Transcript Dmel\cnn-RI

General Information
Symbol	Dmel\cnn-RI	Species	D. melanogaster
Annotation Symbol	CG4832-RI	FlyBase ID	FBtr0309888
Feature type	mRNA	Associated gene	Dmel\cnn

Evidence Rank	Weakly Supported	Length (nt)	1769
Evidence Score	3

Map ( GBrowse )
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
cDNA Clones Consistent with the Transcript ( 17 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	AT01813 AT02338 AT03776 AT07160 AT08521 AT10189 AT11012 AT16195 AT16926 AT21245 AT24444 AT24876 AT25401 AT27480 AT29219 AT30815 bs12c07
End(s) extend beyond the annotated transcript, internally consistent
Sequence
	CCGTTTTGGCTACACACACGAGCATTAGCACATTTATTCGGCCGCACTGT TGGCGTTTTATATTTTATATGTGGTTGCTCCCTAACGGCTAGGAGAAAGC TATAAAATCATGAATAGTAATCGAACGTCGTCTTCGCACAATTCGAGAAA TCTAAAGATTCTTAATGCCAGTTTTGACGTTCCACGACCTCCAGGCGGCG GCAACTCGCCCTTGCCGTCACAGGGTCGCTCTGTACGCGAATTGGAGGAG CAGATGTCCGCGCTGCGCAAGGAGAACTTCAATCTAAAGCTGCGCATCTA CTTCCTCGAGGAGGGTCAGCCGGGTGCCCGGGCAGACAGCTCCACAGAAT CCTTAAGCAAACAGCTCATCGATGCCAAGATCGAAATCGCGACATTGAGA AAAACTGTCGATGTAAAGATGGAGCTGCTCAAGGATGCCGCTCGAGCCAT TTCTCATCACGAGGAATTGCAGCGCAAAGCAGACATTGACAGCCAGGCAA TAATCGACGAGTTGCAAGAGCAAATACACGCCTATCAGATGGCGGAGTCT GGTGGTCAACCTGTCGAAAATATTGCCAAAACCAGGAAAATGTTGCGCCT TGAATCGGAGGTGCAGAGATTGGAGGAGGAACTGGTGAATATCGAAGCTC GTAACGTTGCAGCCCGGAACGAGCTGGAATTCATGTTGGCCGAGCGCCTA GAATCCCTAACAGCCTGTGAGGGCAAGATTCAAGAGCTGGCCATCAAGAA TTCCGAACTGGTAGAGCGTCTTGAAAAGGAAACAGCATCCGCCGAGTCAT CCAACGAGGCCATAGACTCTCTTAAGGTTGAATTAGAAGCCTGTAGGAAA GAGAATCAGGATCTGGTGACCTCCATTCGAACCTTAAAACATGATATGAA GCGACAAGTCCGCTCGATGAAGGAGGCCGCCAATACGATGGACGTGCAGC GTCAGTCCATCCTGCTCTTGGAAGCCACAATCAAGCGCAAGGAAAAGTCG TGCGGAAGTATGCAGAAGAACGTGCTAAACTATGAGGCACTGATAGCCAA GTTAAACGCCGAACTGGAGACTATGAGGCAACAGAATGTTTACTTCCGTG AGCTCTCCGAAAACCTACAACAGAAGGAGGTGCGGCAACTGGATCGCGGC GTGGCCATCGTGCAGCCGATGCGCATGACGGCGGATGCCGGGCGTTTTGT GTGGCAGTCAGGGACCATCGTCGCACAAGAGCCTTTGCCATTGGAAAGGC AGTCAGGTGAAGCACTTACCATCCAGCGAACAGTGTGGTCAGCTCCTAAA ACGTCGTCGTCCACAGCTGCAGCAACAAGCAACGTATCCGTGTCCGCAGT ACGTTTATCATCAGGGCCACCACCAGACCAGACATACCCAGTTAATGGCC ATGACCGCGCCAAGTACGGCCTTCTACAACTATTCGCTGCCAAGCTTGAC TGGATTTCGGCAGTTCCTTTGGCGCTGGGGCACTTAGCCCTCAAGATCAT CCTCTTGGCTATGCGGTTGCACTCCTGCCTCCAGAATGTCCATATCCCTC TTAGGGTGTCCTTTGAGCTGGGGCATTCCATGCCGTTGGCTGGCATTCTG TACTCTATTTGATCATCATTTGATCGTTCCGCTTTCGTTGATCGTTCAAA GAAATCCAATCAAATGAATCCGATGTTGTCCATATTCTATTAGAACAATG TTGCTCTCTCAGACGTCGACAAATTTTTTGTTAAAGTGTATTAAATTTGC TCACATATCCCCCCGTCTG
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) cnn-RA FBtr0087703 4322 cnn-RB FBtr0087704 4621 cnn-RD FBtr0100654 4140 cnn-RE FBtr0100656 4651 cnn-RG FBtr0301395 1709 cnn-RH FBtr0306635 1824 cnn-RJ FBtr0309889 4830 cnn-RK FBtr0309890 2006 cnn-RL FBtr0309891 5012 cnn-RM FBtr0309892 4399 cnn-RN FBtr0309893 4310
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) cnn-PI FBpp0301622 500
Derived from OTHER transcripts	Name FlyBase ID Length (aa) cnn-PA FBpp0086822 1148 cnn-PB FBpp0086823 1120 cnn-PD FBpp0100116 1090 cnn-PE FBpp0100117 1130 cnn-PG FBpp0290609 480 cnn-PH FBpp0297590 462 cnn-PJ FBpp0301623 1320 cnn-PK FBpp0301624 520 cnn-PL FBpp0301625 1378 cnn-PM FBpp0301626 1120 cnn-PN FBpp0301627 1120
Comments
	Corresponds to cnn9c described in FBrf0208637. Transcript terminates at site supported by polyadenylated cDNA.
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_001259362
Synonyms
	cnn-RI
References ( 2 )
FlyBase analysis	FlyBase Genome Annotators, 2005, Changes affecting gene model number or type in release 4.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 4.2 of the annotated D.melanogaster genome. [FBrf0182792] FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453]