A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Transcript Dmel\lid-RE

General Information
Symbol Dmel\lid-RE Species D. melanogaster
Annotation Symbol CG9088-RE FlyBase ID FBtr0307071
Feature type mRNA Associated gene Dmel\lid
Evidence Rank Strongly Supported Length (nt) 6941
Evidence Score 11
Map ( GBrowse ) GBrowse View Help detailed view FBtr0079179 FBtr0332599 FBtr0079232 FBtr0307070 FBtr0079231 FBtr0307071 FBtr0307069 FBtr0307300 FBtr0113024 FBtr0332600
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide cDNA Clones Consistent with the Transcript ( 86 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the
annotated transcript,
internally consistent
End(s) extend beyond
the annotated transcript,
internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the
annotated transcript,
internally consistent
End(s) extend beyond
the annotated transcript,
internally consistent
hide Sequence
GGCAGATCGACGTTTCCGGCACTTCGACGACGGGTCACACTGGACACATG
TAGCAGGAAAAAACGCAGACATCGGAGAAAGAAATCAGAAAAGTAAATTC
GCATTAAAGCCACCTCGCCAGTGCCGTGCTCGGTGGTTTTATGGAACACT
CATTTCGATCACATACCGAGCGTGCGCGTCTTCCAACGACTTCCTATGAC
GACAAACCGAGCGGAATAAATTTAATCTGAACTCATCTTAAAGCTATGTC
CGCCAAAACTGAGGCGGACAACACGACGGCCGCCAACTCCGGCGGCGGAG
GAGTCGGGAGCGGCACCTCATCCGGCGGGGGCGCATCCGCGAATGGAACA
GCAACTCCGGCACGTCGTCTGCGTACCCGAAACTCAACGGGCAACGGGAC
TAATAGTGGAAGTGAGTCCGTAAAGAAATCCAATGCTAACGACGAGCCCT
CGACCCCAGTCACCCCGGCAGGAGCAACAGGATCTCACACCCATGCTCCG
CCAGGCATTTCTCCGGCGGTAATGGAACGGCCTATGCCCAGTGTTCCCAT
GAATCACGCCAGCAGCAGTGTGTCAGCCAGCAAAAAGTACCATAATAGTT
GTCCTCATCCCACGCCCACGCCTGCGCCCACTGGGCACAAGAAGTCGGTC
CACACGCAGCCGCACAGCAGCAACAAGTTTGACCAGGGAAAGAACGAGGA
GTTCCACTTTGACACGCCGCCAGAGTGCCCTGTGTTCCGGCCCACAACTG
AGGAGTTCAAGAATCCACTGGCCTACATCAGCAAGATCCGCTCCATAGCT
GAGAAGTGTGGAATCGCAAAGATCCTGCCGCCGGCAACCTGGTCGCCGCC
GTTTGCAGTGGACGTGGACAAGCTACGCTTTGTGCCACGTGTCCAGCGGC
TGAATGAGCTCGAGGCAAAGACGCGCGTCAAACTCAACTTCCTTGATCAG
ATCGCAAAGTTCTGGGAGCTGCAAGGCTCTTCACTAAAGATCCCAATGGT
GGAGCGAAAGGCTCTCGACTTGTACACACTGCACCGCATCGTTCAGGAGG
AGGGGGGCATGGAGCAAACCACAAAGGATCGCAAGTGGGCCAAGGTGGCC
AACCGGATGCAGTACCCCTCAAGCAAAAGTGTTGGCGCAACCCTGAAGGC
ACACTACGAACGCATCTTGCACCCCTTTGAGGTATACACTTCGGGAAAGG
TTCTAGGACCCACACCAACGTCGTCTGGATCTGGTAGCACACCCGTCAAA
TTGGAGGACGGAGGTGGAACCGATTACAAAGCCCATGAAATTCCCACACG
GCAGCAGATTGCGCCGCCCAACGAGACAAACACACGTCGCTCCAAGCGTT
TCGGAAATTCCAATGCCAGCTGCGGCCTGAGTGGTGTTACACCCACAACA
AAGCCATCAGCGGGCGTATTTGTCAAGACGGAGACCAAGGAAGAATTTAA
GAGGGATCTTCTCAGCAGTTTCAATGCTGTCAACAGCGGCGGATCGCCAT
TAGCCACAGGTACTACGGCAAACACTCGCGGAGCCAGCCAGAAGAAGGGA
GGAGAGCCTCCAGCACTTATCGTAGACCCACTGATGAAGTACATTTGCCA
CATCTGCAATCGCGGCGACGTCGAGGAGTCAATGCTGCTTTGCGATGGCT
GCGACGACAGCTACCACACCTTTTGCCTGTTGCCGCCTCTGACCAGCATA
CCCAAAGGCGAATGGCTTTGCCCGCGCTGCGTCGTCGAGGAAGTAAGCAA
ACCGCAGGAGGCGTTTGGTTTTGAACAGGCAGAGAGGGAATACACTCTGC
AACAATTTGGACAAATGGCTGACCAGTTCAAGCAAGAATACTTCCGCAAG
CCGGTGCACTTGGTGCCCACTGAGATGGTGGAGCGCGAGTTTTGGCGCAT
CGTGTCATCTATCGATGAAGACGTTACCGTTGAGTATGGGGCGGACTTGC
ACACAATGGATCACGGCTCTGGTTTTCCCACTAAGAGCTCGTTATATTTG
TTGCCGGGCGACCAAGAGTATGCAGAGTCAAGCTGGAACCTTAACAACTT
GCCGTTGCTGGAGGATTCCATTCTTGGTCACATCAATGCCGACATTAGCG
GCATGAACGCTCCGTGGATGTATGTGGGCATGTGCTTCGCAGCCTTCTGC
TGGCACAACGAGGACCACTGGAGCTACTCCATCAACTATCTTCACTGGGG
AGAACCTAAAACCTGGTACGGTGTTCCGGGGTCCTGTGCTGAGCAGTTTG
AAGAGACCATGAAGCAGGCAGCTCCAGAACTTTTTTCATCACAGCCCGAT
CTGCTTCACCAGCTGGTGACCATTATGAACCCGAACATTTTGATGAACAA
TCGTGTACCGGTATTCCGAACCGATCAGCATGCAGGCGAGTTTGTGATCA
CCTTTCCCAGGGCCTATCACGCAGGCTTTAACCAAGGCTATAACTTCGCG
GAGGCCGTCAATTTTGCACCTGCCGATTGGCTGAAGATGGGGCGCGAGTG
TGTTAACCACTATTCCATGCTGCGACGTTTCTGTGTCTTTTCGCACGACG
AGCTCGTTTGCAAGATGGCCCTGGAGCCAGCGAAACTCACATTTGGCATC
GCTACTGCCTGCTACATCGACATGGCCGAAATGGTCGACACGGAGAAGAA
ACTGCGCAAATCGCTTTTGGAGTGGGGCGTTACCCGCGCAGAGCGTCGCG
CCTTCGAGCTAGTAAACGACGATGAGCGCCATTGCCAAGAGTGCAACACC
ACGTGCTTCCTGTCGGCGGTGGCCTGCGAGTGCAACGACAAGTTGATTGT
CTGTTTGCGCCACTATACGGTACTCTGCGGCTGTGCTCCTGAGAAGCACA
CTCTGATATATCGTTATACACTGGACGAGATGCCGCTGATGCTGCAGAAA
CTTAAGGTGAAGGCGCACAGCTTCGAGCGATGGCTTTCACGTTGCCGTGA
CATAGTCGATGCACATACACCCACCTCGGTGACCCTGCAGGAGCTGCAGG
AATTGTGCAAGGAGGCCGAGACGAAAAAGTTTCCCTCCTCGCTGCTCATC
GATCGCCTTAATGCTGCGGCCGTTGAGGCAGAGAAATGTGTCACAGTCAT
ACAGCAACTGGGTATCAATAAGGTGCGAACTCGCTCGGACCACAACCAGG
AGGCTGCTCAGTACAAGCTAACCATGGAGGAGCTAGAGTTGTTCGTTCAA
GAAATCGATAATCTCTGCTGCATCATTGACGAGGGCGCTTCGGTGCGAGA
GCTGCTTGTTTTGGGAAAACAGTTTGTGGAGCGGTCCGAGAGCCAGCTGC
AATTATCGCTGGAGTCTCTGGAGGAGAGTGAGCTGGAAACGTTAATAAAC
GAAGGCAGCTCCTTACGCATCGAACTGCAACAGCTCGACCTACTGCAAAA
GCGACTGAAGCAGTGCAAGTGGTACAAGCGCTCGCAGGGATTGAGGGAGA
CCAGCTCGAAGCTGACCTACCAAGACGTGAAGAACCTGTTACACATTGCG
GCTGCTGACCTTGATCCCACGGATCCGTATGTCGACAAGGAGATGCGAAA
ATTGCAACAGATCGGTGCAGATATCGAAGCCTGGGAGTCGCAGGCGGCCA
AGTATTTCCGGCGACTGACCCAACAGCACGAACTGGGCGAAATTGAGCAG
TTCTTGAAATCGGCCTCCGACATCAACGGTCAAGTGCCTTCGCATGGACT
GCTGAAGGATGCACTACGAAAGGCGCGTGAGTGGCTACGGGCCGTTGAGC
AGCTACAGCAAAACAACCACGTCACATATTGCCACACACTGGAGGCAATG
ATCGAGCGCGGCTTGAACATACCCATCCAGCTGGAGGAGCTGAGCCGAAT
GCAGGGACACCTAAATAGTGCACATCAATGGAAGGACAATACAGCGTGCG
CCTTCCTCAAGAAGGGCACCTTCTATACGCTCTTGGAGGTTCTCATGCCC
CGGTCGGACGCCATCAACATAGACTCGGATCTCAAGCCGCGCTTCCAGGA
TGATTTTCTGAAAGAGAAAAATCCGGCGGAGATTGTGGCCAGCTTCAAGC
ACGCTGAGGAGCAGGAGCTGCTCGATATGCGCGAACTTCGGCGGCAAAAT
ATGAACAAGAATCCCATGCGCGATATGTTCTGCTTGTGCAAGTCCGAGTT
CCGAAACTTAATGTTCAATTGTCAGTTGTGCCGCGATTGGTTTCACGAGG
ATTGCGTCCCACCGCCATCAGCCACAAATCAAAATGGAATTGTTAACGGC
GGATCAGGACCAGGTACCAATCGACCCAAGTGGCTATGTCCGAGCTGTGT
GCGCTCGAAGAGACCGCGCCTAGAAACCATCCTTCCGCTACTTGTCCAGC
TGCAGCAACTGCCCATCCGTCTGCCCGAGGACGAAGCGTTGCGTTGCCTG
GCGGAGCGTGCGATGAACTGGCAGGATCGGGCCAGGAAAGCTCTTAGCAG
TCCTGACGTCAGTGCGGCTCAAGAAGCGATTATGGCGCAGCAGCAGCAGA
AGCGGCGCTCCGAGGGTGGAGCAGGGGTGGGAAATATCAGCAGTCCACGG
AAGCCACGTCGACGGGGGAGCCTGACGAAAGAGGCAAGTGGTTCAACAGA
GTCCGATGCCGACGACGATGACGACGAGGACGAATGTCGTCTTCGAATCG
TCGAAGACAACTTTAGTAACGATGAAGATGAGCCTCGTACCGCCCCCGCG
ACCTCCACCGTCAACTCCGATCTCCTCAAGCTGCTGTCCGACAGTGAAAT
TGAAAATTTGCTTGACCTGATGATGGAGGGCGACCTGCTAGAGGTATCCT
TAGATGAAACGCAGGAGCTGTGGCGCATTCTAGAAACGATGCCGCCCACG
TTGCTGCAGGCGGAGGCCATGGAGCGTGTTGTCCAGTACATGCAGCGTCA
GCGGCAACAGCATACAAATCCGCTGCCAACATCCGGCGCCGAAGACTCTA
ACGATAGTCTGATGGTACAAAATAGTCCCAATAGCAACAGCAATAGTGGC
GGGGCAACGGGTTCTGCGAGCAACAGCGGACGCAACAAGAAGAGGCGCTC
CAACGACACCGGCGGCAACTCGGCAGTGCCGCGCAAGAAGCAGAGCACAC
CGAAGCAGACACCGGGCAAGAAGGGATCAGCGGCAGCGGCACGCAAGAGC
GATGCCAAGGCATCGCCAGCAGCATCCACCACTCCGGGTGCGGATGCCGA
TGCCGAGAATAAGCAGGCCAACGGCGGTAATACGAACTCCAGTACAGGAT
CAGGTGGTGGCAATTCTGCGACGACGACGCCCACACCCGGCTCGACGCAC
AAAAAGCGAAAGCGCACCTCAACCACAGCCACCAATAATAACAACAACAA
TAATAATAACAGCACGAACAATAGCAACAGCAGTACCAATTTGAACAGCA
ACACCACCAGCGGCCAGGGAGCAGCTACTGGAGGCAATAATGCGACTGGC
GGTCAGAAGAAGCACGCGCAACGGTCTCAACAGGCGGCGCAGGAGGACGA
CGAGGAGGAGTGCCGGGCGGAGAACTGCCACAAGCCAACCGGGCGAGAGG
TGGACTGGGTGCAGTGCGACGGCGGCTGCAACGAATGGTTCCACATGTAC
TGTGTGGGCCTCAATCGCAGCCAGATAAAGCCCGACGACGACTATATCTG
CATTCGATGCACAAAGACAGTTGCCATCGGAACACAGGGCTCCGGTCACA
GTATGAGCGTGGCGTCCACGACGACGCCGGGCAAGCAGCGGGCGGTGCAA
TCGGCGCGGTAGAGTAACGTATATAGAGTCCAGGAGGTGCAGTAACAGCC
GATTGTGTTTTACGCATGATGTACTACTAAATACCCGATAAAGGCCGTCT
ACCGGTATTTACTAAGTTTAGTAAAGTCACTTGAGAGTTTTTGTAGTACA
TATTTACCAATTATCGCTATATTTACGCATTAACAACGTAAAACACATTT
GAAAGAAAACGTCAGAAAAAAAAAAGAAAAGAACTACAAAAAAGAAAACA
GAAGAAAAATAAGAATCGAGAATAGGGATTAATAATTAAGCAAAAGATAT
GAAATGCAAACAAAGCAACACAACTATTTGTTTTTGTACAATTCAGCCCA
TTTTTACGTTCGTTAAACGTTCTTTTAATTTTATAATATATTTTACCATT
ACCTGCTATTCTTAGTTTTTGTTAATTTAATTCACTTTTTGTGTTCGCCT
CTCGAGTTTTGGTTCAGTGCGCACGCAAAGTTTTCTTACGTTTTATTTGA
CTTTTTCCTTTAATCAAAGGCGAAGGCGACTCTCGTTTTACTTTTGTACA
TTTTTGTTTACTTAAGGTTGCGAGCAAAAACCCTCAAACATTAAGAATCT
TCCACTTTTACGCGTGGCGCCTTGTAGACTCTCCCTTTCTTTGTATGTTC
TTGTTTATTGCCCCAAATTAAAATATATAAAAAAGAAACAAAAAAAAAAA
CGAAAACAAAATCCTGTTAATAAAACGATCATACAAAAACTAAAATTCAG
TATACATTTAAGTTTACATTTAAAATACAATGAAAAGTGTATAATTTTTA
ATTTATAATTAGTAAGTTGACTAGAAATCCAACAAACGTGGAAGTAAAAA
CAAATTACAAAAAAAAAACGAAACAAAAAAATTGCAAAACATCTTGGTAA
TATTAACGTACAACAATAAACACAGTGCTTAGAATTATGCAATTGAAAAA
GCAGACAAAAAAACGAAAAACACTTTGTAAAATCATTTTTTAAATGTGTA
TAAAAACTCAAGCTGACAAATGTGCAGGTTCTAATTGCAAGCAACCCAAG
ATAAACGTTAACGGAAACAAAACAGAGCCCTAAACATATTAAGGATAACA
CTTTTATTTCATTAAGCAGTAATGTACGATTGATTTCAATGAATGATCCA
AAAATATAAAAACATTTTCCCTCACGATACCTTCCCCCAAC
hide Other Products of this Gene
Other Transcripts
Name
FlyBase ID
Length (nt)
FBtr0079231
5963
FBtr0079232
5831
FBtr0307069
5851
FBtr0307070
5841
 
Polypeptides
Derived from
THIS transcript
Name
FlyBase ID
Length (aa)
FBpp0297914
1838
 
Derived from
OTHER transcripts
Name
FlyBase ID
Length (aa)
FBpp0078862
1838
FBpp0078863
1838
FBpp0297912
1838
FBpp0297913
1838
 
hide Comments
  • Extended 3' UTR based on EST and RNA-Seq data.
hide External Crossreferences
RefSeq - An integrated, non-redundant set of sequences
hide Synonyms
lid-RE
 
hide References ( 1 )
FlyBase analysis
FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome.
Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453]