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General Information
Symbol
Dmel\CG43340-RN
Species
D. melanogaster
Annotation Symbol
CG43340-RN
FlyBase ID
FBtr0306942
Feature type
Associated gene
Evidence Rank
Length (nt)
9266
Evidence Score
Genomic Location
cDNA Clones Consistent with the Transcript ( 23 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        Sequence
        GTCGGAGTCAGCTGCTCCAATCGCCAAGTTAACTTAACTTGAAGATCGTTGGCACGGGGGGCCCTTATCCACGTGATCCT
        AATCAGTTTGTTGTATGTTTTGTTTCAATTTGTGCGTCATGCAGTCGGGATTGTTAACGCTGTCGACGGTTTGGGCTTTT
        TGAAGATGGAGCAAGGTGATCGGCGGGCGGGCGATGGCAATTAGCGGACTGAGTTCGTGTGGCAAGCACCTGAGAAACAT
        ATTGCCCGAAAAGTGATTGATAATCGTCGTTCGTAACTGCAAACAGAAATAACAAGACAAGCGAAATTTGTGTGCCTGAA
        GCGCTGGATGCGCCCCTACATCTGCCTCATGGAGCTGCCAATCAACCGACCTGGAAGCGGGAACCTGCTGCTGGGACTCA
        CCTCCGTGGTGGGTCTCATTGGAGGCGCCTATCTGCTGCAGTGTGGCGCCCAGCAGCTCTTGGGCAAACTAGCCAATAAG
        AAGTGGAGGAAGGAGGAGTCCAGCAGCGAGGATCACGCCTGCAACGTCTGCTGTGCGGACCTGGATCTGAGCAGTGCCAA
        AAACTACGTGACATGTTGCACCTGCGAAAAATCGGTTTGCCGCGGGCCTAAATGCGCCGACTGGCGGCCCAAGGACGCCA
        AGTGGGAGTGCCAGCTGTGCCAGAGCTCCAAGGAGTCGCTGGCCCACACCTCCTCGTGGGTGGCCGAGCAAATGTCCTTC
        AACCAGCATAAGTTTGTCTATCCGATGAGGGCTAGGAGCGAGGTGTATATACCGATTGTGGGCGATGGCAACGACAGCAG
        CATGCAATTCGAGAGCGTTAGCCAGATTGGACAAAACGCCCACATGGACGAACGGGCCAAGATCCGCGAGTACGTCGAGG
        AGATTGTGGCCGAAATGCTGGGCGGCAATTTGGACCACGTCAAAGTGGGGCAGCTGTCCAAGAGTGAGAACTACTTGCAA
        CTCTTTGATAAATTCCATGCGAAGCTGAGTAACCTGCTTATCAATGTGGAAAACAGTTTGTGCGCGCGTGCGCTCAGGGG
        AGATCTGCCGGCCATCGTAAATGGCCATACCAACAATAGTAATAATAATAATAACAACAACCATGCGGACTCCGAGCTGG
        CCGACCTCTCGCAGACCCGACTGCGCAGTCTCATCGAGACCATCATAGCGGAGACCCTGCGGAGCTCCACCCTCAGCGCC
        AGCGGAGCCGTCTCGGAGATCAGCCTGGACACCAGGTCTCACGTCTCCGATCTGGCCAATGGAAACGGGCTGAAGCGGCG
        CCATCGCACCGAGCACTACTTCGAGCCGAAGATCTACCAGGATCTGTTGGCCACAGCGGTGCTAAATAAGATTGTGGATA
        AGGAAGGGAATACAAGGCTGGCGGCGGAGAGTACGCCGGACTTGAGTGGTCGCCACATTGACGAGAATTTCAATGCCGAA
        GCGCTGAGCACCACGTCCGGAAGCTCCATTGAACCACGGAGTGATTGCAGCCTCACCGATCATGAAATCGGACTGGATAA
        TGGCAAATCCCAATCCCTGCAAACGGACTTGGAAAGGGAATCCGTGCTTAGTGACTATATAGCCGCACACATGGTGCCAC
        TGCCGGACTTTTCAGCATCCGTCACCGAATCCGAGGATGATATTGGATCCATCTCCTCGGGCATGATCGGAGATGGAAAC
        TGGGAGGACAACTGGCTGTTCAAGAAGAAACGCAGCTCGGCCACTCCGAGCAGCATTGGCATGCTGGTGCCGGCACCAAG
        GGAGAATGTACGTGCCCAGATTGGGGATAAGACCACCGACGAGGTGAGCGATCTCTCCGAGATTGGTTCGGACATCGAGG
        AGAGCTCTCTGGATCTGCTGCGATGCAATGATCTCAACGATCGTCTGCTCAGCAAGCACCTTATTGGTGGGCAAAACACC
        AAGATGGTCCTCGACGAGCTCGTAGATCGCACCAGTCTCACGTCCCACACATTGCCGGAGGAGAATGAGCCCGCATTCAC
        AGAGACAACCAATGAGTTTGTGGTATCCCCGATGGCCATGCCTTCTGATATAAAGGCGCCTTCTCCGACGCCACCTCCGC
        CACCAATGATATTCCAGGATGACTTGTTGAACGAGGAACCAGACCACACTCCCATCGCAGCCCAAGGCGAATCCGAGGAG
        CTGTCCAGCCTCGATGGCTGCACTGGCTTTAGCACAGTCGAGTACATCGATGAGGGCCAGATGCACGATACTGTGCCATC
        GGTGATCGAGATCTTGGCAGCCATGGCCCTGGGACCCATGCTAGCTGTTCCGGCATCTGAACAGCCCGGTGCCATGACAC
        CCAGTGAGATGCACACCCTCAAGGAACTGAGTGACTTGGCACTCGCCGAGATCAATGCTCGCACCGTGGACCTGGTGCAC
        GCCCACTCACTGGACATAATTGAAGAGGAGAACACGGAGCCTTCAGAAACTGGCCCAGAGCAGCACCTTGACTTCGTCCC
        ACATTCACCGCTCGAAGAGCTTGCAACTACTGACCAAACGGATGTGCTTCCACCTCCTCCACAATTAAAGCTTATATATG
        AGACTGAACCGCCGCCGCCTATAGAAATGGACCAAGATATCAATTGTATGGAACCTCAGTATACTGCAGCAATTGTTCCT
        GAATTAGAGATTCCAGGACAGAATGCGCCTGTGGAAATTGTTTCGCAGATGAAAGCTGATGATGTTACTCCTCTAGAGTC
        CGTGCAGATTGTGCCAGAAATAACACCTCCTACGGATATTGTACCAGAAGACCAATCTAACGTGGAATCAATTCAAGTAG
        CATCAACAGCAGAAGTTGTCCATGTGCCATTGCCTGTGGAATCTGGTCCGGAAATACCAGTGCCCTTTGAAATCGTCCCA
        GATCCCGTGGATCCACCAGAAGTTATAAATTTCGTTTCGCTGGACATGGAAACGCCAATGCCTTTGGACTACGATCCTGA
        AACTATAAAACTGGATCAAGGCCACGTAGCCAACTTGGTTCCAGGTGATCCCACAGCAAGTTTATCAGAACGAATTCCGG
        AAATGATTGCAGACCCCACAGCAGCGGCACTCCCTGAGCCTAGTCCCATACCTGTCCCAGTGGACAATGGTACACAATTG
        GATGAACTAGGAACTATTGAAGATGATTCACATACTACATCAGTCCCAATGGAAAGCGTTTCTATAGTGGAACCTCAAGT
        GCCTGTGGAAGCTGATGCCCTAACTCAATCTGATCCTGTGAACTTACTAGAGTCGCTGGATAATGTAGAGATTCCACCTT
        TACCAGGGCCAATATGTTCAGAGCCTGCAAATATTGCAGCCGATTCATCGCTACCTTTAGAAGCCGCAGAGCCCGTGGAA
        TCAACTCCTATAGAAGTTGCTACATTGGATTCACCACAATCTGTAGACACGGAACTACCAACGGCCGTGGAAAGTCTAGT
        CTCAGTAGGAATGCTTAAAGACGTCGAATCTGTCGATGTGAATGGCTCTGAAACTCTAGGTGTCAGTTTAGGAACTGACT
        CTATCGTAGTAACCCAGCCACAAGCTGAAGAAACTGTTAAGCCATCAGCTTCTGTGGAAATAGATTCAGAAAATCAAACA
        GTGGCACTAGTTGTCAATGTTCCAGAATCGCAAGAAATTTCAGAAGAAGCCGTATCGTCAATTGAAACGATAAGTCCACC
        ATTTTCAACTGAAGTTGCAGTTCCAGTAAAGTCCATTGACGTGGAAACTTTAGAGTCTCCAGGAGCTACAGAACCTGCCT
        CAGTTGAACAATCAGAGACCGTGGATATTGCTCCGGAAATACACAATGTTAACCCATCTGAGCACTGTGAATCGGTTCCT
        GAAGCGAATGTGAATATACCATCTATGGAAATAGTTCCACTCGAAAATAGCCCGTCCATGGAAATTCAAGACGAATTACC
        TCAAACATTGGAATCTAGTTCAGTGGATCCCCAAGAAGTACAGCCCGTTGCTGTGGATCCCTTACCGGTTACAGAAGTTG
        TTCCAGACGTAGTTCCTGTGGAACCCCCATCGATTGTGGAAACTGATCCAGAAACAAGGGAAATAGAAAACCTTGATCCT
        ATGGAAATTAAACCTGATCCAGAATCTAGCACAATAGAAAATCTGACACCTATCGATAGCTTAGCTGCAGTAGAGTCCAT
        CGATGTGAAAAACCAAATTAATTCGTCAAATCATATGGAACAGCAAAACATATCAATAGAACCACAACCGACAGTCCCAA
        TGGATACTATACAGCCAATTGAAATTGTACAAGAAGTACCATGTAACACAGTTGATTTGATAGCCACCACTGAAGCTGTT
        AATGCTGATCACTCAGAGCCTGGAGAAGCAGGTCTTATAAGCGAAGTACTGCAATTCCATAGTTCTGGAGGAGATCTCCC
        TGAAACGGACTCTCGCGCAATAGAACCATTACCATTGGCACCACCAGCGGAAGTGATCGAAGTGGTACCCCTAGGATCTG
        CAGAATTGCTGTCACCATCTGAACCTACTGAAGTAGTTTCTCCATCTGCTATTGCATTACCGGAAAAACCGGAGCCCATG
        GAAAATGCAACTGAAATTGAAATTGAGGAAATGGTATCCCCAACATCCGTGGAGATTGTTCCTACCACAACAGAAGATTT
        ACACCAAGCTGAATCCGTAGTGGAGACCGCTCGTCCCGTTTCAGCAGTAGAAGAAGTGAAACCCATAGAAGATTCAACAG
        CTGCTATAGATAAGTCACCACAGATATCACCTATTGAAGGAGAACATTCTCAACATTCGGAAAAGGAAACACCAGAGTCA
        GTGGAAGTGGGTCTGGACTCACCAAATGTGGCTGACGTAATAACCACGTCGGTTGAAGTAATTCCTACGTCTACGACAGC
        TGTGACTACATCAGATGGAGCATCAACCGAAATGCCTGAACCTCCTAAAATTTATTGTGAGACTGCACCTCCAGCAGCTG
        AAGAAATTGAACAGAACGAAACTGTAGAGACGCTATCGGTCTCTGCTGATACCACACTTCCTGAAGAAATTGTTTCTCAA
        GATGGGAATCTTGAAGCCTCAGAACAGACAGCATCAATAGATGTTACGTTCCAGGCAAACCTTAACAACATGGAATCTAA
        AGGATGTGTAGAAGTTGCTGTAGATGTTCGAGAATCTAAAGAAGATGAAACTCTGATGGAACCCATCGCAGTAGATGTTG
        CAGTACCTGTAGAAGTCGTTCCCCAATGTGCAGGTGTCGAATTAGGAGTATCAGAGCCAGAAGAAGCAACGCCTGCGACA
        AATAATTTAACTTCAGGTGAAAATCCACCAGAGGAAGTGTCAGAATTGGTGGATGTAGAACCAAGGAACCCGCATGAGGA
        AATACATACAGACTCCTTTGAAAAAGATTCCCAAAAAAGTTCTGATGCAGTGGCTTTACATGAAGATAATACGAAATCCG
        AGGAAAAAGTGGATCCCCCACAGGTTGCAGAAGAAGTTGCTCCAGACATAATTACCTTAGACCCCCCATCGCTTGTGGAA
        CTTAGCCCAGATACACAAGCAATGGCAATAGGAAACATTGCTCCTTTTGATATTATTCTAGAACCAGAATCCATCGTAAT
        TGAGCAACCGGTACCCGTGGTAAAACCAGAGACAATCGTAGTGGAGAGTGACCCTGAAGCAATTGATCATACAGCGCTAT
        TGGAACCATCAGTTTCTGCAGAAGTCCAAGATAAAGTTGAATCAGCACAGCAACAAGTTTCAGAGAACAAATCCGTCGAA
        GAGGATTCACTAAAAGTTAGTATAGGAGAAAGGGGAGAAATAATTTCAATGGATCCTATTACGCCTGCAGATGCGGTTTC
        TGAGCAGAATTTCCGCGTTGAGGATCCAATAACTTCTACTGAATCAACCGCAGTTGAAGTAATAGCTTCTGAATCCATCA
        ATACAGTGGTTGAACCAGTTTCAGTAGCTCAATCGCCAACTATTGAAGATTCAACGCCGGAGGAAGTGACTCAATGTAGT
        GCAGTGAATTCAACAGATACCGAAGTCGCATCAGCGGCCCCCATCCAAGTTGATCAAAAGATACAACCTGTTCATGTCGA
        ACTCGTTTCTCAAATCGAAGCTAGCGATCTACAAGAATCACCAAAAGATACGGCACAGGTCGAAAGTGATTCAGTGGATC
        AGGCAATCCTTACGCAAGTTTCAGAGACTGATTCTATAGTAGTGGAACCATCTAGTCCTGTCAAGCAAAGCGAAGATTCC
        CAAGGGGAACCACCAGGAAGTGCACAGAATGTGTTAGACGTAGGACCTGTTGAAATGGATCAATCGGCCCCTGAGGAAGT
        TCCTGAAACAGACCCTGTCGCAGTGGAACCATCTGTTCCTGTCGAGGAAGAAGTGATTGAAGTTATTCAACCGGCTCCTA
        AGGAAATTTCGGATTCTGTGGAGCGAACCTTAGATTCTTTAGGAAACACAGATTTGGTGGCAGAGGCGGAATCTGTAGAC
        ACTCCTGCAGAGAATGCAGGACCAGAAATAGGAACATCCGAGTTGGAGAAGGAGTTGTTGGTAGTATCGACGACCATCGA
        TGAACAACCATCGGCTGTTTTGGAGCCCTTAGTGTTGATTTGCCAAGCGGAATCTACAAATCTGGATCATGAACTACCAG
        AGAACCTTGTACCTCAAGGACAATCAGTTCCTGCATCGTTACCAACTAATTTAACCATACAAACACAACCTACGGACTTG
        GAGACTCAACCATCTATGGAACTTATTCTGCAAACGGAAACTGTGGATGCAGAAATGGTGAAACCAGTTGACATGGGGGA
        TTCAACAGTAGATAAGTCGCAGGAAACAGGGGAAATGGTTTTGAAATTGGAAAGCTCCAAGTGGGAACCTTTAGAAGCTA
        CTGAGTTAGTCACTATGGAGCCTAGTTCCGAAACGGAATCTACCTGTGCAGATTCCAAAATATATGCTAACTTGGTTCCT
        CAACTAGACTCAGTTCCTTTGTCTGTACCAACCGAGCTGAGAATACAACCCGAACCAGAGGAGCCGCATGCTTTTGAGAA
        CCCCATTCCAGAAACAGTTTCAAGCTCTGAGGACTTACTAGAACCAGCACAAGTTCTTATACAAGAAGATCCTGTCGCTT
        TGGAAAACCTACCGGGCGTGCCAATTGTTCCTGATGTACACGCCCATAATTTTGAACCATCTCCTGTGGAAATCACTTCT
        CAATCTGCGGATACAAACGCCATAGTTCCTGTGGAAGTGGAAACTATTATGAAACCAGAAACGGAAGCCCCATCGCCTAT
        GGCTGTTGAAAGTACTCCAGATTTAGAAGCTGTAGCATTGGACACTAAAGAGTCCGTACCTGCAGCACAAGCAATACCAG
        TGGAGGTTGTTCCGGAAACAGAACATCTCACAGAGGAAACCAAAAATGAGACGGCAAAAATGGATGCAGAACCAGCTAGA
        ATCTCAGTGGAAATTGTTCAAGAAGAACAACCTCTATCATTAGGAAATAAAATTCCGGTGGAGAATGAAACTTCATCCGC
        ACCGGTTGAAGCTCCTTTCGATACAGTATCTATTCCAGCGAGTGTGGACAGCGTGGAGCAAAAGGAGAGTAACGCTAGTG
        AAGAACCGCACTTTGGTGAAGATATTTTAAAGAACGATGATGCAATATTAGAAACAGTAACTGCGAATGCCGATTTATCA
        AGCGATGCCCAACTAGCCAGTATAGACCAAGAATTAAAGGATCCGGCAACAGAAGGTTCCATTGCGGAACGCGAGGTGAA
        GAAGTGGTACAACGCCGTTGAAATGCCAAATAATCCGTACTCCCCGGAGGCCCTGAAGCAGCGCATCAGCGGCACCCAGG
        AGCGCTACATGGATGTGCCCAACATCAGTCCGAGTGCTGAGCAAAAGGCACTGGCTTCGGCGCTGACGGAAAATCCGGAT
        CCGCCAGCGCCCAAAGCGGATTATAAGCGCTATAGCCGCGACTACTACATCAACAATGCTCCCACATCCACTGACAGCAC
        GGGGGGTGGAAAGGCCGCCACAACCAGCGCAGGCGAGGATGTGGAGGACATCGTGATCAACGAGGTAAATCAAGAACCAG
        AACCACATCCACCGCATGGCCGCATTTCAAGTGGCGCTCAGAGCACCGCTGCCGACCTCTCTCATTGGACCCTATCCACG
        CCAGTGCGACGCAGTAGCTCACTAAAGTTCATTAACAGCCGCCCCTTCCACTCCCCCTCCCCCTCGCTGGGCTACGAGAG
        ATCGGTGCCCCTCGAGCGACCTTCGACCTCGGCGTCCCATTACCGCGAATCGAGTCTGGGTTTGGGTGACGACGACGACT
        TTGACCTGAGATCGCAGCGCTCCTGGCGGAGCAGCTACAGTTCACTGCCCAAGCGACACACGCAGTCCTCGCTAAGCCTG
        CACAGCAATGGTAGCGGGGTGTCCTTTGGCTCGTCCGTGTCCAAGAGACGTCCAGCGGCAGGTGGGCCCTCCGCCGGCGT
        GCTCACCCAGTTCGAAAAGCAACTGCTGCACAAGGACCTCAAGCGGAATAGCTTCCGGGCGGTGTCCGCCACATCCAAGG
        ACTTTGTCATGAATCCGCTCTTCGAGAGCGAGCCGCTGGGCGAAAAGCCGGCCCTGCGGCCGGAGACGGAGGACCAGGGT
        GACTCGGGGGTGGACAGCTGCCTGAACGGCTTCAGCGGTGCGGACGCCAAGTACAGCAACAATAGTCTGCTATTCTAGGA
        GCTCTGGGGATCATTTTGGTCTTAGGCCCCACGATATTTGCCAAATTACGCATAGCTTAGTCAAACAAACAGATGTTAAA
        CACTAGTCAGTATAGCAAACCCAATTTCTCTGTACATAGCAAATAGGATGGGCATCGGCGGGAATAGAAATTACGAAATT
        ACAACAATATTGAAACACGGGAAATTATGAGGCAGGCACAGAATCTCCCGCACTGGAGGGGCAAACGATTCCGACCTTTC
        CACTGCACCAGCACCTGTTGCACCAACCACGCCACGCGAATGAGAGGATCGAGCTAGTGTTCTGATCGTAGCTTTAGTTA
        ATACCACTTACGTAATGCTAATGCCCTAGAGTATGCAACGTTTGTTTTTAATCATTATACTTGCTGTTAATTTTATGAAA
        TAATATGATAAATCCTGTACCGTATCTGTATGCACACCGCTAACGCTCTTTCCAACGAAACACCATACACATATGCCTAG
        CGATATCTAGAAATCTAGAAATCTATAATGCAGTAATTCCAAATAAAGCCAAACAATAAACCAACC
        
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        FBtr0306931
        3681
        FBtr0306933
        3851
        FBtr0306932
        3947
        FBtr0306934
        3012
        FBtr0306935
        3544
        FBtr0306937
        3384
        FBtr0306936
        3976
        FBtr0306938
        3941
        FBtr0306939
        3248
        FBtr0306940
        3181
        FBtr0306941
        10517
        FBtr0306943
        9424
        FBtr0331951
        3585
        FBtr0331952
        8164
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        FBpp0297795
        2796
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        FBpp0297784
        983
        FBpp0297786
        938
        FBpp0297785
        1020
        FBpp0297787
        723
        FBpp0297788
        983
        FBpp0297790
        847
        FBpp0297789
        1020
        FBpp0297791
        968
        FBpp0297792
        723
        FBpp0297793
        723
        FBpp0297794
        3213
        FBpp0297796
        2893
        FBpp0304284
        901
        FBpp0304285
        2544
        Comments

        Transcript terminates at site supported by polyadenylated cDNA.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        CG43340-RN
        Secondary FlyBase IDs
          References (0)