Transcript Dmel\Pfrx-RJ

General Information
Symbol	Dmel\Pfrx-RJ	Species	D. melanogaster
Annotation Symbol	CG3400-RJ	FlyBase ID	FBtr0307192
Feature type	mRNA	Associated gene	Dmel\Pfrx

Evidence Rank	Strongly Supported	Length (nt)	3061
Evidence Score	15

Map ( GBrowse )
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 61 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent	MIP03150
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	17756 18771 19282 28076 28485 31017 39796 51035 51443 54823 65957 99543 106343 190870 214249.60 214441.64 CK01.12B.D7 CK01.32D.F12 CK01.51C.F4 CK01.100B.B8 EC30623 EK013616 EK028154 EK040854 EK088928 EK100703 EK130343 EK132323 EK133721 EK135742 EK136421 EK161908 EK162113 EK180723 EK193343 EK215002 EK222317 EK236012 EK293059 EP15064 GH01144 GH07165 GH20981 GH26943 LP17447 RH46869 RH54623 RP004068613 RP004069446 RP004085188 RP004122183 RP004125481 RP004250528 RP004267368 RP004309640 RP004314052 RP004445470
End(s) extend beyond the annotated transcript, internally consistent	59040 CK01870.3prime EP04707
Sequence
	TTGTTTTTAGTTTCGCTCCACTCTGCCTTCTGTATTCATCGGGTGCATTT ATTGTTATCGGTTTCTCTTCCAGCAAAGTCGGTAATCGCTGCGTGTGCCT CGATTCGTAAACGGTAGTCCCGCTATAATCGGCTGAGCTGGCAACCCTGA TGCCATCGAACTGCACCGAGCACCAAACTATCGATAACGAACACAGCAGA AGGAACAGCTGATCAGCCCCAAAAATCACAGAGAGAAGGCGAAGTGAAAG GAGCATCATCAGAAGCCCAACGAACAAAAGCAAACCCAAACCAGATACTT TCAGCCAGCAACAGCAGCTCAATCGACGAGCAAGACGAGGATCAAGTAGG AACATTGCCATTGCCCCTGCTGTCCATCAATAGAAGGACACCCACCCTGC TCCCCCGCCCCGTTCCACCATCATCGACCCGATTCACATCGTCCTACAAC GACGACCTGTGCACGTGCAGCAACTGCGCGTACTCCAGTTTCTCATCCTC CTCCTCCTCCGCCTCGTCCACATCCTCGTCATCCACGAGCGCTACAGCAG CAGGAACAGCATTAGCATCAGCAGCCGCATCCGCCGTTGCCAAGAAGCTA GCACGCTCCGTGACCGCCACCAGCATCATGGACATGCCGTACAACACCTC GCCGTCGCTACGCGTGCGCACCACCTCGCTGAATCAGCTGAAGAAGACCG CCGACCTGGCCATCGAGAATGAGCTGCACGTCTGTCCGTCGGTGATGTCC GAGGAGCTGCGCAAGCTGCTGCCGCCCACCTCGGAGACCGTGATGACCAA ACCCTTCCCCATCCGGGGCGAACGGACCATTGCCGACTGTACCACGCCGC ATGTGATCGCCATGGTTGGCCTGCCGGCGCGCGGCAAGACCTTTATCTCC AAGAAGCTAGCGCGCTACCTCAACTGGATCGGAATCTCCACGCGTGTTTT CAATCTGGGCGAGTACAGGCGTCATGCAACCACAGCATACAAGTCGCACG AGTTCTTCCGCGCCGACAACGAGGAGGCGATGGCCATCCGCAACCGGTGC GCCAATCAGGCGCTGCACGACTCGTGCGATTGGCTGCTGAGCGGCCAGGG AAGCATCGCCGTGTTCGATGCTACCAACTCTACGCGCGACCGTCGCCAGC TGATCCACGACATTGTCGTGAAGCAGCATGGTTTCCGCCTGTTCTTCGTC GAGTCCATTTGCGACGATCCGCAGATTATCGAGCAGAATATTCTGGAGGT AAAGGTCAGCTCACCAGATTACCTTAACATGAACACGGAGCTGGTGGTGC GGGACTTCCTGCAGCGCATCGAGCACTACGAAGAGCGCTACCAGCCCATC GACGAGGTTACCGAGTCGCACCTCAGCTTCATGAAGGTGTACAACGCCGG CAAGAAGGTGGTCGTCTACAATAACGAGGGTCACGTGGAGTCGCGCATTG TCTACTACCTGATGAACATCCACATTACGCCGCGCACCATCTACCTGACG CGTCACGGCGAGAGCGAGTACAACCTGAGCGGGCTCATCGGCGGCGACTC GAACCTGAGCGCCCGTGGCCACCAGTATGCCAATGCGCTATCCACTTTCA TCGCCCAGCAGCAGATCGACGGTCTGCGCGTGTGGACGTCATGGATGAAG CGTGCCATTCAGACGGTGGCCGATGTGAAGGCGCCGCAGGAGCGCTGGAA GGCGTTAAACGAGATCGATGCCGGTCATTGCGAGGAAATGACGTACGAGC AAATCAAGGAGAAGTTCCCCGAGGAATTCAAGGCTCGCGACGTTAACAAG TTCGCCTATCGCTATCCGCGCGGCGAGAGCTACGAGGATCTTGTGGCTCG ACTGGAGCCGGTCATCATGGAGCTGGAGCGACAGGGCAATGTGCTGGTTG TTTCGCACCAGGCGGTGCTGCGCTGCCTCTTTGCCTACTTCCTGGACAAG TCCGCCGACGAGCTGCCCTACCTGTATGTGCCGCTGCACACGGTCATCAA GCTGACGCCGGTGGCCTACGGCTGCAAGGTGGAGCACATCAAGTTGCCCA TCGATGCGGTGGACACGCATCGTCCCAAGCCTAAGATTCCCGGCGACGTC AGTGAGCCAGGACTGGATGGCCTCAGCGGCGAGCTGGTGGCACCCGATGG CGTCGGCAAGGTGCTCATTGTGGGTGACGATGTGGCGACGGCCACGAACG GCAATGGCGGGCGCGTCGATGTCCAGGCGCACCAATGACGGCGTCGCCTG CACCCCGTGCATCCACATCCACCTCCGAAATCCAAGACAATCTAAGCACG GCTGCTGGAACGGCTACGGCTGCCCCAACCTCCAAGACACTTGCCCGCCA ACCCCGCCCCCCCAAATCCCAGAACAGATCCCGCACTAATTCTTCCCCCA GCGCATCCCGGACAGCCCAACTGAAACGGACAAAGACACGGACGTGGTCA TGCGAGGGCAACACTGACAACTGCTCCTGCACCTGCTCCAAGGATGTGGT GGCATCTCTACTTAACGTGGCGTCGAAGGACTGCGTATGAAATTGTGATT GATCCATTGTGCTGTTTTATTATGTACTTTAATGAACGATTAAATATTTT TAAAATTTTCTAGAACATCTATATACTTTGATAAAAGCAAAATACAGACT TAAACACCTATCTAGATTTACACAATACACACCTTCTCCTGTAAATGGAG AAGTCCTGGCTTGATTGATTCAATGTGATTAGTTACCCCTGGCTTCACAT GCAGGCGGTTGGCATACCGCATGCTGAGTGCTCCAGCCACTAAAAACTTG ATTGATTCTAACGCTGTATACTTAAATGTGCTCTAATCTAATTCGTTGTC TATTTTTTATAACCGTTTTGAGCGAATTTTATAGCTAAGCGAGAGGATAA ACTCACGGATTCCATTTGCCAACTCTGTTTAACTGAAACCACTTGCCCGA CACACTTTTTAGCCTATGTATATGTTGCTTGTAAATGTATGTGTGGAATA AATATTGTAACTACAATACATAAATACTATTTCAAATAATCAACAATAAA TACAATTTATC
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) Pfrx-RA FBtr0074714 2981 Pfrx-RB FBtr0074717 3376 Pfrx-RD FBtr0074719 2983 Pfrx-RE FBtr0074720 3193 Pfrx-RF FBtr0074713 2912 Pfrx-RG FBtr0074716 2930 Pfrx-RH FBtr0074718 2980 Pfrx-RI FBtr0074715 2978 Pfrx-RK FBtr0307193 3197 Pfrx-RL FBtr0307194 3383 Pfrx-RM FBtr0339439 3031 Pfrx-RN FBtr0339440 3373
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) Pfrx-PJ FBpp0298021 536
Derived from OTHER transcripts	Name FlyBase ID Length (aa) Pfrx-PA FBpp0074483 536 Pfrx-PB FBpp0074486 716 Pfrx-PD FBpp0074488 536 Pfrx-PE FBpp0074489 536 Pfrx-PF FBpp0074482 536 Pfrx-PG FBpp0074485 716 Pfrx-PH FBpp0074487 536 Pfrx-PI FBpp0074484 536 Pfrx-PK FBpp0298022 536 Pfrx-PL FBpp0298023 536 Pfrx-PM FBpp0308526 536 Pfrx-PN FBpp0308527 715
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_001258821
Synonyms
	Pfrx-RJ
References ( 1 )
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453]