAGCCAGTTGGATAAAGCGAGGAGCAAACCAGTGGCGTT
            CGCTGTGCGAACCAACGTAGCATACGATGGCGCCATCGACGACGATTCGCCGGTGCAGGGCGGAGCAGTTTCGTTCGAGA
            TCCGGGAATTCCTGCACATCAAAGAGAAGTACGACAATAACTGGTGGATCGGCCGGCTGGTCAAGGAGGGCTGTGATGTG
            GGCTTCATACCCAGCCCCGCTAAGCTAGACAACATTCGCATGCAGAACCAAACCAGACCCTCAAGACTGTATGGCACAAA
            GGGCTCGTCGAGCGGGAATCTTGGTGCGGGCGGACAAGCAGGTGCGGAGCCATCTCGAGGTGACGAATCAGATTCCATGG
            GACCAGGACGACACGGCAAGACACCGGCGGCGGCGGCCAACAAGGAGAAGCGAAAGCCATTCTTCAAGAAACAGGAGACG
            GCCAGTCCCTACGACGTGGTGCCCTCGATGCGTCCCGTCGTCCTGGTGGGGCCCAGTTTGAAGGGCTACGAGGTGACCGA
            CATGATGCAGAAAGCCCTCTTCGACTTCCTCAAGCACCGCTTCGAGGGCCGCATCATCATCACCCGGGTGATGGCCGACA
            TCTCGCTGGCCAAGCGCTCCATCATGAACAATCCCTCGAAGCGGGCCATCATGGAGCGATCCTCCAGCCGGAGCGACTGC
            CTCGGCAAGGTGCAGGAGGAGATCGAGCGCATCTTCGAGCTGGCCCGCTCGCTCCAGCTGGTCGTGCTCGATTGTGATAC
            AATCAATCATCCGTCACAACTAGCGAAAACTTCATTAGCGCCAACAATAGTGTACTTAAAGATTAGTAGTAGTAAGGTTT
            TACAGCGTTTGATCAAATCACGTGGCAAGTCGCAGGCGAAAAACCTCTCCGTTCAAATGGTTGCCGCCGAGAAGCTAGCC
            CAATGTCCACCGGATATGTTCGATGTAATCCTAGACGAGAATCAGCTGGAAGACGCCTGCGAGCACATTGCCGAGTACTT
            GGAGACGTATTGGAAGGCCACCCACCCGGACATTCGAGCAGTGCCGCCCATCGCCCGCCCCCTGCCGCAGGAGGCCTCGC
            CCTCCGCAGATCCCGCGCGTCTGGGACCGACGCCTCCAGGAGGAACCTCTTACCAGCACAGCCGCCGACAACCGACCTCG
            GTACGCCACCAGGAGCGCGGCGGAGGGGTGGGCGCAGGCGGCGGAGGTGGAGGCGTCGGCGGTGGCTACGAGCGGGACCG
            CGAACGGGAGCGGTACGAGCGGCGCGAGCGTGACCTCATGCACTACGATCTCAATAGCGACGAGCTGCTGGACGAGCGCA
            ACTTTGAGTATCCGGCGATGAGGAGCGGTCCCAGCGGCGCCTCCCACCACGGCCATCTGTCCAGGGGCGGACGCCTGCTG
            GAGGATCCGGACTTTGAGCGCGAAGAGGCCCAGATGCGGATGAGCAGCTCACGCTACGGACCCTCGACCAGGATCGACGA
            CCCACGGGATCTGCCGCGTGGCGCCACCGTTGTCGATCGCGATGAATACAGTCCGCACAGAGGTGGTGGGAGTAGTAGGA
            GAATGCTTAATGCCATGTCCAGACCTTTAGGTCTGCCACGCCAATCCTCCCTGCCCAGTAATAGAGCACCCGTGTCGTAT
            TTGCCACGCCAGTCCTCCCTGGGCACACACTGGCTATCCTCCTCCTCGCAGAGCAACCTGGATCAAGGACCCCAATCTCG
            CCGAGAGCTTTATCCACTGCTGCATCAGCCGCAGTCCTATTCCCAGCCTCGATCCCAGTACACCAGCCACTCGTATACAT
            CCGCACCACAGCACACCAGTCAGTCGCGTTCCCAGTCCCAGTCGCACTCCCAGTCCCACTCTCAGTATCGCTACTCCGTG
            CAGGACACATCGTTTGCCCACCCACCAAGATCCCTGCGCGAAGAGTTCCTCAGTCCCACCATGAGCAAGGTCGAAGCTGT
            CACCCACGCCATTCGCAACAAGATCATCGTGGAGGAGGACGAAGAGGATATCCTGAGCACGGATCGGTTCTATTAAAGAG
            ATTTCAGTCGTCCAACCCGCGTCGATTTTGGTTTGGGTAAACTCTTCCTTGCGGGCGGGAAAGCAAGTGCAGCAGTGCCA
            AAACACACGACACATTTGTAAATGTTCCATTCGATGATCAGATCAATTTGATAGATACAGCGACACAGATACATCCACAC
            ACACAAACAGAAACACACACACACAAAGTAGCTGGTTAAAGTTAAAGTGAGCGTTAAAGTGGCGGTTAAAGCAAACCAAA
            GGAAGCAGCCCAATGCCAAGTGGGGCCTTATGTGTCTTAAATGCTATAGCTAAGTGTAATCAGATTTTATTTGAGTAATG
            TGAATTTAAATTAAATGGTCTAAGCCTAAGATTTAAGCTAGTCGACAGTGGGAAATTAAAAGTTAAAAGAAAGGAGTCCG
            AAACCAAAGCCAACAGGATTTGTTGGTCCCCAAATGGGTCTCGTATTTGTTATGCAATCGATTGACTAAGTACATGAATA
            AGTGTCAGCTTTAATAATTTAGTGAACGTGTCTTAATCTAAGTCGAGCCACACAAACACACCTCCACACACTCGACACAC
            ACACACACACTCTTACACTCTCAATTGACTGTGAACCGATTGAAATCTCTTTAATCTCAAACCGATACCTATTTCTCGCA
            TCCAGCGCTTTTCCTTCTCTACACAGAAAAATTTACACTTACAGTGCGTCTCAAAGCCATATGATCATGAGTTGAAATTA
            ATTGATATATCCATAATGTATTTATTCTATAATTTTGAAAGCTTAAGCTTGAAGTTTTTAACTGAATATTTCTTAAATAC
            GGCCGTACATCTAATACTATCATTTTATTAGTTGTTAAACATTTGTATTATATATCTTGAATGAAACGCATTGTACACAA
            TTTCAACTTCCAACAGCAATACTTTCGACCTAGATACCTTGCCACACCATATCATGCCACACACCTGCCAAAGCGCACAG
            TTCGCGATCTCAGTTCAAAACTCAAGTTGAACTAGCCGCGAACGGGCCTGCAACCTGGATAAGGATCGAAAATCGATTCA
            GGTTTAGGTATAGCGATTTAAACTACCAGTGCCTTATAAATCCATCAAATCGAGTTACACGACAGCACTCCACCCCAGAT
            ATTCTGCATTTCCGCCGCCCCATTAGATCATTATTGACCACCACCAATCGCTAAAGTCGAATGCGTCAAAATTATTGTTC
            AAGTTTTGAATTGTACACGTAATGTTGAGACGATAGTCGTTGATCTGGCCCATTCCGAACGAGCACTCCTTTTACAATTC
            CAACCACCATGCTAAATTTGTCGATCATTAGTTGTCGAACTGAGCTAGCGCCCAACAATGATGAACCGCACTGCATTCAA
            ATCGATCGCCACCACCTCGAGTAAGAGTCGATGTTCAGCTAGTTTTGATCTGTAAGCACACCCACAGAACCCATCCTACT
            GTCCAAGGACAACAGCTGAATCCTGTAACACGGGGTCAGAGTTTAGTGACAGGTCGGGCAATTTGCCCGCAGAAAAAATC
            TAGTACTTTTTTATATAAGAGATACAAGGTGATATAACTAATTTTCAGAAAGTAAATTTGAACAGCGCACGACAAATACA
            GATACCTAATTGAAATTGTTAGCCACATTCAGGAGAGGGAGGGTTTAAAAGGTCAGATGGGAGAACACCTCCCATCCCCT
            AGAGAATTTGAATGGGGTTGACCAAGGCACTGGAGGCGCTTTAACGAGGAACAAATTGAAATTTAAATATATAACGGAAC
            GCAGCAAACGATACACAAGCACTTCTTGTAAAAAGTGGCAAAGCAAAATGATCTATGTATTAGCTAAACCTAAATGAAAT
            ATTACTTTTTAATACTAGCATAAAGTTAAAAACAAAACTAGATACGATCCTTTGCAGCTAAGAAGGGGACAAGCGGAAAA
            CTTAAGTTTAAATGGTCAGTTGATGAGAAGTGTGTATGTTAGAATATTGCACATAATTCACAGAACTGGTAATTCAATAT
            ATTATAATGGTATATATTAAAAAAGATACACACATTTATAGAGCTGCATATATAAATATGTATGTATGTTCTTGCCATAA
            TTAACAAAATTTAAACCGATAAAGATACATCAGCCGGCATTTTGTAAGCGTGAAATCCAAAAACTAATTAAAATAATATT
            GATTAAAAAATAACTGATTATCCCAGATATTGTTAGATACTTTCTGGTAACGGAAAGGTGAACTTTGCCATGAAAATTTC
            ATCAGATCTGATAGGAATATGTTGAAGATATTTTGTAAGATGCCTTAAATTTCTCAACTCAAGTTCTTTGAAAGTTTTCG
            AAAACTAAACTTGATAAATTCATATATTCCATTACATAACCTTCTAGCAGACGGACAGAGGTCTGCAAAGAAGTAAAACT
            GGTTTGCTTCAAAAGTATAGCAATTTTTTTGTAATAATAAACTCTTATTTCCGATTATAATAAAACAAATGAAAACCAAA
            CCAAGCAATTTCGATTTGTTGACACTCTTGAAAACTATAAAAAAAAAACACAAACATACAAACAAGTTTTATAGCAAGCA
            TACTGAAACTTTAAAGATACGCCTATATATAATTAAATTTAGCGGTAATAACTTCTCTACTTTTCAAAGCCACTTAAATA
            AGAAAAGCAAACCTTATTTTTTTAGCCTAAATAACTTATTGAACTGGAATAGAAGGTGGAAAATTTGACAAGAGCACGCA
            TGAAATTTCCGTAATCAATATATTATTAACCAAAGATCCCCACACCGAATACCCTGGAAAGATAAAAATGAACTATTGGT
            GGAAATATCAACACCGCTCCCAATTTATATAGAATATTTTATACATACAAAACATATACATATTGTAAAAAATGAGAAAA
            ACGGTAACTAAAATCCAATCAGCAATTTTCAAAAATTGTATGTAAATAGTTAATGATATTTCAATTTGTTACCTAATTAT
            TTTGTTAACAACTTTGTAAGATTCCTTTAATTTAATGTTAAGGATGAATACCTGCCATCACCTTGACGACATTTTGTTGT
            TTTCGTTTTCATTTTCCGCATTCAAATGTTGTTCACAATATGTTTTTGGAAAATACGTAGTTAAATGAAAGCTAAATTGC
            AAATAAAAGCAAATACAATAAAAATATT
            
            Other Products of this Gene
            Other Transcripts
            Name
            FlyBase ID
            Length (nt)
            FBtr0300536
            3739
            FBtr0300115
            4963
            FBtr0310279
            4514
            FBtr0310280
            5025
            FBtr0310281
            4461
            FBtr0343615
            4982
            FBtr0343616
            4530
            FBtr0343617
            5400
            Polypeptides
            Derived from THIS transcript
            Name
            FlyBase ID
            Length (aa)
            FBpp0297478
            733
            Derived from OTHER transcripts
            Name
            FlyBase ID
            Length (aa)
            FBpp0289763
            432
            FBpp0289392
            817
            FBpp0301962
            844
            FBpp0301963
            682
            FBpp0301964
            455
            FBpp0310210
            439
            FBpp0310211
            466
            FBpp0310212
            745
            Comments

            Extended 3' UTR based on EST and RNA-Seq data.

            External Crossreferences and Linkouts ( 1 )
            Crossreferences
            RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
            Synonyms and Secondary IDs (1)
            Reported As
            Symbol Synonym
            Ca-β-RJ
            Secondary FlyBase IDs
              References (0)